RNA–Protein interactions for RNA: ENST00000540768.5

NUP85-203, Transcript of nucleoporin 85, humanhuman

TSL 2 BASIC

Gene NUP85, Length 1,926 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-203ENST00000540768 CD99L2Q8TCZ2 262 aa10.28□□□□□ -0.76
NUP85-203ENST00000540768 PPP1R13LQ8WUF5 828 aa10.28□□□□□ -0.76
NUP85-203ENST00000540768 LRRN4Q8WUT4 740 aa10.28□□□□□ -0.76
NUP85-203ENST00000540768 MAGEB5Q9BZ81 275 aa10.28□□□□□ -0.76
NUP85-203ENST00000540768 KLC2Q9H0B6 622 aa10.28□□□□□ -0.76
NUP85-203ENST00000540768 VPS11Q9H270 941 aa10.28□□□□□ -0.76
NUP85-203ENST00000540768 TRIM33Q9UPN9 1127 aa10.28□□□□□ -0.76
NUP85-203ENST00000540768 GNEQ9Y223 722 aaKnown RBP10.28□□□□□ -0.76
NUP85-203ENST00000540768 KPNA7A9QM74 516 aa10.27□□□□□ -0.76
NUP85-203ENST00000540768 TRDMT1O14717 391 aaKnown RBP10.27□□□□□ -0.76
NUP85-203ENST00000540768 GCATO75600 419 aa10.27□□□□□ -0.76
NUP85-203ENST00000540768 METTL18O95568 372 aa10.27□□□□□ -0.76
NUP85-203ENST00000540768 CD4P01730 458 aa10.27□□□□□ -0.76
NUP85-203ENST00000540768 KRT16P08779 473 aa10.27□□□□□ -0.76
NUP85-203ENST00000540768 PDGFRBP09619 1106 aa10.27□□□□□ -0.76
NUP85-203ENST00000540768 CYP2C9P11712 490 aa10.27□□□□□ -0.76
NUP85-203ENST00000540768 KCNE1P15382 129 aa10.27□□□□□ -0.76
NUP85-203ENST00000540768 DESP17661 470 aa10.27□□□□□ -0.76
NUP85-203ENST00000540768 PRKCHP24723 683 aa10.27□□□□□ -0.76
NUP85-203ENST00000540768 ADORA2BP29275 332 aa10.27□□□□□ -0.76
NUP85-203ENST00000540768 AXLP30530 894 aa10.27□□□□□ -0.76
NUP85-203ENST00000540768 GNL1P36915 607 aaPredicted RBP10.27□□□□□ -0.76
NUP85-203ENST00000540768 GBE1Q04446 702 aa10.27□□□□□ -0.76
NUP85-203ENST00000540768 SLC45A4Q5BKX6 768 aa10.27□□□□□ -0.76
NUP85-203ENST00000540768 PPP6R3Q5H9R7 873 aaPredicted RBP10.27□□□□□ -0.76
NUP85-203ENST00000540768 FBXO47Q5MNV8 452 aa10.27□□□□□ -0.76
NUP85-203ENST00000540768 UBXN11Q5T124 520 aa10.27□□□□□ -0.76
NUP85-203ENST00000540768 ZNF618Q5T7W0 954 aa10.27□□□□□ -0.76
NUP85-203ENST00000540768 WLSQ5T9L3 541 aa10.27□□□□□ -0.76
NUP85-203ENST00000540768 PRPF38BQ5VTL8 546 aaKnown RBP10.27□□□□□ -0.76
NUP85-203ENST00000540768 C4orf22Q6V702 233 aa10.27□□□□□ -0.76
NUP85-203ENST00000540768 ZNF534Q76KX8 674 aa10.27□□□□□ -0.76
NUP85-203ENST00000540768 SLC26A11Q86WA9 606 aa10.27□□□□□ -0.76
NUP85-203ENST00000540768 CDKL3Q8IVW4 592 aaPredicted RBP10.27□□□□□ -0.76
NUP85-203ENST00000540768 TMEM40Q8WWA1 233 aa10.27□□□□□ -0.76
NUP85-203ENST00000540768 APOPT1Q96IL0 206 aa10.27□□□□□ -0.76
NUP85-203ENST00000540768 KCTD15Q96SI1 283 aaPredicted RBP10.27□□□□□ -0.76
NUP85-203ENST00000540768 ZNF180Q9UJW8 692 aa10.27□□□□□ -0.76
NUP85-203ENST00000540768 USP3Q9Y6I4 520 aa10.27□□□□□ -0.76
NUP85-203ENST00000540768 WDR91A4D1P6 747 aa10.27□□□□□ -0.77
NUP85-203ENST00000540768 SLC15A5A6NIM6 579 aa10.27□□□□□ -0.77
NUP85-203ENST00000540768 CXorf49A8MYA2 514 aaPredicted RBP10.27□□□□□ -0.77
NUP85-203ENST00000540768 HGSO14964 777 aaPredicted RBP10.27□□□□□ -0.77
NUP85-203ENST00000540768 DYNC1LI2O43237 492 aaPredicted RBP10.27□□□□□ -0.77
NUP85-203ENST00000540768 INHBAP08476 426 aa10.27□□□□□ -0.77
NUP85-203ENST00000540768 GSTA2P09210 222 aa10.27□□□□□ -0.77
NUP85-203ENST00000540768 LCP1P13796 627 aa10.27□□□□□ -0.77
NUP85-203ENST00000540768 ZFXP17010 805 aaPredicted RBP10.27□□□□□ -0.77
NUP85-203ENST00000540768 ACADSBP45954 432 aa10.27□□□□□ -0.77
NUP85-203ENST00000540768 NR2C2P49116 596 aa10.27□□□□□ -0.77
NUP85-203ENST00000540768 SOX4Q06945 474 aaPredicted RBP10.27□□□□□ -0.77
NUP85-203ENST00000540768 SETDB1Q15047 1291 aa10.27□□□□□ -0.77
NUP85-203ENST00000540768 FAM110CQ1W6H9 321 aa10.27□□□□□ -0.77
NUP85-203ENST00000540768 PREPLQ4J6C6 727 aaPredicted RBP10.27□□□□□ -0.77
NUP85-203ENST00000540768 PLEKHG4Q58EX7 1191 aa10.27□□□□□ -0.77
NUP85-203ENST00000540768 CHSY1Q86X52 802 aa10.27□□□□□ -0.77
NUP85-203ENST00000540768 CCDC185Q8N715 623 aa10.27□□□□□ -0.77
NUP85-203ENST00000540768 ZNF398Q8TD17 642 aa10.27□□□□□ -0.77
NUP85-203ENST00000540768 PTPRN2Q92932 1015 aa10.27□□□□□ -0.77
NUP85-203ENST00000540768 LRRC39Q96DD0 335 aa10.27□□□□□ -0.77
NUP85-203ENST00000540768 ERP27Q96DN0 273 aa10.27□□□□□ -0.77
NUP85-203ENST00000540768 CFAP36Q96G28 342 aa10.27□□□□□ -0.77
NUP85-203ENST00000540768 HSFY1Q96LI6 401 aa10.27□□□□□ -0.77
NUP85-203ENST00000540768 QKIQ96PU8 341 aaKnown RBP eCLIP10.27□□□□□ -0.77
NUP85-203ENST00000540768 CSPG4P5Q96PW8 444 aa10.27□□□□□ -0.77
NUP85-203ENST00000540768 LRRC37BQ96QE4 947 aa10.27□□□□□ -0.77
NUP85-203ENST00000540768 TSPAN18Q96SJ8 248 aa10.27□□□□□ -0.77
NUP85-203ENST00000540768 APOL6Q9BWW8 343 aa10.27□□□□□ -0.77
NUP85-203ENST00000540768 RNF39Q9H2S5 420 aa10.27□□□□□ -0.77
NUP85-203ENST00000540768 DHX35Q9H5Z1 703 aaKnown RBP10.27□□□□□ -0.77
NUP85-203ENST00000540768 MANSC1Q9H8J5 431 aa10.27□□□□□ -0.77
NUP85-203ENST00000540768 SMYD2Q9NRG4 433 aa10.27□□□□□ -0.77
NUP85-203ENST00000540768 SLC5A4Q9NY91 659 aa10.27□□□□□ -0.77
NUP85-203ENST00000540768 KLK14Q9P0G3 267 aa10.27□□□□□ -0.77
NUP85-203ENST00000540768 KANSL3Q9P2N6 904 aa10.27□□□□□ -0.77
NUP85-203ENST00000540768 ZC3H7BQ9UGR2 993 aaKnown RBP10.27□□□□□ -0.77
NUP85-203ENST00000540768 BAIAP2L1Q9UHR4 511 aa10.27□□□□□ -0.77
NUP85-203ENST00000540768 AP4E1Q9UPM8 1137 aa10.27□□□□□ -0.77
NUP85-203ENST00000540768 HAS3O00219 553 aa10.26□□□□□ -0.77
NUP85-203ENST00000540768 C2CD2LO14523 706 aa10.26□□□□□ -0.77
NUP85-203ENST00000540768 LPXNO60711 386 aa10.26□□□□□ -0.77
NUP85-203ENST00000540768 DCTN3O75935 186 aa10.26□□□□□ -0.77
NUP85-203ENST00000540768 ATP5HO75947 161 aa10.26□□□□□ -0.77
NUP85-203ENST00000540768 APRTP07741 180 aa10.26□□□□□ -0.77
NUP85-203ENST00000540768 T-ENOLP0DO92 83 aa10.26□□□□□ -0.77
NUP85-203ENST00000540768 PYGBP11216 843 aa10.26□□□□□ -0.77
NUP85-203ENST00000540768 TPSB2P20231 275 aa10.26□□□□□ -0.77
NUP85-203ENST00000540768 TKTP29401 623 aaKnown RBP10.26□□□□□ -0.77
NUP85-203ENST00000540768 ALDH3A1P30838 453 aa10.26□□□□□ -0.77
NUP85-203ENST00000540768 PNPLA4P41247 253 aa10.26□□□□□ -0.77
NUP85-203ENST00000540768 MFSD10Q14728 455 aa10.26□□□□□ -0.77
NUP85-203ENST00000540768 SNX17Q15036 470 aa10.26□□□□□ -0.77
NUP85-203ENST00000540768 TAF1CQ15572 869 aaPredicted RBP10.26□□□□□ -0.77
NUP85-203ENST00000540768 TPSAB1Q15661 275 aa10.26□□□□□ -0.77
NUP85-203ENST00000540768 SEPT7Q16181 437 aaKnown RBP10.26□□□□□ -0.77
NUP85-203ENST00000540768 SPDYAQ5MJ70 313 aa10.26□□□□□ -0.77
NUP85-203ENST00000540768 PRAMEF19Q5SWL8 479 aa10.26□□□□□ -0.77
NUP85-203ENST00000540768 TTC39BQ5VTQ0 682 aaPredicted RBP10.26□□□□□ -0.77
NUP85-203ENST00000540768 NCBP2-AS2Q69YL0 99 aa10.26□□□□□ -0.77
NUP85-203ENST00000540768 STRADAQ7RTN6 431 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms