RNA–Protein interactions for RNA: ENST00000542199.1

MRPS35-204, Transcript of mitochondrial ribosomal protein S35, humanhuman

TSL 3

Gene MRPS35, Length 750 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS35-204ENST00000542199 ZNF185O15231 689 aa9.39□□□□□ -0.91
MRPS35-204ENST00000542199 FRS3O43559 492 aa9.39□□□□□ -0.91
MRPS35-204ENST00000542199 MGEA5O60502 916 aa9.39□□□□□ -0.91
MRPS35-204ENST00000542199 HOXC6P09630 235 aa9.39□□□□□ -0.91
MRPS35-204ENST00000542199 RARBP10826 455 aa9.39□□□□□ -0.91
MRPS35-204ENST00000542199 FCER1AP12319 257 aa9.39□□□□□ -0.91
MRPS35-204ENST00000542199 MYF5P13349 255 aa9.39□□□□□ -0.91
MRPS35-204ENST00000542199 ZKSCAN1P17029 563 aaPredicted RBP9.39□□□□□ -0.91
MRPS35-204ENST00000542199 ZNF135P52742 658 aaPredicted RBP9.39□□□□□ -0.91
MRPS35-204ENST00000542199 RNASE9P60153 205 aaKnown RBP9.39□□□□□ -0.91
MRPS35-204ENST00000542199 ICA1Q05084 483 aa9.39□□□□□ -0.91
MRPS35-204ENST00000542199 GRB14Q14449 540 aa9.39□□□□□ -0.91
MRPS35-204ENST00000542199 CRB2Q5IJ48 1285 aa9.39□□□□□ -0.91
MRPS35-204ENST00000542199 TSHZ3Q63HK5 1081 aa9.39□□□□□ -0.91
MRPS35-204ENST00000542199 CTR9Q6PD62 1173 aa9.39□□□□□ -0.91
MRPS35-204ENST00000542199 PALM2Q8IXS6 379 aa9.39□□□□□ -0.91
MRPS35-204ENST00000542199 KBTBD3Q8NAB2 608 aa9.39□□□□□ -0.91
MRPS35-204ENST00000542199 CHST13Q8NET6 341 aa9.39□□□□□ -0.91
MRPS35-204ENST00000542199 PARD3BQ8TEW8 1205 aa9.39□□□□□ -0.91
MRPS35-204ENST00000542199 LPAR1Q92633 364 aa9.39□□□□□ -0.91
MRPS35-204ENST00000542199 CCDC17Q96LX7 622 aa9.39□□□□□ -0.91
MRPS35-204ENST00000542199 STRBPQ96SI9 672 aaKnown RBP9.39□□□□□ -0.91
MRPS35-204ENST00000542199 VKORC1Q9BQB6 163 aa9.39□□□□□ -0.91
MRPS35-204ENST00000542199 PRO3102Q9H379 93 aa9.39□□□□□ -0.91
MRPS35-204ENST00000542199 MRPS18AQ9NVS2 196 aaKnown RBP9.39□□□□□ -0.91
MRPS35-204ENST00000542199 PIH1D1Q9NWS0 290 aaKnown RBP9.39□□□□□ -0.91
MRPS35-204ENST00000542199 OGDHLQ9ULD0 1010 aa9.39□□□□□ -0.91
MRPS35-204ENST00000542199 TMX2Q9Y320 296 aa9.39□□□□□ -0.91
MRPS35-204ENST00000542199 SLC4A4Q9Y6R1 1079 aa9.39□□□□□ -0.91
MRPS35-204ENST00000542199 PLXNB2O15031 1838 aa9.38□□□□□ -0.91
MRPS35-204ENST00000542199 SLC15A5A6NIM6 579 aa9.38□□□□□ -0.91
MRPS35-204ENST00000542199 GRXCR1A8MXD5 290 aa9.38□□□□□ -0.91
MRPS35-204ENST00000542199 GCSHP23434 173 aa9.38□□□□□ -0.91
MRPS35-204ENST00000542199 COG2Q14746 738 aa9.38□□□□□ -0.91
MRPS35-204ENST00000542199 CCL14Q16627 93 aa9.38□□□□□ -0.91
MRPS35-204ENST00000542199 SBK1Q52WX2 424 aa9.38□□□□□ -0.91
MRPS35-204ENST00000542199 SLC17A8Q8NDX2 589 aa9.38□□□□□ -0.91
MRPS35-204ENST00000542199 APIPQ96GX9 242 aa9.38□□□□□ -0.91
MRPS35-204ENST00000542199 TRIM54Q9BYV2 358 aa9.38□□□□□ -0.91
MRPS35-204ENST00000542199 IMPG2Q9BZV3 1241 aa9.38□□□□□ -0.91
MRPS35-204ENST00000542199 KLC2Q9H0B6 622 aa9.38□□□□□ -0.91
MRPS35-204ENST00000542199 SH2D4AQ9H788 454 aa9.38□□□□□ -0.91
MRPS35-204ENST00000542199 VCPKMTQ9H867 229 aa9.38□□□□□ -0.91
MRPS35-204ENST00000542199 RLIMQ9NVW2 624 aa9.38□□□□□ -0.91
MRPS35-204ENST00000542199 HOXC10Q9NYD6 342 aa9.38□□□□□ -0.91
MRPS35-204ENST00000542199 ARPP21Q9UBL0 812 aaPredicted RBP9.38□□□□□ -0.91
MRPS35-204ENST00000542199 CPNE7Q9UBL6 633 aa9.38□□□□□ -0.91
MRPS35-204ENST00000542199 USP15Q9Y4E8 981 aaPredicted RBP9.38□□□□□ -0.91
MRPS35-204ENST00000542199 TTC41PQ6P2S7 1318 aa9.37□□□□□ -0.91
MRPS35-204ENST00000542199 KRTAP23-1A1A580 65 aa9.37□□□□□ -0.91
MRPS35-204ENST00000542199 RNF113AO15541 343 aaKnown RBP9.37□□□□□ -0.91
MRPS35-204ENST00000542199 FOXD2O60548 495 aaPredicted RBP9.37□□□□□ -0.91
MRPS35-204ENST00000542199 ZFYP08048 801 aaPredicted RBP9.37□□□□□ -0.91
MRPS35-204ENST00000542199 KCNJ5P48544 419 aa9.37□□□□□ -0.91
MRPS35-204ENST00000542199 RRP1P56182 461 aaKnown RBP9.37□□□□□ -0.91
MRPS35-204ENST00000542199 AGAP9Q5VTM2 703 aa9.37□□□□□ -0.91
MRPS35-204ENST00000542199 PDSS2Q86YH6 399 aa9.37□□□□□ -0.91
MRPS35-204ENST00000542199 SPICE1Q8N0Z3 855 aa9.37□□□□□ -0.91
MRPS35-204ENST00000542199 KRT78Q8N1N4 520 aa9.37□□□□□ -0.91
MRPS35-204ENST00000542199 TTC9BQ8N6N2 239 aa9.37□□□□□ -0.91
MRPS35-204ENST00000542199 SVIPQ8NHG7 77 aa9.37□□□□□ -0.91
MRPS35-204ENST00000542199 MARS2Q96GW9 593 aaKnown RBP9.37□□□□□ -0.91
MRPS35-204ENST00000542199 SLC39A13Q96H72 371 aa9.37□□□□□ -0.91
MRPS35-204ENST00000542199 ZSWIM1Q9BR11 485 aa9.37□□□□□ -0.91
MRPS35-204ENST00000542199 MOV10L1Q9BXT6 1211 aaKnown RBP9.37□□□□□ -0.91
MRPS35-204ENST00000542199 KRTAP3-1Q9BYR8 98 aa9.37□□□□□ -0.91
MRPS35-204ENST00000542199 LRRC27Q9C0I9 530 aa9.37□□□□□ -0.91
MRPS35-204ENST00000542199 SPATC1LQ9H0A9 340 aa9.37□□□□□ -0.91
MRPS35-204ENST00000542199 SMPD4Q9NXE4 827 aa9.37□□□□□ -0.91
MRPS35-204ENST00000542199 VSX1Q9NZR4 365 aaPredicted RBP9.37□□□□□ -0.91
MRPS35-204ENST00000542199 FLRT1Q9NZU1 646 aa9.37□□□□□ -0.91
MRPS35-204ENST00000542199 EIF2B4Q9UI10 523 aaKnown RBP9.37□□□□□ -0.91
MRPS35-204ENST00000542199 SORCS3Q9UPU3 1222 aa9.37□□□□□ -0.91
MRPS35-204ENST00000542199 CORO2BQ9UQ03 480 aa9.37□□□□□ -0.91
MRPS35-204ENST00000542199 CDYLQ9Y232 598 aa9.37□□□□□ -0.91
MRPS35-204ENST00000542199 CHST2Q9Y4C5 530 aa9.37□□□□□ -0.91
MRPS35-204ENST00000542199 ROBO3Q96MS0 1386 aa9.37□□□□□ -0.91
MRPS35-204ENST00000542199 WDR46O15213 610 aaKnown RBP9.36□□□□□ -0.91
MRPS35-204ENST00000542199 GPAA1O43292 621 aa9.36□□□□□ -0.91
MRPS35-204ENST00000542199 DNAJB5O75953 348 aa9.36□□□□□ -0.91
MRPS35-204ENST00000542199 FLOT1O75955 427 aa9.36□□□□□ -0.91
MRPS35-204ENST00000542199 CKBP12277 381 aa9.36□□□□□ -0.91
MRPS35-204ENST00000542199 EEF2P13639 858 aaKnown RBP9.36□□□□□ -0.91
MRPS35-204ENST00000542199 BRAFP15056 766 aa9.36□□□□□ -0.91
MRPS35-204ENST00000542199 ACRV1P26436 265 aa9.36□□□□□ -0.91
MRPS35-204ENST00000542199 ARFIP2P53365 341 aa9.36□□□□□ -0.91
MRPS35-204ENST00000542199 SUMO3P55854 103 aaPredicted RBP9.36□□□□□ -0.91
MRPS35-204ENST00000542199 RHOT2Q8IXI1 618 aa9.36□□□□□ -0.91
MRPS35-204ENST00000542199 PDPRQ8NCN5 879 aa9.36□□□□□ -0.91
MRPS35-204ENST00000542199 OR56A1Q8NGH5 318 aa9.36□□□□□ -0.91
MRPS35-204ENST00000542199 OTUD7AQ8TE49 926 aaPredicted RBP9.36□□□□□ -0.91
MRPS35-204ENST00000542199 TINAGL1Q9GZM7 467 aaPredicted RBP9.36□□□□□ -0.91
MRPS35-204ENST00000542199 GPR35Q9HC97 309 aa9.36□□□□□ -0.91
MRPS35-204ENST00000542199 KLHL11Q9NVR0 708 aa9.36□□□□□ -0.91
MRPS35-204ENST00000542199 PHTF1Q9UMS5 762 aa9.36□□□□□ -0.91
MRPS35-204ENST00000542199 ADAMTS5Q9UNA0 930 aa9.36□□□□□ -0.91
MRPS35-204ENST00000542199 MED16Q9Y2X0 877 aa9.36□□□□□ -0.91
MRPS35-204ENST00000542199 CDH23Q9H251 3354 aa9.36□□□□□ -0.91
MRPS35-204ENST00000542199 PFASO15067 1338 aa9.35□□□□□ -0.91
MRPS35-204ENST00000542199 SALL3Q9BXA9 1300 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms