RNA–Protein interactions for RNA: ENST00000542541.6

HOMER3-205, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,607 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-205ENST00000542541 RNF10Q8N5U6 811 aaKnown RBP24.1■■□□□ 1.45
HOMER3-205ENST00000542541 PGAP3Q96FM1 320 aaPredicted RBP24.1■■□□□ 1.45
HOMER3-205ENST00000542541 SFMBT1Q9UHJ3 866 aa24.1■■□□□ 1.45
HOMER3-205ENST00000542541 RNF8O76064 485 aa24.09■■□□□ 1.45
HOMER3-205ENST00000542541 WEE1P30291 646 aa24.09■■□□□ 1.45
HOMER3-205ENST00000542541 ATP11AP98196 1134 aa24.09■■□□□ 1.45
HOMER3-205ENST00000542541 NNTQ13423 1086 aa24.09■■□□□ 1.45
HOMER3-205ENST00000542541 SND1Q7KZF4 910 aaKnown RBP eCLIP24.09■■□□□ 1.45
HOMER3-205ENST00000542541 STRADAQ7RTN6 431 aa24.09■■□□□ 1.45
HOMER3-205ENST00000542541 SLC22A12Q96S37 553 aa24.09■■□□□ 1.45
HOMER3-205ENST00000542541 TRIM7Q9C029 511 aa24.09■■□□□ 1.45
HOMER3-205ENST00000542541 DDIT4Q9NX09 232 aa24.09■■□□□ 1.45
HOMER3-205ENST00000542541 HBS1LQ9Y450 684 aaKnown RBP24.09■■□□□ 1.45
HOMER3-205ENST00000542541 PAXBP1Q9Y5B6 917 aa24.09■■□□□ 1.45
HOMER3-205ENST00000542541 OGDHQ02218 1023 aa24.08■■□□□ 1.45
HOMER3-205ENST00000542541 OTOP3Q7RTS5 596 aa24.08■■□□□ 1.45
HOMER3-205ENST00000542541 TAC4Q86UU9 113 aa24.08■■□□□ 1.45
HOMER3-205ENST00000542541 CENPIQ92674 756 aaPredicted RBP24.08■■□□□ 1.45
HOMER3-205ENST00000542541 TBCBQ99426 244 aa24.08■■□□□ 1.45
HOMER3-205ENST00000542541 LZTFL1Q9NQ48 299 aa24.08■■□□□ 1.45
HOMER3-205ENST00000542541 GUCA1BQ9UMX6 200 aa24.08■■□□□ 1.45
HOMER3-205ENST00000542541 NOTCH4Q99466 2003 aa24.07■■□□□ 1.44
HOMER3-205ENST00000542541 SLC12A8A0AV02 714 aa24.07■■□□□ 1.44
HOMER3-205ENST00000542541 MACROD2A1Z1Q3 448 aa24.07■■□□□ 1.44
HOMER3-205ENST00000542541 GOLGA6L9A6NEM1 432 aa24.07■■□□□ 1.44
HOMER3-205ENST00000542541 MDM4O15151 490 aa24.07■■□□□ 1.44
HOMER3-205ENST00000542541 ENDOD1O94919 500 aa24.07■■□□□ 1.44
HOMER3-205ENST00000542541 IGLV3-25P01717 112 aa24.07■■□□□ 1.44
HOMER3-205ENST00000542541 GBP2P32456 591 aaPredicted RBP24.07■■□□□ 1.44
HOMER3-205ENST00000542541 DEUP1Q05D60 604 aa24.07■■□□□ 1.44
HOMER3-205ENST00000542541 NME3Q13232 169 aa24.07■■□□□ 1.44
HOMER3-205ENST00000542541 NIPA2Q8N8Q9 360 aa24.07■■□□□ 1.44
HOMER3-205ENST00000542541 ZSCAN18Q8TBC5 510 aaPredicted RBP24.07■■□□□ 1.44
HOMER3-205ENST00000542541 ADAM32Q8TC27 787 aa24.07■■□□□ 1.44
HOMER3-205ENST00000542541 FAM172AQ8WUF8 416 aa24.07■■□□□ 1.44
HOMER3-205ENST00000542541 ZSWIM3Q96MP5 696 aa24.07■■□□□ 1.44
HOMER3-205ENST00000542541 ARHGAP26Q9UNA1 814 aa24.07■■□□□ 1.44
HOMER3-205ENST00000542541 USTQ9Y2C2 406 aa24.07■■□□□ 1.44
HOMER3-205ENST00000542541 TLR6Q9Y2C9 796 aa24.07■■□□□ 1.44
HOMER3-205ENST00000542541 DOCK6Q96HP0 2047 aa24.07■■□□□ 1.44
HOMER3-205ENST00000542541 C2orf16Q68DN1 1984 aa24.06■■□□□ 1.44
HOMER3-205ENST00000542541 A0A0U1RQJ8 604 aa24.06■■□□□ 1.44
HOMER3-205ENST00000542541 IRAK2O43187 625 aa24.06■■□□□ 1.44
HOMER3-205ENST00000542541 BUB1O43683 1085 aa24.06■■□□□ 1.44
HOMER3-205ENST00000542541 PROSCO94903 275 aa24.06■■□□□ 1.44
HOMER3-205ENST00000542541 SLC2A3P11169 496 aa24.06■■□□□ 1.44
HOMER3-205ENST00000542541 RDXP35241 583 aaKnown RBP24.06■■□□□ 1.44
HOMER3-205ENST00000542541 PITX1P78337 314 aaPredicted RBP24.06■■□□□ 1.44
HOMER3-205ENST00000542541 MESDQ14696 234 aa24.06■■□□□ 1.44
HOMER3-205ENST00000542541 TRIP4Q15650 581 aaPredicted RBP24.06■■□□□ 1.44
HOMER3-205ENST00000542541 CDO1Q16878 200 aa24.06■■□□□ 1.44
HOMER3-205ENST00000542541 C15orf59Q2T9L4 293 aaPredicted RBP24.06■■□□□ 1.44
HOMER3-205ENST00000542541 DDX42Q86XP3 938 aaKnown RBP eCLIP24.06■■□□□ 1.44
HOMER3-205ENST00000542541 ARID3BQ8IVW6 561 aaPredicted RBP24.06■■□□□ 1.44
HOMER3-205ENST00000542541 GADD45GIP1Q8TAE8 222 aaPredicted RBP24.06■■□□□ 1.44
HOMER3-205ENST00000542541 ATRIPQ8WXE1 791 aa24.06■■□□□ 1.44
HOMER3-205ENST00000542541 ACSF2Q96CM8 615 aaPredicted RBP24.06■■□□□ 1.44
HOMER3-205ENST00000542541 BTBD6Q96KE9 485 aa24.06■■□□□ 1.44
HOMER3-205ENST00000542541 KLF16Q9BXK1 252 aaPredicted RBP24.06■■□□□ 1.44
HOMER3-205ENST00000542541 TDP1Q9NUW8 608 aa24.06■■□□□ 1.44
HOMER3-205ENST00000542541 TRIM10Q9UDY6 481 aa24.06■■□□□ 1.44
HOMER3-205ENST00000542541 SALL4Q9UJQ4 1053 aa24.06■■□□□ 1.44
HOMER3-205ENST00000542541 CPQQ9Y646 472 aa24.06■■□□□ 1.44
HOMER3-205ENST00000542541 TBX4P57082 545 aa24.06■■□□□ 1.44
HOMER3-205ENST00000542541 RING1Q06587 406 aa24.06■■□□□ 1.44
HOMER3-205ENST00000542541 ZNF252P-AS1Q0IIN9 211 aa24.06■■□□□ 1.44
HOMER3-205ENST00000542541 SMAD2Q15796 467 aaKnown RBP24.06■■□□□ 1.44
HOMER3-205ENST00000542541 BNIPLQ7Z465 357 aa24.06■■□□□ 1.44
HOMER3-205ENST00000542541 CCAR2Q8N163 923 aaKnown RBP24.06■■□□□ 1.44
HOMER3-205ENST00000542541 TPCN2Q8NHX9 752 aa24.06■■□□□ 1.44
HOMER3-205ENST00000542541 SMARCD2Q92925 531 aa24.06■■□□□ 1.44
HOMER3-205ENST00000542541 RNF34Q969K3 372 aa24.06■■□□□ 1.44
HOMER3-205ENST00000542541 TRMT1Q9NXH9 659 aaKnown RBP24.06■■□□□ 1.44
HOMER3-205ENST00000542541 SYNJ2BP-COX16A0A087WUM0 186 aa24.05■■□□□ 1.44
HOMER3-205ENST00000542541 MSI1O43347 362 aaKnown RBP24.05■■□□□ 1.44
HOMER3-205ENST00000542541 TFE3P19532 575 aaPredicted RBP24.05■■□□□ 1.44
HOMER3-205ENST00000542541 MAN1A1P33908 653 aa24.05■■□□□ 1.44
HOMER3-205ENST00000542541 AAK1Q2M2I8 961 aa24.05■■□□□ 1.44
HOMER3-205ENST00000542541 PTCRAQ6ISU1 281 aaPredicted RBP24.05■■□□□ 1.44
HOMER3-205ENST00000542541 REXO1L1PQ8IX06 675 aa24.05■■□□□ 1.44
HOMER3-205ENST00000542541 PLD4Q96BZ4 506 aa24.05■■□□□ 1.44
HOMER3-205ENST00000542541 MYADMQ96S97 322 aa24.05■■□□□ 1.44
HOMER3-205ENST00000542541 KIF9Q9HAQ2 790 aa24.05■■□□□ 1.44
HOMER3-205ENST00000542541 SLTMQ9NWH9 1034 aaKnown RBP eCLIP24.05■■□□□ 1.44
HOMER3-205ENST00000542541 SMPD4Q9NXE4 827 aa24.05■■□□□ 1.44
HOMER3-205ENST00000542541 COX16Q9P0S2 106 aa24.05■■□□□ 1.44
HOMER3-205ENST00000542541 LAMP2P13473 410 aa24.04■■□□□ 1.44
HOMER3-205ENST00000542541 CCR1P32246 355 aa24.04■■□□□ 1.44
HOMER3-205ENST00000542541 SLC1A1P43005 524 aa24.04■■□□□ 1.44
HOMER3-205ENST00000542541 CXCR3P49682 368 aa24.04■■□□□ 1.44
HOMER3-205ENST00000542541 MTA1Q13330 715 aa24.04■■□□□ 1.44
HOMER3-205ENST00000542541 EIF4EBP2Q13542 120 aaPredicted RBP24.04■■□□□ 1.44
HOMER3-205ENST00000542541 FAM78AQ5JUQ0 283 aa24.04■■□□□ 1.44
HOMER3-205ENST00000542541 SH3PXD2AQ5TCZ1 1133 aa24.04■■□□□ 1.44
HOMER3-205ENST00000542541 NUGGCQ68CJ6 796 aa24.04■■□□□ 1.44
HOMER3-205ENST00000542541 C11orf63Q6NUN7 778 aa24.04■■□□□ 1.44
HOMER3-205ENST00000542541 UNC45BQ8IWX7 931 aa24.04■■□□□ 1.44
HOMER3-205ENST00000542541 CELF5Q8N6W0 485 aaKnown RBP24.04■■□□□ 1.44
HOMER3-205ENST00000542541 KIAA1524Q8TCG1 905 aa24.04■■□□□ 1.44
HOMER3-205ENST00000542541 USP13Q92995 863 aaPredicted RBP24.04■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms