RNA–Protein interactions for RNA: ENST00000541576.5

THBS3-210, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 3,200 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-210ENST00000541576 PPM1AP35813 382 aa9.03□□□□□ -0.96
THBS3-210ENST00000541576 COILP38432 576 aaPredicted RBP9.03□□□□□ -0.96
THBS3-210ENST00000541576 PEX19P40855 299 aa9.03□□□□□ -0.96
THBS3-210ENST00000541576 GLUD2P49448 558 aa9.03□□□□□ -0.96
THBS3-210ENST00000541576 GPR15P49685 360 aa9.03□□□□□ -0.96
THBS3-210ENST00000541576 CDH6P55285 790 aa9.03□□□□□ -0.96
THBS3-210ENST00000541576 ROR1Q01973 937 aa9.03□□□□□ -0.96
THBS3-210ENST00000541576 SNX1Q13596 522 aa9.03□□□□□ -0.96
THBS3-210ENST00000541576 BSPRYQ5W0U4 402 aa9.03□□□□□ -0.96
THBS3-210ENST00000541576 NUP93Q8N1F7 819 aa9.03□□□□□ -0.96
THBS3-210ENST00000541576 TTC9BQ8N6N2 239 aa9.03□□□□□ -0.96
THBS3-210ENST00000541576 C12orf50Q8NA57 414 aaPredicted RBP9.03□□□□□ -0.96
THBS3-210ENST00000541576 SEPT5Q99719 369 aaPredicted RBP9.03□□□□□ -0.96
THBS3-210ENST00000541576 TRIM62Q9BVG3 475 aa9.03□□□□□ -0.96
THBS3-210ENST00000541576 HERC2P3Q9BVR0 1158 aa9.03□□□□□ -0.96
THBS3-210ENST00000541576 CALN1Q9BXU9 219 aa9.03□□□□□ -0.96
THBS3-210ENST00000541576 LRRC19Q9H756 370 aa9.03□□□□□ -0.96
THBS3-210ENST00000541576 SLC27A5Q9Y2P5 690 aa9.03□□□□□ -0.96
THBS3-210ENST00000541576 SYNJ2BP-COX16A0A087WUM0 186 aa9.03□□□□□ -0.96
THBS3-210ENST00000541576 MDM4O15151 490 aa9.03□□□□□ -0.96
THBS3-210ENST00000541576 ADAM12O43184 909 aa9.03□□□□□ -0.96
THBS3-210ENST00000541576 CDC25CP30307 473 aa9.03□□□□□ -0.96
THBS3-210ENST00000541576 OR1D2P34982 312 aa9.03□□□□□ -0.96
THBS3-210ENST00000541576 FNTAP49354 379 aa9.03□□□□□ -0.96
THBS3-210ENST00000541576 HTRA4P83105 476 aaPredicted RBP9.03□□□□□ -0.96
THBS3-210ENST00000541576 DR1Q01658 176 aa9.03□□□□□ -0.96
THBS3-210ENST00000541576 DSG1Q02413 1049 aa9.03□□□□□ -0.96
THBS3-210ENST00000541576 DHX34Q14147 1143 aaKnown RBP9.03□□□□□ -0.96
THBS3-210ENST00000541576 KRT81Q14533 505 aa9.03□□□□□ -0.96
THBS3-210ENST00000541576 TAZQ16635 292 aa9.03□□□□□ -0.96
THBS3-210ENST00000541576 MGAT5BQ3V5L5 792 aa9.03□□□□□ -0.96
THBS3-210ENST00000541576 OTUD1Q5VV17 481 aaPredicted RBP9.03□□□□□ -0.96
THBS3-210ENST00000541576 CCDC137Q6PK04 289 aaKnown RBP9.03□□□□□ -0.96
THBS3-210ENST00000541576 DDX53Q86TM3 631 aaKnown RBP9.03□□□□□ -0.96
THBS3-210ENST00000541576 MAP7D3Q8IWC1 876 aa9.03□□□□□ -0.96
THBS3-210ENST00000541576 IFT20Q8IY31 132 aa9.03□□□□□ -0.96
THBS3-210ENST00000541576 FIBCD1Q8N539 461 aa9.03□□□□□ -0.96
THBS3-210ENST00000541576 SLC7A14Q8TBB6 771 aa9.03□□□□□ -0.96
THBS3-210ENST00000541576 EDEM1Q92611 657 aa9.03□□□□□ -0.96
THBS3-210ENST00000541576 TBC1D31Q96DN5 1066 aa9.03□□□□□ -0.96
THBS3-210ENST00000541576 RUNDC3BQ96NL0 473 aa9.03□□□□□ -0.96
THBS3-210ENST00000541576 HTATIP2Q9BUP3 242 aa9.03□□□□□ -0.96
THBS3-210ENST00000541576 SNRNP25Q9BV90 132 aaKnown RBP9.03□□□□□ -0.96
THBS3-210ENST00000541576 MAGEB5Q9BZ81 275 aa9.03□□□□□ -0.96
THBS3-210ENST00000541576 DCLK3Q9C098 648 aa9.03□□□□□ -0.96
THBS3-210ENST00000541576 HOMER3Q9NSC5 361 aa9.03□□□□□ -0.96
THBS3-210ENST00000541576 GPATCH2LQ9NWQ4 482 aa9.03□□□□□ -0.96
THBS3-210ENST00000541576 RRN3Q9NYV6 651 aa9.03□□□□□ -0.96
THBS3-210ENST00000541576 COX16Q9P0S2 106 aa9.03□□□□□ -0.96
THBS3-210ENST00000541576 PCYOX1Q9UHG3 505 aa9.03□□□□□ -0.96
THBS3-210ENST00000541576 EFR3BQ9Y2G0 817 aa9.03□□□□□ -0.96
THBS3-210ENST00000541576 PCDHB12Q9Y5F1 795 aa9.03□□□□□ -0.96
THBS3-210ENST00000541576 WDR27A2RRH5 827 aa9.03□□□□□ -0.96
THBS3-210ENST00000541576 CLGNO14967 610 aa9.03□□□□□ -0.96
THBS3-210ENST00000541576 ENDOD1O94919 500 aa9.03□□□□□ -0.96
THBS3-210ENST00000541576 VNN2O95498 520 aa9.03□□□□□ -0.96
THBS3-210ENST00000541576 URODP06132 367 aa9.03□□□□□ -0.96
THBS3-210ENST00000541576 DEUP1Q05D60 604 aa9.03□□□□□ -0.96
THBS3-210ENST00000541576 DUSP4Q13115 394 aa9.03□□□□□ -0.96
THBS3-210ENST00000541576 NME3Q13232 169 aa9.03□□□□□ -0.96
THBS3-210ENST00000541576 NAA25Q14CX7 972 aa9.03□□□□□ -0.96
THBS3-210ENST00000541576 PDK2Q15119 407 aa9.03□□□□□ -0.96
THBS3-210ENST00000541576 ERMARDQ5T6L9 678 aa9.03□□□□□ -0.96
THBS3-210ENST00000541576 BNIPLQ7Z465 357 aa9.03□□□□□ -0.96
THBS3-210ENST00000541576 FAM131BQ86XD5 332 aa9.03□□□□□ -0.96
THBS3-210ENST00000541576 CCDC105Q8IYK2 499 aa9.03□□□□□ -0.96
THBS3-210ENST00000541576 STKLD1Q8NE28 680 aa9.03□□□□□ -0.96
THBS3-210ENST00000541576 CRISPLD1Q9H336 500 aa9.03□□□□□ -0.96
THBS3-210ENST00000541576 FBXO44Q9H4M3 255 aa9.03□□□□□ -0.96
THBS3-210ENST00000541576 ZMYND8Q9ULU4 1186 aaPredicted RBP9.03□□□□□ -0.96
THBS3-210ENST00000541576 INSL6Q9Y581 213 aa9.03□□□□□ -0.96
THBS3-210ENST00000541576 SOAT2O75908 522 aa9.02□□□□□ -0.97
THBS3-210ENST00000541576 HAPLN1P10915 354 aaPredicted RBP9.02□□□□□ -0.97
THBS3-210ENST00000541576 PAX7P23759 505 aa9.02□□□□□ -0.97
THBS3-210ENST00000541576 ARSEP51690 589 aa9.02□□□□□ -0.97
THBS3-210ENST00000541576 YWHAGP61981 247 aaKnown RBP eCLIP9.02□□□□□ -0.97
THBS3-210ENST00000541576 MMRN1Q13201 1228 aa9.02□□□□□ -0.97
THBS3-210ENST00000541576 DPYSL3Q14195 570 aa9.02□□□□□ -0.97
THBS3-210ENST00000541576 CA9Q16790 459 aa9.02□□□□□ -0.97
THBS3-210ENST00000541576 ZC3H12AQ5D1E8 599 aaKnown RBP9.02□□□□□ -0.97
THBS3-210ENST00000541576 DENND5BQ6ZUT9 1274 aa9.02□□□□□ -0.97
THBS3-210ENST00000541576 JAMLQ86YT9 394 aa9.02□□□□□ -0.97
THBS3-210ENST00000541576 CCDC185Q8N715 623 aa9.02□□□□□ -0.97
THBS3-210ENST00000541576 ADAM32Q8TC27 787 aa9.02□□□□□ -0.97
THBS3-210ENST00000541576 CLSTN3Q9BQT9 956 aa9.02□□□□□ -0.97
THBS3-210ENST00000541576 NFU1Q9UMS0 254 aa9.02□□□□□ -0.97
THBS3-210ENST00000541576 SLC4A7Q9Y6M7 1214 aa9.02□□□□□ -0.97
THBS3-210ENST00000541576 DAPK3O43293 454 aa9.02□□□□□ -0.97
THBS3-210ENST00000541576 RPL10AP62906 217 aaKnown RBP9.02□□□□□ -0.97
THBS3-210ENST00000541576 KRT17Q04695 432 aa9.02□□□□□ -0.97
THBS3-210ENST00000541576 CCNG2Q16589 344 aa9.02□□□□□ -0.97
THBS3-210ENST00000541576 BTBD8Q5XKL5 378 aa9.02□□□□□ -0.97
THBS3-210ENST00000541576 BEND5Q7L4P6 421 aa9.02□□□□□ -0.97
THBS3-210ENST00000541576 RFX6Q8HWS3 928 aa9.02□□□□□ -0.97
THBS3-210ENST00000541576 HERC6Q8IVU3 1022 aa9.02□□□□□ -0.97
THBS3-210ENST00000541576 CNPY4Q8N129 248 aa9.02□□□□□ -0.97
THBS3-210ENST00000541576 VPS52Q8N1B4 723 aa9.02□□□□□ -0.97
THBS3-210ENST00000541576 GPR152Q8TDT2 470 aa9.02□□□□□ -0.97
THBS3-210ENST00000541576 AENQ8WTP8 325 aaKnown RBP9.02□□□□□ -0.97
THBS3-210ENST00000541576 HERVK_113Q902F9 699 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms