RNA–Protein interactions for RNA: ENST00000540998.5

CDC42SE1-207, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDC42SE1, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-207ENST00000540998 GSRP00390 522 aa10.73□□□□□ -0.69
CDC42SE1-207ENST00000540998 NCF2P19878 526 aaPredicted RBP10.73□□□□□ -0.69
CDC42SE1-207ENST00000540998 CCR10P46092 362 aa10.73□□□□□ -0.69
CDC42SE1-207ENST00000540998 CLCN3P51790 818 aa10.73□□□□□ -0.69
CDC42SE1-207ENST00000540998 SESN2P58004 480 aaPredicted RBP10.73□□□□□ -0.69
CDC42SE1-207ENST00000540998 GHRHRQ02643 423 aa10.73□□□□□ -0.69
CDC42SE1-207ENST00000540998 STX3Q13277 289 aa10.73□□□□□ -0.69
CDC42SE1-207ENST00000540998 GK3PQ14409 553 aa10.73□□□□□ -0.69
CDC42SE1-207ENST00000540998 CMC1Q7Z7K0 106 aa10.73□□□□□ -0.69
CDC42SE1-207ENST00000540998 SCUBE3Q8IX30 993 aa10.73□□□□□ -0.69
CDC42SE1-207ENST00000540998 DEPDC1BQ8WUY9 529 aa10.73□□□□□ -0.69
CDC42SE1-207ENST00000540998 DNAJC1Q96KC8 554 aaKnown RBP10.73□□□□□ -0.69
CDC42SE1-207ENST00000540998 ACO2Q99798 780 aaKnown RBP10.73□□□□□ -0.69
CDC42SE1-207ENST00000540998 MYOZ2Q9NPC6 264 aa10.73□□□□□ -0.69
CDC42SE1-207ENST00000540998 ETAA1Q9NY74 926 aa10.73□□□□□ -0.69
CDC42SE1-207ENST00000540998 KCNK4Q9NYG8 393 aa10.73□□□□□ -0.69
CDC42SE1-207ENST00000540998 SIRPGQ9P1W8 387 aa10.73□□□□□ -0.69
CDC42SE1-207ENST00000540998 BTBD7Q9P203 1132 aa10.73□□□□□ -0.69
CDC42SE1-207ENST00000540998 CPSF2Q9P2I0 782 aaKnown RBP10.73□□□□□ -0.69
CDC42SE1-207ENST00000540998 EMCNQ9ULC0 261 aa10.73□□□□□ -0.69
CDC42SE1-207ENST00000540998 MAFBQ9Y5Q3 323 aaPredicted RBP10.73□□□□□ -0.69
CDC42SE1-207ENST00000540998 LDHAP00338 332 aaKnown RBP10.72□□□□□ -0.69
CDC42SE1-207ENST00000540998 BPGMP07738 259 aa10.72□□□□□ -0.69
CDC42SE1-207ENST00000540998 STIP1P31948 543 aaKnown RBP10.72□□□□□ -0.69
CDC42SE1-207ENST00000540998 TCF7P36402 384 aaPredicted RBP10.72□□□□□ -0.69
CDC42SE1-207ENST00000540998 RAP1GDS1P52306 607 aa10.72□□□□□ -0.69
CDC42SE1-207ENST00000540998 BCAR1P56945 870 aa10.72□□□□□ -0.69
CDC42SE1-207ENST00000540998 IGBP1P78318 339 aa10.72□□□□□ -0.69
CDC42SE1-207ENST00000540998 LAMTOR4Q0VGL1 99 aa10.72□□□□□ -0.69
CDC42SE1-207ENST00000540998 ASPHQ12797 758 aa10.72□□□□□ -0.69
CDC42SE1-207ENST00000540998 TAZQ16635 292 aa10.72□□□□□ -0.69
CDC42SE1-207ENST00000540998 AMHR2Q16671 573 aa10.72□□□□□ -0.69
CDC42SE1-207ENST00000540998 N4BP2L1Q5TBK1 243 aaPredicted RBP10.72□□□□□ -0.69
CDC42SE1-207ENST00000540998 SATL1Q86VE3 508 aa10.72□□□□□ -0.69
CDC42SE1-207ENST00000540998 RASSF3Q86WH2 238 aa10.72□□□□□ -0.69
CDC42SE1-207ENST00000540998 TP53INP2Q8IXH6 220 aa10.72□□□□□ -0.69
CDC42SE1-207ENST00000540998 TTC13Q8NBP0 860 aa10.72□□□□□ -0.69
CDC42SE1-207ENST00000540998 REPS2Q8NFH8 660 aa10.72□□□□□ -0.69
CDC42SE1-207ENST00000540998 TPP1O14773 563 aa10.72□□□□□ -0.69
CDC42SE1-207ENST00000540998 APOEP02649 317 aa10.72□□□□□ -0.69
CDC42SE1-207ENST00000540998 SERPINB6P35237 376 aa10.72□□□□□ -0.69
CDC42SE1-207ENST00000540998 PTPN11Q06124 597 aaPredicted RBP10.72□□□□□ -0.69
CDC42SE1-207ENST00000540998 CCNIQ14094 377 aa10.72□□□□□ -0.69
CDC42SE1-207ENST00000540998 CMPK2Q5EBM0 449 aa10.72□□□□□ -0.69
CDC42SE1-207ENST00000540998 PYROXD2Q8N2H3 581 aa10.72□□□□□ -0.69
CDC42SE1-207ENST00000540998 CPB2Q96IY4 423 aa10.72□□□□□ -0.69
CDC42SE1-207ENST00000540998 WWP1Q9H0M0 922 aa10.72□□□□□ -0.69
CDC42SE1-207ENST00000540998 CPSF3Q9UKF6 684 aaKnown RBP10.72□□□□□ -0.69
CDC42SE1-207ENST00000540998 TRPC5Q9UL62 973 aaPredicted RBP10.72□□□□□ -0.69
CDC42SE1-207ENST00000540998 PCDHGC3Q9UN70 934 aa10.72□□□□□ -0.69
CDC42SE1-207ENST00000540998 MRPL42Q9Y6G3 142 aaKnown RBP10.72□□□□□ -0.69
CDC42SE1-207ENST00000540998 COL2A1P02458 1487 aaPredicted RBP10.72□□□□□ -0.69
CDC42SE1-207ENST00000540998 hCG_2014768A0A024R1R8 64 aa10.71□□□□□ -0.69
CDC42SE1-207ENST00000540998 SYNJ2BP-COX16A0A087WUM0 186 aa10.71□□□□□ -0.69
CDC42SE1-207ENST00000540998 GOLGA8QA0A0J9YX86 632 aa10.71□□□□□ -0.69
CDC42SE1-207ENST00000540998 GOLGA8OA6NCC3 632 aa10.71□□□□□ -0.69
CDC42SE1-207ENST00000540998 E9PBE3 544 aa10.71□□□□□ -0.69
CDC42SE1-207ENST00000540998 GOLGA8NF8WBI6 632 aa10.71□□□□□ -0.69
CDC42SE1-207ENST00000540998 ABLIM1O14639 778 aa10.71□□□□□ -0.69
CDC42SE1-207ENST00000540998 PRPSAP2O60256 369 aa10.71□□□□□ -0.69
CDC42SE1-207ENST00000540998 ONECUT3O60422 494 aaPredicted RBP10.71□□□□□ -0.69
CDC42SE1-207ENST00000540998 KLHL41O60662 606 aa10.71□□□□□ -0.69
CDC42SE1-207ENST00000540998 HNRNPCL1O60812 293 aaKnown RBP10.71□□□□□ -0.69
CDC42SE1-207ENST00000540998 DGKIO75912 1065 aa10.71□□□□□ -0.69
CDC42SE1-207ENST00000540998 PIGRP01833 764 aa10.71□□□□□ -0.69
CDC42SE1-207ENST00000540998 CDH5P33151 784 aaPredicted RBP10.71□□□□□ -0.69
CDC42SE1-207ENST00000540998 TUBB3Q13509 450 aa10.71□□□□□ -0.69
CDC42SE1-207ENST00000540998 SPDYAQ5MJ70 313 aa10.71□□□□□ -0.69
CDC42SE1-207ENST00000540998 ANGEL2Q5VTE6 544 aaKnown RBP10.71□□□□□ -0.69
CDC42SE1-207ENST00000540998 FBXL19Q6PCT2 694 aa10.71□□□□□ -0.69
CDC42SE1-207ENST00000540998 C10orf107Q8IVU9 208 aa10.71□□□□□ -0.69
CDC42SE1-207ENST00000540998 NDRG1Q92597 394 aaKnown RBP10.71□□□□□ -0.69
CDC42SE1-207ENST00000540998 NMD3Q96D46 503 aaKnown RBP10.71□□□□□ -0.69
CDC42SE1-207ENST00000540998 RNF157Q96PX1 679 aa10.71□□□□□ -0.69
CDC42SE1-207ENST00000540998 GCNAQ96QF7 691 aa10.71□□□□□ -0.69
CDC42SE1-207ENST00000540998 WRNIP1Q96S55 665 aa10.71□□□□□ -0.69
CDC42SE1-207ENST00000540998 UNKQ9C0B0 810 aaKnown RBP10.71□□□□□ -0.69
CDC42SE1-207ENST00000540998 CLIC5Q9NZA1 410 aa10.71□□□□□ -0.69
CDC42SE1-207ENST00000540998 COX16Q9P0S2 106 aa10.71□□□□□ -0.69
CDC42SE1-207ENST00000540998 FETUBQ9UGM5 382 aa10.71□□□□□ -0.69
CDC42SE1-207ENST00000540998 ANGPTL2Q9UKU9 493 aa10.71□□□□□ -0.69
CDC42SE1-207ENST00000540998 SDR42E2A6NKP2 422 aa10.71□□□□□ -0.69
CDC42SE1-207ENST00000540998 OGTO15294 1046 aa10.71□□□□□ -0.69
CDC42SE1-207ENST00000540998 DCXO43602 365 aa10.71□□□□□ -0.69
CDC42SE1-207ENST00000540998 USP12O75317 370 aa10.71□□□□□ -0.69
CDC42SE1-207ENST00000540998 ALDOAP04075 364 aaKnown RBP10.71□□□□□ -0.69
CDC42SE1-207ENST00000540998 PYGLP06737 847 aa10.71□□□□□ -0.69
CDC42SE1-207ENST00000540998 POLR2BP30876 1174 aaKnown RBP10.71□□□□□ -0.69
CDC42SE1-207ENST00000540998 GPD2P43304 727 aa10.71□□□□□ -0.69
CDC42SE1-207ENST00000540998 AP2B1P63010 937 aa10.71□□□□□ -0.69
CDC42SE1-207ENST00000540998 TRIP10Q15642 601 aa10.71□□□□□ -0.69
CDC42SE1-207ENST00000540998 HSDL1Q3SXM5 330 aa10.71□□□□□ -0.69
CDC42SE1-207ENST00000540998 ZNF667Q5HYK9 610 aa10.71□□□□□ -0.69
CDC42SE1-207ENST00000540998 TEDDM1Q5T9Z0 273 aa10.71□□□□□ -0.69
CDC42SE1-207ENST00000540998 JADE1Q6IE81 842 aa10.71□□□□□ -0.69
CDC42SE1-207ENST00000540998 FRMD7Q6ZUT3 714 aa10.71□□□□□ -0.69
CDC42SE1-207ENST00000540998 DEFB107AQ8IZN7 70 aa10.71□□□□□ -0.69
CDC42SE1-207ENST00000540998 RDM1Q8NG50 284 aa10.71□□□□□ -0.69
CDC42SE1-207ENST00000540998 FAM172AQ8WUF8 416 aa10.71□□□□□ -0.69
CDC42SE1-207ENST00000540998 COPS5Q92905 334 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms