RNA–Protein interactions for RNA: ENST00000542040.1

TRPT1-212, Transcript of tRNA phosphotransferase 1, humanhuman

TSL 2

Gene TRPT1, Length 914 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPT1-212ENST00000542040 KCNH2Q12809 1159 aa18.28■□□□□ 0.52
TRPT1-212ENST00000542040 TPD52L1Q16890 204 aaPredicted RBP18.28■□□□□ 0.52
TRPT1-212ENST00000542040 Q6ZNB5 142 aa18.28■□□□□ 0.52
TRPT1-212ENST00000542040 CREBRFQ8IUR6 639 aa18.28■□□□□ 0.52
TRPT1-212ENST00000542040 ZNF557Q8N988 423 aaPredicted RBP18.28■□□□□ 0.52
TRPT1-212ENST00000542040 HMGB4Q8WW32 186 aa18.28■□□□□ 0.52
TRPT1-212ENST00000542040 IRGQQ8WZA9 623 aa18.28■□□□□ 0.52
TRPT1-212ENST00000542040 HSFY1Q96LI6 401 aa18.28■□□□□ 0.52
TRPT1-212ENST00000542040 SLC2A11Q9BYW1 496 aa18.28■□□□□ 0.52
TRPT1-212ENST00000542040 TPSD1Q9BZJ3 242 aa18.28■□□□□ 0.52
TRPT1-212ENST00000542040 ULBP1Q9BZM6 244 aa18.28■□□□□ 0.52
TRPT1-212ENST00000542040 OTOGLQ3ZCN5 2332 aa18.27■□□□□ 0.52
TRPT1-212ENST00000542040 GVINP1Q7Z2Y8 2422 aa18.27■□□□□ 0.52
TRPT1-212ENST00000542040 MDM4O15151 490 aa18.27■□□□□ 0.52
TRPT1-212ENST00000542040 SART1O43290 800 aaKnown RBP18.27■□□□□ 0.52
TRPT1-212ENST00000542040 TIMM44O43615 452 aa18.27■□□□□ 0.52
TRPT1-212ENST00000542040 GREM1O60565 184 aa18.27■□□□□ 0.52
TRPT1-212ENST00000542040 HMBSP08397 361 aa18.27■□□□□ 0.52
TRPT1-212ENST00000542040 CD44P16070 742 aaKnown RBP18.27■□□□□ 0.52
TRPT1-212ENST00000542040 ADIGQ0VDE8 80 aa18.27■□□□□ 0.52
TRPT1-212ENST00000542040 STARD3Q14849 445 aa18.27■□□□□ 0.52
TRPT1-212ENST00000542040 MPPE1Q53F39 396 aa18.27■□□□□ 0.52
TRPT1-212ENST00000542040 EMC10Q5UCC4 262 aa18.27■□□□□ 0.52
TRPT1-212ENST00000542040 PMS2CLQ68D20 193 aa18.27■□□□□ 0.52
TRPT1-212ENST00000542040 SMYD5Q6GMV2 418 aa18.27■□□□□ 0.52
TRPT1-212ENST00000542040 CYP2U1Q7Z449 544 aa18.27■□□□□ 0.52
TRPT1-212ENST00000542040 UNC45BQ8IWX7 931 aa18.27■□□□□ 0.52
TRPT1-212ENST00000542040 PHTF2Q8N3S3 785 aa18.27■□□□□ 0.52
TRPT1-212ENST00000542040 CPXM2Q8N436 756 aa18.27■□□□□ 0.52
TRPT1-212ENST00000542040 MDGA1Q8NFP4 955 aa18.27■□□□□ 0.52
TRPT1-212ENST00000542040 UBA3Q8TBC4 463 aa18.27■□□□□ 0.52
TRPT1-212ENST00000542040 DDI1Q8WTU0 396 aa18.27■□□□□ 0.52
TRPT1-212ENST00000542040 POLR3BQ9NW08 1133 aaPredicted RBP18.27■□□□□ 0.52
TRPT1-212ENST00000542040 KIAA1468Q9P260 1216 aa18.27■□□□□ 0.52
TRPT1-212ENST00000542040 RWDD2AQ9UIY3 292 aa18.27■□□□□ 0.52
TRPT1-212ENST00000542040 MYH10P35580 1976 aa18.26■□□□□ 0.51
TRPT1-212ENST00000542040 BCLAF3A2AJT9 711 aaKnown RBP18.26■□□□□ 0.51
TRPT1-212ENST00000542040 O00370 1275 aa18.26■□□□□ 0.51
TRPT1-212ENST00000542040 KHNYNO15037 678 aaKnown RBP18.26■□□□□ 0.51
TRPT1-212ENST00000542040 AP5Z1O43299 807 aa18.26■□□□□ 0.51
TRPT1-212ENST00000542040 LATS1O95835 1130 aa18.26■□□□□ 0.51
TRPT1-212ENST00000542040 LCP1P13796 627 aa18.26■□□□□ 0.51
TRPT1-212ENST00000542040 ACADSBP45954 432 aa18.26■□□□□ 0.51
TRPT1-212ENST00000542040 DHPSP49366 369 aaPredicted RBP18.26■□□□□ 0.51
TRPT1-212ENST00000542040 MFAP3P55082 362 aa18.26■□□□□ 0.51
TRPT1-212ENST00000542040 STX17P56962 302 aa18.26■□□□□ 0.51
TRPT1-212ENST00000542040 PLA2G2CQ5R387 149 aa18.26■□□□□ 0.51
TRPT1-212ENST00000542040 BSPRYQ5W0U4 402 aa18.26■□□□□ 0.51
TRPT1-212ENST00000542040 TMEM92Q6UXU6 159 aa18.26■□□□□ 0.51
TRPT1-212ENST00000542040 RABEPKQ7Z6M1 372 aa18.26■□□□□ 0.51
TRPT1-212ENST00000542040 DENND1CQ8IV53 801 aa18.26■□□□□ 0.51
TRPT1-212ENST00000542040 TRIM59Q8IWR1 403 aa18.26■□□□□ 0.51
TRPT1-212ENST00000542040 DDX50Q9BQ39 737 aaKnown RBP18.26■□□□□ 0.51
TRPT1-212ENST00000542040 IRX2Q9BZI1 471 aaPredicted RBP18.26■□□□□ 0.51
TRPT1-212ENST00000542040 DACH1Q9UI36 760 aa18.26■□□□□ 0.51
TRPT1-212ENST00000542040 SLC27A6Q9Y2P4 619 aa18.26■□□□□ 0.51
TRPT1-212ENST00000542040 TYW5A2RUC4 315 aaKnown RBP18.25■□□□□ 0.51
TRPT1-212ENST00000542040 M0QYV0 167 aa18.25■□□□□ 0.51
TRPT1-212ENST00000542040 DCLK1O15075 740 aa18.25■□□□□ 0.51
TRPT1-212ENST00000542040 GADD45BO75293 160 aaPredicted RBP18.25■□□□□ 0.51
TRPT1-212ENST00000542040 KRT5P13647 590 aa18.25■□□□□ 0.51
TRPT1-212ENST00000542040 P2RY2P41231 377 aa18.25■□□□□ 0.51
TRPT1-212ENST00000542040 EIF4HQ15056 248 aaKnown RBP18.25■□□□□ 0.51
TRPT1-212ENST00000542040 DAB2IPQ5VWQ8 1189 aa18.25■□□□□ 0.51
TRPT1-212ENST00000542040 FMNL3Q8IVF7 1028 aa18.25■□□□□ 0.51
TRPT1-212ENST00000542040 CCDC117Q8IWD4 279 aaPredicted RBP18.25■□□□□ 0.51
TRPT1-212ENST00000542040 FAM114A1Q8IWE2 563 aa18.25■□□□□ 0.51
TRPT1-212ENST00000542040 MLKLQ8NB16 471 aa18.25■□□□□ 0.51
TRPT1-212ENST00000542040 RBBP8NLQ8NC74 664 aaPredicted RBP18.25■□□□□ 0.51
TRPT1-212ENST00000542040 OLIG1Q8TAK6 271 aa18.25■□□□□ 0.51
TRPT1-212ENST00000542040 WBP2Q969T9 261 aa18.25■□□□□ 0.51
TRPT1-212ENST00000542040 AGO1Q9UL18 857 aaKnown RBP18.25■□□□□ 0.51
TRPT1-212ENST00000542040 INVSQ9Y283 1065 aa18.25■□□□□ 0.51
TRPT1-212ENST00000542040 DCDC2BA2VCK2 349 aa18.24■□□□□ 0.51
TRPT1-212ENST00000542040 SYNCRIPO60506 623 aaKnown RBP18.24■□□□□ 0.51
TRPT1-212ENST00000542040 ADAM23O75077 832 aa18.24■□□□□ 0.51
TRPT1-212ENST00000542040 PENKP01210 267 aaPredicted RBP18.24■□□□□ 0.51
TRPT1-212ENST00000542040 HNRNPLP14866 589 aaKnown RBP eCLIP18.24■□□□□ 0.51
TRPT1-212ENST00000542040 SLC11A2P49281 568 aa18.24■□□□□ 0.51
TRPT1-212ENST00000542040 SNX16P57768 344 aa18.24■□□□□ 0.51
TRPT1-212ENST00000542040 LMAN2Q12907 356 aa18.24■□□□□ 0.51
TRPT1-212ENST00000542040 TRIP4Q15650 581 aaPredicted RBP18.24■□□□□ 0.51
TRPT1-212ENST00000542040 NUGGCQ68CJ6 796 aa18.24■□□□□ 0.51
TRPT1-212ENST00000542040 RNF43Q68DV7 783 aa18.24■□□□□ 0.51
TRPT1-212ENST00000542040 RRAGAQ7L523 313 aa18.24■□□□□ 0.51
TRPT1-212ENST00000542040 ANKS1BQ7Z6G8 1248 aa18.24■□□□□ 0.51
TRPT1-212ENST00000542040 UBR7Q8N806 425 aa18.24■□□□□ 0.51
TRPT1-212ENST00000542040 SLC35F5Q8WV83 523 aa18.24■□□□□ 0.51
TRPT1-212ENST00000542040 BHMTQ93088 406 aa18.24■□□□□ 0.51
TRPT1-212ENST00000542040 NUSAP1Q9BXS6 441 aaKnown RBP18.24■□□□□ 0.51
TRPT1-212ENST00000542040 FBXO10Q9UK96 956 aa18.24■□□□□ 0.51
TRPT1-212ENST00000542040 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.24■□□□□ 0.51
TRPT1-212ENST00000542040 HOXC13P31276 330 aa18.23■□□□□ 0.51
TRPT1-212ENST00000542040 HOXD12P35452 270 aa18.23■□□□□ 0.51
TRPT1-212ENST00000542040 DAOAP59103 153 aa18.23■□□□□ 0.51
TRPT1-212ENST00000542040 SF3A2Q15428 464 aaKnown RBP18.23■□□□□ 0.51
TRPT1-212ENST00000542040 MEA1Q16626 185 aa18.23■□□□□ 0.51
TRPT1-212ENST00000542040 CEP76Q8TAP6 659 aa18.23■□□□□ 0.51
TRPT1-212ENST00000542040 IPO4Q8TEX9 1081 aaKnown RBP18.23■□□□□ 0.51
TRPT1-212ENST00000542040 TMA16Q96EY4 203 aaKnown RBP18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms