RNA–Protein interactions for RNA: ENST00000540975.5

YBX3-210, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-210ENST00000540975 CERS4Q9HA82 394 aa7.05□□□□□ -1.28
YBX3-210ENST00000540975 KLHL13Q9P2N7 655 aa7.05□□□□□ -1.28
YBX3-210ENST00000540975 SPATA31A1Q5TZJ5 1347 aa7.04□□□□□ -1.28
YBX3-210ENST00000540975 HNRNPDLO14979 420 aaKnown RBP7.04□□□□□ -1.28
YBX3-210ENST00000540975 PLA2G6O60733 806 aa7.04□□□□□ -1.28
YBX3-210ENST00000540975 ARHGAP25P42331 645 aa7.04□□□□□ -1.28
YBX3-210ENST00000540975 SEC23BQ15437 767 aa7.04□□□□□ -1.28
YBX3-210ENST00000540975 FAM90A2PQ658T7 463 aa7.04□□□□□ -1.28
YBX3-210ENST00000540975 SLC2A7Q6PXP3 512 aa7.04□□□□□ -1.28
YBX3-210ENST00000540975 MAP4K1Q92918 833 aa7.04□□□□□ -1.28
YBX3-210ENST00000540975 GRAMD1AQ96CP6 724 aa7.04□□□□□ -1.28
YBX3-210ENST00000540975 ZNF778Q96MU6 729 aa7.04□□□□□ -1.28
YBX3-210ENST00000540975 ADGRE3Q9BY15 652 aa7.04□□□□□ -1.28
YBX3-210ENST00000540975 CHST12Q9NRB3 414 aa7.04□□□□□ -1.28
YBX3-210ENST00000540975 RXFP3Q9NSD7 469 aa7.04□□□□□ -1.28
YBX3-210ENST00000540975 PCDHGB2Q9Y5G2 931 aa7.04□□□□□ -1.28
YBX3-210ENST00000540975 KCNU1A8MYU2 1149 aa7.03□□□□□ -1.28
YBX3-210ENST00000540975 DSCR3O14972 297 aa7.03□□□□□ -1.28
YBX3-210ENST00000540975 TP73O15350 636 aa7.03□□□□□ -1.28
YBX3-210ENST00000540975 BCAR3O75815 825 aa7.03□□□□□ -1.28
YBX3-210ENST00000540975 DRD1P21728 446 aa7.03□□□□□ -1.28
YBX3-210ENST00000540975 ATP5F1P24539 256 aaPredicted RBP7.03□□□□□ -1.28
YBX3-210ENST00000540975 HSPA7P48741 367 aa7.03□□□□□ -1.28
YBX3-210ENST00000540975 ZNF81P51508 661 aa7.03□□□□□ -1.28
YBX3-210ENST00000540975 NSUN2Q08J23 767 aaKnown RBP eCLIP7.03□□□□□ -1.28
YBX3-210ENST00000540975 SEMA3BQ13214 749 aa7.03□□□□□ -1.28
YBX3-210ENST00000540975 ZNF268Q14587 947 aaPredicted RBP7.03□□□□□ -1.28
YBX3-210ENST00000540975 MPEG1Q2M385 716 aa7.03□□□□□ -1.28
YBX3-210ENST00000540975 MORN5Q5VZ52 161 aa7.03□□□□□ -1.28
YBX3-210ENST00000540975 FBXO38Q6PIJ6 1188 aa7.03□□□□□ -1.28
YBX3-210ENST00000540975 CNGA4Q8IV77 575 aa7.03□□□□□ -1.28
YBX3-210ENST00000540975 FAM186BQ8IYM0 893 aa7.03□□□□□ -1.28
YBX3-210ENST00000540975 C16orf71Q8IYS4 520 aaPredicted RBP7.03□□□□□ -1.28
YBX3-210ENST00000540975 SVIPQ8NHG7 77 aa7.03□□□□□ -1.28
YBX3-210ENST00000540975 OSR1Q8TAX0 266 aaPredicted RBP7.03□□□□□ -1.28
YBX3-210ENST00000540975 KIAA1191Q96A73 305 aa7.03□□□□□ -1.28
YBX3-210ENST00000540975 HIC2Q96JB3 615 aa7.03□□□□□ -1.28
YBX3-210ENST00000540975 FAM118BQ9BPY3 351 aa7.03□□□□□ -1.28
YBX3-210ENST00000540975 C1QTNF7Q9BXJ2 289 aa7.03□□□□□ -1.28
YBX3-210ENST00000540975 NECTIN3Q9NQS3 549 aa7.03□□□□□ -1.28
YBX3-210ENST00000540975 TM7SF3Q9NS93 570 aa7.03□□□□□ -1.28
YBX3-210ENST00000540975 ZNF70Q9UC06 446 aaPredicted RBP7.03□□□□□ -1.28
YBX3-210ENST00000540975 MAFFQ9ULX9 164 aa7.03□□□□□ -1.28
YBX3-210ENST00000540975 VPS4AQ9UN37 437 aa7.03□□□□□ -1.28
YBX3-210ENST00000540975 PODXLO00592 558 aa7.02□□□□□ -1.29
YBX3-210ENST00000540975 VIPP01282 170 aa7.02□□□□□ -1.29
YBX3-210ENST00000540975 SRGAP2BP0DMP2 458 aa7.02□□□□□ -1.29
YBX3-210ENST00000540975 JAK3P52333 1124 aa7.02□□□□□ -1.29
YBX3-210ENST00000540975 BFSP2Q13515 415 aa7.02□□□□□ -1.29
YBX3-210ENST00000540975 PFKFB3Q16875 520 aaPredicted RBP7.02□□□□□ -1.29
YBX3-210ENST00000540975 CC2D1BQ5T0F9 858 aaKnown RBP7.02□□□□□ -1.29
YBX3-210ENST00000540975 ZNF425Q6IV72 752 aa7.02□□□□□ -1.29
YBX3-210ENST00000540975 C1QL2Q7Z5L3 287 aa7.02□□□□□ -1.29
YBX3-210ENST00000540975 CLASRPQ8N2M8 674 aaKnown RBP7.02□□□□□ -1.29
YBX3-210ENST00000540975 GADD45GIP1Q8TAE8 222 aaPredicted RBP7.02□□□□□ -1.29
YBX3-210ENST00000540975 DEPTORQ8TB45 409 aa7.02□□□□□ -1.29
YBX3-210ENST00000540975 OVCA2Q8WZ82 227 aa7.02□□□□□ -1.29
YBX3-210ENST00000540975 NUDT22Q9BRQ3 303 aa7.02□□□□□ -1.29
YBX3-210ENST00000540975 ABHD10Q9NUJ1 306 aa7.02□□□□□ -1.29
YBX3-210ENST00000540975 PCDHB2Q9Y5E7 798 aa7.02□□□□□ -1.29
YBX3-210ENST00000540975 RNF8O76064 485 aa7.01□□□□□ -1.29
YBX3-210ENST00000540975 DUSP1P28562 367 aa7.01□□□□□ -1.29
YBX3-210ENST00000540975 WDR5P61964 334 aaKnown RBP7.01□□□□□ -1.29
YBX3-210ENST00000540975 RAE1P78406 368 aaKnown RBP7.01□□□□□ -1.29
YBX3-210ENST00000540975 RAB30Q15771 203 aa7.01□□□□□ -1.29
YBX3-210ENST00000540975 DGKKQ5KSL6 1271 aa7.01□□□□□ -1.29
YBX3-210ENST00000540975 C11orf87Q6NUJ2 197 aa7.01□□□□□ -1.29
YBX3-210ENST00000540975 RPL36ALQ969Q0 106 aaKnown RBP7.01□□□□□ -1.29
YBX3-210ENST00000540975 ELAC2Q9BQ52 826 aaKnown RBP7.01□□□□□ -1.29
YBX3-210ENST00000540975 NLRC4Q9NPP4 1024 aa7.01□□□□□ -1.29
YBX3-210ENST00000540975 RNF7Q9UBF6 113 aa7.01□□□□□ -1.29
YBX3-210ENST00000540975 DTNAQ9Y4J8 743 aa7.01□□□□□ -1.29
YBX3-210ENST00000540975 DHHO43323 396 aa7□□□□□ -1.29
YBX3-210ENST00000540975 ABCB4P21439 1286 aa7□□□□□ -1.29
YBX3-210ENST00000540975 MMP8P22894 467 aa7□□□□□ -1.29
YBX3-210ENST00000540975 LMO1P25800 156 aa7□□□□□ -1.29
YBX3-210ENST00000540975 GSTM5P46439 218 aa7□□□□□ -1.29
YBX3-210ENST00000540975 GHRHRQ02643 423 aa7□□□□□ -1.29
YBX3-210ENST00000540975 KLF9Q13886 244 aaPredicted RBP7□□□□□ -1.29
YBX3-210ENST00000540975 TRIP6Q15654 476 aaKnown RBP7□□□□□ -1.29
YBX3-210ENST00000540975 CCDC144NLQ6NUI1 221 aa7□□□□□ -1.29
YBX3-210ENST00000540975 PIK3AP1Q6ZUJ8 805 aa7□□□□□ -1.29
YBX3-210ENST00000540975 RASGRP3Q8IV61 690 aa7□□□□□ -1.29
YBX3-210ENST00000540975 SMG7Q92540 1137 aaKnown RBP7□□□□□ -1.29
YBX3-210ENST00000540975 GJA10Q969M2 543 aa7□□□□□ -1.29
YBX3-210ENST00000540975 NUAK2Q9H093 628 aa7□□□□□ -1.29
YBX3-210ENST00000540975 CA14Q9ULX7 337 aa7□□□□□ -1.29
YBX3-210ENST00000540975 HEMK1Q9Y5R4 338 aaPredicted RBP7□□□□□ -1.29
YBX3-210ENST00000540975 C16orf96A6NNT2 1141 aa6.99□□□□□ -1.29
YBX3-210ENST00000540975 IGHMBP2P38935 993 aaKnown RBP6.99□□□□□ -1.29
YBX3-210ENST00000540975 BTKQ06187 659 aa6.99□□□□□ -1.29
YBX3-210ENST00000540975 KPNB1Q14974 876 aaKnown RBP6.99□□□□□ -1.29
YBX3-210ENST00000540975 FAM110CQ1W6H9 321 aa6.99□□□□□ -1.29
YBX3-210ENST00000540975 ACSM6Q6P461 480 aa6.99□□□□□ -1.29
YBX3-210ENST00000540975 ACRBPQ8NEB7 543 aa6.99□□□□□ -1.29
YBX3-210ENST00000540975 STK33Q9BYT3 514 aa6.99□□□□□ -1.29
YBX3-210ENST00000540975 SLC39A10Q9ULF5 831 aa6.99□□□□□ -1.29
YBX3-210ENST00000540975 CCDC187A0A096LP49 1063 aa6.98□□□□□ -1.29
YBX3-210ENST00000540975 E5RJQ4 531 aa6.98□□□□□ -1.29
YBX3-210ENST00000540975 CTIFO43310 598 aaKnown RBP6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms