RNA–Protein interactions for RNA: ENST00000540963.1

CHFR-218, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 875 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-218ENST00000540963 PCOLCE2Q9UKZ9 415 aa28.23■■■□□ 2.11
CHFR-218ENST00000540963 ACACAQ13085 2346 aa28.23■■■□□ 2.11
CHFR-218ENST00000540963 MEI4A8MW99 385 aa28.22■■■□□ 2.11
CHFR-218ENST00000540963 WASH3PC4AMC7 463 aa28.22■■■□□ 2.11
CHFR-218ENST00000540963 CUTAO60888 179 aa28.22■■■□□ 2.11
CHFR-218ENST00000540963 ACO1P21399 889 aaKnown RBP28.22■■■□□ 2.11
CHFR-218ENST00000540963 MAOBP27338 520 aa28.22■■■□□ 2.11
CHFR-218ENST00000540963 ZACNQ401N2 412 aa28.22■■■□□ 2.11
CHFR-218ENST00000540963 IL27RAQ6UWB1 636 aa28.22■■■□□ 2.11
CHFR-218ENST00000540963 SLC9A9Q8IVB4 645 aa28.22■■■□□ 2.11
CHFR-218ENST00000540963 THAP10Q9P2Z0 257 aaPredicted RBP28.22■■■□□ 2.11
CHFR-218ENST00000540963 CKAP5Q14008 2032 aa28.21■■■□□ 2.11
CHFR-218ENST00000540963 HHLA1C9JL84 531 aa28.21■■■□□ 2.11
CHFR-218ENST00000540963 CYP26A1O43174 497 aa28.21■■■□□ 2.11
CHFR-218ENST00000540963 STX6O43752 255 aa28.21■■■□□ 2.11
CHFR-218ENST00000540963 CER1O95813 267 aa28.21■■■□□ 2.11
CHFR-218ENST00000540963 PENKP01210 267 aaPredicted RBP28.21■■■□□ 2.11
CHFR-218ENST00000540963 IGLV3-19P01714 112 aa28.21■■■□□ 2.11
CHFR-218ENST00000540963 NCAM1P13591 858 aa28.21■■■□□ 2.11
CHFR-218ENST00000540963 RARGP13631 454 aa28.21■■■□□ 2.11
CHFR-218ENST00000540963 CHKAP35790 457 aa28.21■■■□□ 2.11
CHFR-218ENST00000540963 CLEC20AQ6ZU45 233 aa28.21■■■□□ 2.11
CHFR-218ENST00000540963 UCMAQ8WVF2 138 aa28.21■■■□□ 2.11
CHFR-218ENST00000540963 CDK5RAP1Q96SZ6 601 aaKnown RBP28.21■■■□□ 2.11
CHFR-218ENST00000540963 MKRN2Q9H000 416 aaKnown RBP28.21■■■□□ 2.11
CHFR-218ENST00000540963 SLC39A2Q9NP94 309 aa28.21■■■□□ 2.11
CHFR-218ENST00000540963 DMAC2Q9NW81 257 aa28.21■■■□□ 2.11
CHFR-218ENST00000540963 STC2O76061 302 aa28.2■■■□□ 2.1
CHFR-218ENST00000540963 YEATS4O95619 227 aa28.2■■■□□ 2.1
CHFR-218ENST00000540963 SHC4Q6S5L8 630 aa28.2■■■□□ 2.1
CHFR-218ENST00000540963 GPRIN1Q7Z2K8 1008 aa28.2■■■□□ 2.1
CHFR-218ENST00000540963 PNPLA1Q8N8W4 532 aa28.2■■■□□ 2.1
CHFR-218ENST00000540963 C12orf29Q8N999 325 aa28.2■■■□□ 2.1
CHFR-218ENST00000540963 GPR174Q9BXC1 333 aa28.2■■■□□ 2.1
CHFR-218ENST00000540963 PCED1AQ9H1Q7 454 aa28.2■■■□□ 2.1
CHFR-218ENST00000540963 NMUR1Q9HB89 426 aa28.2■■■□□ 2.1
CHFR-218ENST00000540963 FOXD4L1Q9NU39 408 aa28.2■■■□□ 2.1
CHFR-218ENST00000540963 FAM49BQ9NUQ9 324 aa28.2■■■□□ 2.1
CHFR-218ENST00000540963 CLIC5Q9NZA1 410 aa28.2■■■□□ 2.1
CHFR-218ENST00000540963 DKK4Q9UBT3 224 aa28.2■■■□□ 2.1
CHFR-218ENST00000540963 HMGXB4Q9UGU5 601 aa28.2■■■□□ 2.1
CHFR-218ENST00000540963 PCDHGB2Q9Y5G2 931 aa28.2■■■□□ 2.1
CHFR-218ENST00000540963 METTL12A8MUP2 240 aa28.19■■■□□ 2.1
CHFR-218ENST00000540963 IKBKBO14920 756 aa28.19■■■□□ 2.1
CHFR-218ENST00000540963 ASS1P00966 412 aaKnown RBP28.19■■■□□ 2.1
CHFR-218ENST00000540963 MFAP3P55082 362 aa28.19■■■□□ 2.1
CHFR-218ENST00000540963 INCA1Q0VD86 236 aa28.19■■■□□ 2.1
CHFR-218ENST00000540963 C10orf120Q5SQS8 335 aa28.19■■■□□ 2.1
CHFR-218ENST00000540963 DBX2Q6ZNG2 339 aa28.19■■■□□ 2.1
CHFR-218ENST00000540963 TMC2Q8TDI7 906 aa28.19■■■□□ 2.1
CHFR-218ENST00000540963 ERLEC1Q96DZ1 483 aa28.19■■■□□ 2.1
CHFR-218ENST00000540963 ZNF396Q96N95 335 aaPredicted RBP28.19■■■□□ 2.1
CHFR-218ENST00000540963 DCLK3Q9C098 648 aa28.19■■■□□ 2.1
CHFR-218ENST00000540963 A0A1W2PQH9 124 aa28.18■■■□□ 2.1
CHFR-218ENST00000540963 BCAT2O15382 392 aaPredicted RBP28.18■■■□□ 2.1
CHFR-218ENST00000540963 MATKP42679 507 aa28.18■■■□□ 2.1
CHFR-218ENST00000540963 ASPAP45381 313 aa28.18■■■□□ 2.1
CHFR-218ENST00000540963 TPMTP51580 245 aa28.18■■■□□ 2.1
CHFR-218ENST00000540963 KIF11P52732 1056 aa28.18■■■□□ 2.1
CHFR-218ENST00000540963 COG7P83436 770 aa28.18■■■□□ 2.1
CHFR-218ENST00000540963 EIF4HQ15056 248 aaKnown RBP28.18■■■□□ 2.1
CHFR-218ENST00000540963 FYB2Q5VWT5 728 aa28.18■■■□□ 2.1
CHFR-218ENST00000540963 CCDC186Q7Z3E2 898 aa28.18■■■□□ 2.1
CHFR-218ENST00000540963 SLCO6A1Q86UG4 719 aa28.18■■■□□ 2.1
CHFR-218ENST00000540963 PDZD3Q86UT5 571 aa28.18■■■□□ 2.1
CHFR-218ENST00000540963 TMPRSS6Q8IU80 811 aa28.18■■■□□ 2.1
CHFR-218ENST00000540963 ZCCHC9Q8N567 271 aaKnown RBP28.18■■■□□ 2.1
CHFR-218ENST00000540963 SIPA1Q96FS4 1042 aa28.18■■■□□ 2.1
CHFR-218ENST00000540963 CDC6Q99741 560 aa28.18■■■□□ 2.1
CHFR-218ENST00000540963 NUP58Q9BVL2 599 aa28.18■■■□□ 2.1
CHFR-218ENST00000540963 TM7SF3Q9NS93 570 aa28.18■■■□□ 2.1
CHFR-218ENST00000540963 PLK2Q9NYY3 685 aa28.18■■■□□ 2.1
CHFR-218ENST00000540963 SYNCRIPO60506 623 aaKnown RBP28.17■■■□□ 2.1
CHFR-218ENST00000540963 RALAP11233 206 aa28.17■■■□□ 2.1
CHFR-218ENST00000540963 ADORA2BP29275 332 aa28.17■■■□□ 2.1
CHFR-218ENST00000540963 IL12RB1P42701 662 aa28.17■■■□□ 2.1
CHFR-218ENST00000540963 ORC1Q13415 861 aa28.17■■■□□ 2.1
CHFR-218ENST00000540963 DCAF12L1Q5VU92 463 aa28.17■■■□□ 2.1
CHFR-218ENST00000540963 TMPRSS7Q7RTY8 843 aa28.17■■■□□ 2.1
CHFR-218ENST00000540963 BAHD1Q8TBE0 780 aaPredicted RBP28.17■■■□□ 2.1
CHFR-218ENST00000540963 PRCCQ92733 491 aaPredicted RBP28.17■■■□□ 2.1
CHFR-218ENST00000540963 BHMTQ93088 406 aa28.17■■■□□ 2.1
CHFR-218ENST00000540963 CYFIP2Q96F07 1278 aa28.17■■■□□ 2.1
CHFR-218ENST00000540963 DNAI2Q9GZS0 605 aa28.17■■■□□ 2.1
CHFR-218ENST00000540963 BLZF1Q9H2G9 400 aa28.17■■■□□ 2.1
CHFR-218ENST00000540963 GAREM1Q9H706 876 aa28.17■■■□□ 2.1
CHFR-218ENST00000540963 LOC400499M0QZD8 3231 aa28.16■■■□□ 2.1
CHFR-218ENST00000540963 KCNJ18B7U540 433 aa28.16■■■□□ 2.1
CHFR-218ENST00000540963 POLR2DO15514 142 aaKnown RBP28.16■■■□□ 2.1
CHFR-218ENST00000540963 FLRT2O43155 660 aa28.16■■■□□ 2.1
CHFR-218ENST00000540963 DKK1O94907 266 aa28.16■■■□□ 2.1
CHFR-218ENST00000540963 GEN1Q17RS7 908 aa28.16■■■□□ 2.1
CHFR-218ENST00000540963 SV2AQ7L0J3 742 aa28.16■■■□□ 2.1
CHFR-218ENST00000540963 SETD7Q8WTS6 366 aaKnown RBP28.16■■■□□ 2.1
CHFR-218ENST00000540963 ELMO3Q96BJ8 720 aa28.16■■■□□ 2.1
CHFR-218ENST00000540963 NT5C1AQ9BXI3 368 aa28.16■■■□□ 2.1
CHFR-218ENST00000540963 MIR1-1HGQ9H1L0 117 aa28.16■■■□□ 2.1
CHFR-218ENST00000540963 CYP3A43Q9HB55 503 aa28.16■■■□□ 2.1
CHFR-218ENST00000540963 SCUBE2Q9NQ36 999 aa28.16■■■□□ 2.1
CHFR-218ENST00000540963 NAGPAQ9UK23 515 aa28.16■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms