RNA–Protein interactions for RNA: ENST00000542675.1

PDE3A-202, Transcript of phosphodiesterase 3A, humanhuman

TSL 3

Gene PDE3A, Length 685 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE3A-202ENST00000542675 SNRNP35Q16560 246 aaKnown RBP12.52□□□□□ -0.41
PDE3A-202ENST00000542675 SNX30Q5VWJ9 437 aa12.52□□□□□ -0.41
PDE3A-202ENST00000542675 ZCCHC9Q8N567 271 aaKnown RBP12.52□□□□□ -0.41
PDE3A-202ENST00000542675 PDZD8Q8NEN9 1154 aa12.52□□□□□ -0.41
PDE3A-202ENST00000542675 CGRRF1Q99675 332 aa12.52□□□□□ -0.41
PDE3A-202ENST00000542675 SMOQ99835 787 aa12.52□□□□□ -0.41
PDE3A-202ENST00000542675 GABRG3Q99928 467 aa12.52□□□□□ -0.41
PDE3A-202ENST00000542675 BBS2Q9BXC9 721 aa12.52□□□□□ -0.41
PDE3A-202ENST00000542675 KLF16Q9BXK1 252 aaPredicted RBP12.52□□□□□ -0.41
PDE3A-202ENST00000542675 CCDC86Q9H6F5 360 aaKnown RBP12.52□□□□□ -0.41
PDE3A-202ENST00000542675 OSER1Q9NX31 292 aa12.52□□□□□ -0.41
PDE3A-202ENST00000542675 SLCO1B1Q9Y6L6 691 aa12.52□□□□□ -0.41
PDE3A-202ENST00000542675 KIAA0391O15091 583 aaKnown RBP12.51□□□□□ -0.41
PDE3A-202ENST00000542675 CACNG3O60359 315 aa12.51□□□□□ -0.41
PDE3A-202ENST00000542675 TLR5O60602 858 aa12.51□□□□□ -0.41
PDE3A-202ENST00000542675 ZNF217O75362 1048 aa12.51□□□□□ -0.41
PDE3A-202ENST00000542675 AP1G2O75843 785 aa12.51□□□□□ -0.41
PDE3A-202ENST00000542675 CCDC130P13994 396 aa12.51□□□□□ -0.41
PDE3A-202ENST00000542675 GUCA2AQ02747 115 aa12.51□□□□□ -0.41
PDE3A-202ENST00000542675 PSMD6Q15008 389 aa12.51□□□□□ -0.41
PDE3A-202ENST00000542675 HTR3DQ70Z44 454 aa12.51□□□□□ -0.41
PDE3A-202ENST00000542675 EPM2AIP1Q7L775 607 aaPredicted RBP12.51□□□□□ -0.41
PDE3A-202ENST00000542675 GPRIN1Q7Z2K8 1008 aa12.51□□□□□ -0.41
PDE3A-202ENST00000542675 RABEPKQ7Z6M1 372 aa12.51□□□□□ -0.41
PDE3A-202ENST00000542675 ACOT1Q86TX2 421 aa12.51□□□□□ -0.41
PDE3A-202ENST00000542675 CACUL1Q86Y37 369 aa12.51□□□□□ -0.41
PDE3A-202ENST00000542675 NELFCDQ8IXH7 590 aa12.51□□□□□ -0.41
PDE3A-202ENST00000542675 FUKQ8N0W3 1084 aa12.51□□□□□ -0.41
PDE3A-202ENST00000542675 SETD7Q8WTS6 366 aaKnown RBP12.51□□□□□ -0.41
PDE3A-202ENST00000542675 OVCA2Q8WZ82 227 aa12.51□□□□□ -0.41
PDE3A-202ENST00000542675 TOE1Q96GM8 510 aaKnown RBP12.51□□□□□ -0.41
PDE3A-202ENST00000542675 LRIG1Q96JA1 1093 aa12.51□□□□□ -0.41
PDE3A-202ENST00000542675 GPR174Q9BXC1 333 aa12.51□□□□□ -0.41
PDE3A-202ENST00000542675 MIR1-1HGQ9H1L0 117 aa12.51□□□□□ -0.41
PDE3A-202ENST00000542675 KRT82Q9NSB4 513 aa12.51□□□□□ -0.41
PDE3A-202ENST00000542675 TOR4AQ9NXH8 423 aa12.51□□□□□ -0.41
PDE3A-202ENST00000542675 HMGXB4Q9UGU5 601 aa12.51□□□□□ -0.41
PDE3A-202ENST00000542675 PCOLCE2Q9UKZ9 415 aa12.51□□□□□ -0.41
PDE3A-202ENST00000542675 PTPRQQ9UMZ3 2332 aa12.51□□□□□ -0.41
PDE3A-202ENST00000542675 FAM92AA1XBS5 289 aa12.5□□□□□ -0.41
PDE3A-202ENST00000542675 ATXN1LP0C7T5 689 aaKnown RBP12.5□□□□□ -0.41
PDE3A-202ENST00000542675 CASP1P29466 404 aa12.5□□□□□ -0.41
PDE3A-202ENST00000542675 SLC14A1Q13336 389 aa12.5□□□□□ -0.41
PDE3A-202ENST00000542675 TRPC3Q13507 836 aa12.5□□□□□ -0.41
PDE3A-202ENST00000542675 HNRNPDQ14103 355 aaKnown RBP12.5□□□□□ -0.41
PDE3A-202ENST00000542675 FUT11Q495W5 492 aa12.5□□□□□ -0.41
PDE3A-202ENST00000542675 SDE2Q6IQ49 451 aa12.5□□□□□ -0.41
PDE3A-202ENST00000542675 BRICD5Q6PL45 260 aa12.5□□□□□ -0.41
PDE3A-202ENST00000542675 CCDC73Q6ZRK6 1079 aa12.5□□□□□ -0.41
PDE3A-202ENST00000542675 CCDC65Q8IXS2 484 aa12.5□□□□□ -0.41
PDE3A-202ENST00000542675 ZNF507Q8TCN5 953 aa12.5□□□□□ -0.41
PDE3A-202ENST00000542675 SCFD1Q8WVM8 642 aa12.5□□□□□ -0.41
PDE3A-202ENST00000542675 JAKMIP2Q96AA8 810 aa12.5□□□□□ -0.41
PDE3A-202ENST00000542675 USP28Q96RU2 1077 aa12.5□□□□□ -0.41
PDE3A-202ENST00000542675 MKRN2Q9H000 416 aaKnown RBP12.5□□□□□ -0.41
PDE3A-202ENST00000542675 NACA2Q9H009 215 aa12.5□□□□□ -0.41
PDE3A-202ENST00000542675 NMUR1Q9HB89 426 aa12.5□□□□□ -0.41
PDE3A-202ENST00000542675 DMAP1Q9NPF5 467 aaPredicted RBP12.5□□□□□ -0.41
PDE3A-202ENST00000542675 AGPAT3Q9NRZ7 376 aa12.5□□□□□ -0.41
PDE3A-202ENST00000542675 WSB2Q9NYS7 404 aaPredicted RBP12.5□□□□□ -0.41
PDE3A-202ENST00000542675 BTBD3Q9Y2F9 522 aa12.5□□□□□ -0.41
PDE3A-202ENST00000542675 FNDC3AQ9Y2H6 1198 aaKnown RBP12.5□□□□□ -0.41
PDE3A-202ENST00000542675 STON1Q9Y6Q2 735 aa12.5□□□□□ -0.41
PDE3A-202ENST00000542675 ARID1BQ8NFD5 2236 aaPredicted RBP12.5□□□□□ -0.41
PDE3A-202ENST00000542675 MEI4A8MW99 385 aa12.49□□□□□ -0.41
PDE3A-202ENST00000542675 CYP26A1O43174 497 aa12.49□□□□□ -0.41
PDE3A-202ENST00000542675 VNN1O95497 513 aa12.49□□□□□ -0.41
PDE3A-202ENST00000542675 FAM163BP0C2L3 166 aa12.49□□□□□ -0.41
PDE3A-202ENST00000542675 NCAM1P13591 858 aa12.49□□□□□ -0.41
PDE3A-202ENST00000542675 CD6P30203 668 aa12.49□□□□□ -0.41
PDE3A-202ENST00000542675 TXLNAP40222 546 aa12.49□□□□□ -0.41
PDE3A-202ENST00000542675 IL12RB1P42701 662 aa12.49□□□□□ -0.41
PDE3A-202ENST00000542675 DGKGP49619 791 aa12.49□□□□□ -0.41
PDE3A-202ENST00000542675 TUBP50607 506 aa12.49□□□□□ -0.41
PDE3A-202ENST00000542675 MAP3K7CLP57077 242 aa12.49□□□□□ -0.41
PDE3A-202ENST00000542675 SYCP2LQ5T4T6 812 aa12.49□□□□□ -0.41
PDE3A-202ENST00000542675 DCAF12L1Q5VU92 463 aa12.49□□□□□ -0.41
PDE3A-202ENST00000542675 LIAT1Q6ZQX7 453 aa12.49□□□□□ -0.41
PDE3A-202ENST00000542675 C12orf29Q8N999 325 aa12.49□□□□□ -0.41
PDE3A-202ENST00000542675 SLC2A14Q8TDB8 520 aa12.49□□□□□ -0.41
PDE3A-202ENST00000542675 DNASE2BQ8WZ79 361 aa12.49□□□□□ -0.41
PDE3A-202ENST00000542675 SMARCD1Q96GM5 515 aa12.49□□□□□ -0.41
PDE3A-202ENST00000542675 XPO6Q96QU8 1125 aaKnown RBP12.49□□□□□ -0.41
PDE3A-202ENST00000542675 DUSP9Q99956 384 aaKnown RBP12.49□□□□□ -0.41
PDE3A-202ENST00000542675 FAM124BQ9H5Z6 455 aaPredicted RBP12.49□□□□□ -0.41
PDE3A-202ENST00000542675 GAREM1Q9H706 876 aa12.49□□□□□ -0.41
PDE3A-202ENST00000542675 PRDM16Q9HAZ2 1276 aa12.49□□□□□ -0.41
PDE3A-202ENST00000542675 FAM49BQ9NUQ9 324 aa12.49□□□□□ -0.41
PDE3A-202ENST00000542675 MARK1Q9P0L2 795 aa12.49□□□□□ -0.41
PDE3A-202ENST00000542675 MUC22E2RYF6 1773 aaPredicted RBP12.48□□□□□ -0.41
PDE3A-202ENST00000542675 A0A1B0GTW7 788 aa12.48□□□□□ -0.41
PDE3A-202ENST00000542675 FAM149AA5PLN7 773 aa12.48□□□□□ -0.41
PDE3A-202ENST00000542675 ZBTB24O43167 697 aaPredicted RBP12.48□□□□□ -0.41
PDE3A-202ENST00000542675 PHACTR2O75167 634 aa12.48□□□□□ -0.41
PDE3A-202ENST00000542675 CILPO75339 1184 aa12.48□□□□□ -0.41
PDE3A-202ENST00000542675 CLSTN1O94985 981 aa12.48□□□□□ -0.41
PDE3A-202ENST00000542675 GNSP15586 552 aa12.48□□□□□ -0.41
PDE3A-202ENST00000542675 CYP4F3Q08477 520 aa12.48□□□□□ -0.41
PDE3A-202ENST00000542675 GEN1Q17RS7 908 aa12.48□□□□□ -0.41
PDE3A-202ENST00000542675 ZNF699Q32M78 642 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms