RNA–Protein interactions for RNA: ENST00000540683.1

CDCA3-208, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 985 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-208ENST00000540683 HOXD12P35452 270 aa10.88□□□□□ -0.67
CDCA3-208ENST00000540683 TIE1P35590 1138 aa10.88□□□□□ -0.67
CDCA3-208ENST00000540683 ARID5AQ03989 594 aa10.88□□□□□ -0.67
CDCA3-208ENST00000540683 KDSRQ06136 332 aa10.88□□□□□ -0.67
CDCA3-208ENST00000540683 PDE4CQ08493 712 aa10.88□□□□□ -0.67
CDCA3-208ENST00000540683 EFEMP1Q12805 493 aa10.88□□□□□ -0.67
CDCA3-208ENST00000540683 KCNH2Q12809 1159 aa10.88□□□□□ -0.67
CDCA3-208ENST00000540683 LPAL2Q16609 132 aa10.88□□□□□ -0.67
CDCA3-208ENST00000540683 NUGGCQ68CJ6 796 aa10.88□□□□□ -0.67
CDCA3-208ENST00000540683 ANO7Q6IWH7 933 aa10.88□□□□□ -0.67
CDCA3-208ENST00000540683 PGBD3Q8N328 593 aa10.88□□□□□ -0.67
CDCA3-208ENST00000540683 CPXM2Q8N436 756 aa10.88□□□□□ -0.67
CDCA3-208ENST00000540683 ALLCQ8N6M5 410 aa10.88□□□□□ -0.67
CDCA3-208ENST00000540683 TXNDC5Q8NBS9 432 aaKnown RBP10.88□□□□□ -0.67
CDCA3-208ENST00000540683 EHBP1Q8NDI1 1231 aa10.88□□□□□ -0.67
CDCA3-208ENST00000540683 RMDN1Q96DB5 314 aa10.88□□□□□ -0.67
CDCA3-208ENST00000540683 NOX5Q96PH1 765 aa10.88□□□□□ -0.67
CDCA3-208ENST00000540683 SRRTQ9BXP5 876 aaKnown RBP10.88□□□□□ -0.67
CDCA3-208ENST00000540683 SLC27A6Q9Y2P4 619 aa10.88□□□□□ -0.67
CDCA3-208ENST00000540683 KIAA1549LQ6ZVL6 1849 aa10.87□□□□□ -0.67
CDCA3-208ENST00000540683 DMXL1Q9Y485 3027 aa10.87□□□□□ -0.67
CDCA3-208ENST00000540683 GOLGA6L22H0YM25 854 aa10.87□□□□□ -0.67
CDCA3-208ENST00000540683 SLC30A4O14863 429 aa10.87□□□□□ -0.67
CDCA3-208ENST00000540683 IRAK2O43187 625 aa10.87□□□□□ -0.67
CDCA3-208ENST00000540683 AP5Z1O43299 807 aa10.87□□□□□ -0.67
CDCA3-208ENST00000540683 TPM2P07951 284 aa10.87□□□□□ -0.67
CDCA3-208ENST00000540683 CORO1AP31146 461 aaKnown RBP10.87□□□□□ -0.67
CDCA3-208ENST00000540683 MPLP40238 635 aa10.87□□□□□ -0.67
CDCA3-208ENST00000540683 KIR2DL1P43626 348 aaPredicted RBP10.87□□□□□ -0.67
CDCA3-208ENST00000540683 SLC11A2P49281 568 aa10.87□□□□□ -0.67
CDCA3-208ENST00000540683 PMS1P54277 932 aaKnown RBP10.87□□□□□ -0.67
CDCA3-208ENST00000540683 DMWDQ09019 674 aa10.87□□□□□ -0.67
CDCA3-208ENST00000540683 PLK5Q496M5 336 aa10.87□□□□□ -0.67
CDCA3-208ENST00000540683 MPPE1Q53F39 396 aa10.87□□□□□ -0.67
CDCA3-208ENST00000540683 Q6ZNB5 142 aa10.87□□□□□ -0.67
CDCA3-208ENST00000540683 TPGS1Q6ZTW0 290 aa10.87□□□□□ -0.67
CDCA3-208ENST00000540683 GPRIN1Q7Z2K8 1008 aa10.87□□□□□ -0.67
CDCA3-208ENST00000540683 TTC30AQ86WT1 665 aa10.87□□□□□ -0.67
CDCA3-208ENST00000540683 TMEM25Q86YD3 366 aa10.87□□□□□ -0.67
CDCA3-208ENST00000540683 TRIM59Q8IWR1 403 aa10.87□□□□□ -0.67
CDCA3-208ENST00000540683 CHPFQ8IZ52 775 aa10.87□□□□□ -0.67
CDCA3-208ENST00000540683 CCDC33Q8N5R6 958 aa10.87□□□□□ -0.67
CDCA3-208ENST00000540683 IL17RCQ8NAC3 791 aa10.87□□□□□ -0.67
CDCA3-208ENST00000540683 CEP76Q8TAP6 659 aa10.87□□□□□ -0.67
CDCA3-208ENST00000540683 STK32AQ8WU08 396 aa10.87□□□□□ -0.67
CDCA3-208ENST00000540683 ELMO3Q96BJ8 720 aa10.87□□□□□ -0.67
CDCA3-208ENST00000540683 MED15Q96RN5 788 aa10.87□□□□□ -0.67
CDCA3-208ENST00000540683 ARID3AQ99856 593 aa10.87□□□□□ -0.67
CDCA3-208ENST00000540683 CEP83Q9Y592 693 aa10.87□□□□□ -0.67
CDCA3-208ENST00000540683 GPR179Q6PRD1 2367 aa10.86□□□□□ -0.67
CDCA3-208ENST00000540683 SLC12A8A0AV02 714 aa10.86□□□□□ -0.67
CDCA3-208ENST00000540683 M0QYV0 167 aa10.86□□□□□ -0.67
CDCA3-208ENST00000540683 O00370 1275 aa10.86□□□□□ -0.67
CDCA3-208ENST00000540683 BIN1O00499 593 aa10.86□□□□□ -0.67
CDCA3-208ENST00000540683 KHNYNO15037 678 aaKnown RBP10.86□□□□□ -0.67
CDCA3-208ENST00000540683 SYNCRIPO60506 623 aaKnown RBP10.86□□□□□ -0.67
CDCA3-208ENST00000540683 CAVIN2O95810 425 aa10.86□□□□□ -0.67
CDCA3-208ENST00000540683 TBX18O95935 607 aa10.86□□□□□ -0.67
CDCA3-208ENST00000540683 HOXB2P14652 356 aa10.86□□□□□ -0.67
CDCA3-208ENST00000540683 HNRNPLP14866 589 aaKnown RBP eCLIP10.86□□□□□ -0.67
CDCA3-208ENST00000540683 RING1Q06587 406 aa10.86□□□□□ -0.67
CDCA3-208ENST00000540683 ADIGQ0VDE8 80 aa10.86□□□□□ -0.67
CDCA3-208ENST00000540683 SFSWAPQ12872 951 aaKnown RBP10.86□□□□□ -0.67
CDCA3-208ENST00000540683 LMAN2Q12907 356 aa10.86□□□□□ -0.67
CDCA3-208ENST00000540683 LRMPQ12912 555 aa10.86□□□□□ -0.67
CDCA3-208ENST00000540683 NNTQ13423 1086 aa10.86□□□□□ -0.67
CDCA3-208ENST00000540683 GAB4Q2WGN9 574 aa10.86□□□□□ -0.67
CDCA3-208ENST00000540683 MPP7Q5T2T1 576 aa10.86□□□□□ -0.67
CDCA3-208ENST00000540683 DAB2IPQ5VWQ8 1189 aa10.86□□□□□ -0.67
CDCA3-208ENST00000540683 BSPRYQ5W0U4 402 aa10.86□□□□□ -0.67
CDCA3-208ENST00000540683 PMS2CLQ68D20 193 aa10.86□□□□□ -0.67
CDCA3-208ENST00000540683 ISM2Q6H9L7 571 aa10.86□□□□□ -0.67
CDCA3-208ENST00000540683 PKN3Q6P5Z2 889 aa10.86□□□□□ -0.67
CDCA3-208ENST00000540683 GBP6Q6ZN66 633 aa10.86□□□□□ -0.67
CDCA3-208ENST00000540683 BEND5Q7L4P6 421 aa10.86□□□□□ -0.67
CDCA3-208ENST00000540683 CYP2U1Q7Z449 544 aa10.86□□□□□ -0.67
CDCA3-208ENST00000540683 ANKS1BQ7Z6G8 1248 aa10.86□□□□□ -0.67
CDCA3-208ENST00000540683 SCD5Q86SK9 330 aa10.86□□□□□ -0.67
CDCA3-208ENST00000540683 KBTBD6Q86V97 674 aa10.86□□□□□ -0.67
CDCA3-208ENST00000540683 NAT16Q8N8M0 369 aa10.86□□□□□ -0.67
CDCA3-208ENST00000540683 RBBP8NLQ8NC74 664 aaPredicted RBP10.86□□□□□ -0.67
CDCA3-208ENST00000540683 WFIKKN2Q8TEU8 576 aa10.86□□□□□ -0.67
CDCA3-208ENST00000540683 DDI1Q8WTU0 396 aa10.86□□□□□ -0.67
CDCA3-208ENST00000540683 AZIN2Q96A70 460 aa10.86□□□□□ -0.67
CDCA3-208ENST00000540683 SERPINB11Q96P15 392 aa10.86□□□□□ -0.67
CDCA3-208ENST00000540683 PPP1R9BQ96SB3 815 aa10.86□□□□□ -0.67
CDCA3-208ENST00000540683 ULBP1Q9BZM6 244 aa10.86□□□□□ -0.67
CDCA3-208ENST00000540683 MIS12Q9H081 205 aa10.86□□□□□ -0.67
CDCA3-208ENST00000540683 ARRDC1-AS1Q9H2J1 176 aa10.86□□□□□ -0.67
CDCA3-208ENST00000540683 FBRSQ9HAH7 460 aa10.86□□□□□ -0.67
CDCA3-208ENST00000540683 NMUR1Q9HB89 426 aa10.86□□□□□ -0.67
CDCA3-208ENST00000540683 SLC12A6Q9UHW9 1150 aa10.86□□□□□ -0.67
CDCA3-208ENST00000540683 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.86□□□□□ -0.67
CDCA3-208ENST00000540683 ATG2BQ96BY7 2078 aa10.86□□□□□ -0.67
CDCA3-208ENST00000540683 CEP250Q9BV73 2442 aa10.86□□□□□ -0.67
CDCA3-208ENST00000540683 CACNA1AO00555 2505 aa10.86□□□□□ -0.67
CDCA3-208ENST00000540683 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.85□□□□□ -0.67
CDCA3-208ENST00000540683 TCRBV21S2A2A0A5A6 115 aa10.85□□□□□ -0.67
CDCA3-208ENST00000540683 PENKP01210 267 aaPredicted RBP10.85□□□□□ -0.67
CDCA3-208ENST00000540683 SLC2A3P11169 496 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms