RNA–Protein interactions for RNA: ENST00000540428.1

CBX3P4-202, Transcript of chromobox 3 pseudogene 4, humanhuman

TSL 2 BASIC

Gene CBX3P4, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-202ENST00000540428 MINDY1Q8N5J2 469 aa12.63□□□□□ -0.39
CBX3P4-202ENST00000540428 TRIML1Q8N9V2 468 aa12.63□□□□□ -0.39
CBX3P4-202ENST00000540428 CCDC150Q8NCX0 1101 aa12.63□□□□□ -0.39
CBX3P4-202ENST00000540428 TAS1R2Q8TE23 839 aa12.63□□□□□ -0.39
CBX3P4-202ENST00000540428 MRGPRX1Q96LB2 322 aa12.63□□□□□ -0.39
CBX3P4-202ENST00000540428 GTPBP2Q9BX10 602 aaKnown RBP12.63□□□□□ -0.39
CBX3P4-202ENST00000540428 DUSP16Q9BY84 665 aa12.63□□□□□ -0.39
CBX3P4-202ENST00000540428 DCLK3Q9C098 648 aa12.63□□□□□ -0.39
CBX3P4-202ENST00000540428 APOBEC3GQ9HC16 384 aaKnown RBP12.63□□□□□ -0.39
CBX3P4-202ENST00000540428 CACNA2D2Q9NY47 1150 aa12.63□□□□□ -0.39
CBX3P4-202ENST00000540428 NAGPAQ9UK23 515 aa12.63□□□□□ -0.39
CBX3P4-202ENST00000540428 HPSEQ9Y251 543 aa12.63□□□□□ -0.39
CBX3P4-202ENST00000540428 MSRB2Q9Y3D2 182 aa12.63□□□□□ -0.39
CBX3P4-202ENST00000540428 NFE2L3Q9Y4A8 694 aa12.63□□□□□ -0.39
CBX3P4-202ENST00000540428 CFAP47Q6ZTR5 3102 aa12.63□□□□□ -0.39
CBX3P4-202ENST00000540428 MYO18AQ92614 2054 aaKnown RBP12.62□□□□□ -0.39
CBX3P4-202ENST00000540428 FAM221BA6H8Z2 402 aa12.62□□□□□ -0.39
CBX3P4-202ENST00000540428 MDM4O15151 490 aa12.62□□□□□ -0.39
CBX3P4-202ENST00000540428 NDUFS2O75306 463 aa12.62□□□□□ -0.39
CBX3P4-202ENST00000540428 RHOBTB3O94955 611 aa12.62□□□□□ -0.39
CBX3P4-202ENST00000540428 KRT13P13646 458 aa12.62□□□□□ -0.39
CBX3P4-202ENST00000540428 GNSP15586 552 aa12.62□□□□□ -0.39
CBX3P4-202ENST00000540428 PFKFB1P16118 471 aa12.62□□□□□ -0.39
CBX3P4-202ENST00000540428 NR2F2P24468 414 aa12.62□□□□□ -0.39
CBX3P4-202ENST00000540428 GTF2H1P32780 548 aa12.62□□□□□ -0.39
CBX3P4-202ENST00000540428 MCCD1P59942 119 aaPredicted RBP12.62□□□□□ -0.39
CBX3P4-202ENST00000540428 ENPP2Q13822 863 aa12.62□□□□□ -0.39
CBX3P4-202ENST00000540428 WDR45BQ5MNZ6 344 aa12.62□□□□□ -0.39
CBX3P4-202ENST00000540428 SCD5Q86SK9 330 aa12.62□□□□□ -0.39
CBX3P4-202ENST00000540428 DEFB119Q8N690 84 aa12.62□□□□□ -0.39
CBX3P4-202ENST00000540428 CCDC47Q96A33 483 aaKnown RBP12.62□□□□□ -0.39
CBX3P4-202ENST00000540428 JAKMIP2Q96AA8 810 aa12.62□□□□□ -0.39
CBX3P4-202ENST00000540428 UBXN6Q9BZV1 441 aa12.62□□□□□ -0.39
CBX3P4-202ENST00000540428 FSCN3Q9NQT6 498 aa12.62□□□□□ -0.39
CBX3P4-202ENST00000540428 NUDT5Q9UKK9 219 aa12.62□□□□□ -0.39
CBX3P4-202ENST00000540428 RAD54BQ9Y620 910 aa12.62□□□□□ -0.39
CBX3P4-202ENST00000540428 STON1Q9Y6Q2 735 aa12.62□□□□□ -0.39
CBX3P4-202ENST00000540428 ASCC3Q8N3C0 2202 aaKnown RBP12.62□□□□□ -0.39
CBX3P4-202ENST00000540428 A0A1B0GVL5 298 aa12.61□□□□□ -0.39
CBX3P4-202ENST00000540428 SPAARA0A1B0GVQ0 90 aa12.61□□□□□ -0.39
CBX3P4-202ENST00000540428 HYAL3O43820 417 aaPredicted RBP12.61□□□□□ -0.39
CBX3P4-202ENST00000540428 GJB3O75712 270 aa12.61□□□□□ -0.39
CBX3P4-202ENST00000540428 KLKB1P03952 638 aa12.61□□□□□ -0.39
CBX3P4-202ENST00000540428 TRIM49P0CI25 452 aa12.61□□□□□ -0.39
CBX3P4-202ENST00000540428 TRIM49CP0CI26 452 aa12.61□□□□□ -0.39
CBX3P4-202ENST00000540428 CD59P13987 128 aa12.61□□□□□ -0.39
CBX3P4-202ENST00000540428 RPL13P26373 211 aaKnown RBP12.61□□□□□ -0.39
CBX3P4-202ENST00000540428 CD6P30203 668 aa12.61□□□□□ -0.39
CBX3P4-202ENST00000540428 PSMC2P35998 433 aaKnown RBP12.61□□□□□ -0.39
CBX3P4-202ENST00000540428 GCLMP48507 274 aa12.61□□□□□ -0.39
CBX3P4-202ENST00000540428 MFAP3P55082 362 aa12.61□□□□□ -0.39
CBX3P4-202ENST00000540428 PPP3CAQ08209 521 aa12.61□□□□□ -0.39
CBX3P4-202ENST00000540428 EIF4HQ15056 248 aaKnown RBP12.61□□□□□ -0.39
CBX3P4-202ENST00000540428 ZNF423Q2M1K9 1284 aa12.61□□□□□ -0.39
CBX3P4-202ENST00000540428 PPP1R26Q5T8A7 1209 aaPredicted RBP12.61□□□□□ -0.39
CBX3P4-202ENST00000540428 FYB2Q5VWT5 728 aa12.61□□□□□ -0.39
CBX3P4-202ENST00000540428 KRT39Q6A163 491 aa12.61□□□□□ -0.39
CBX3P4-202ENST00000540428 FAM186BQ8IYM0 893 aa12.61□□□□□ -0.39
CBX3P4-202ENST00000540428 RGL4Q8IZJ4 473 aa12.61□□□□□ -0.39
CBX3P4-202ENST00000540428 ARHGAP18Q8N392 663 aa12.61□□□□□ -0.39
CBX3P4-202ENST00000540428 CPXM2Q8N436 756 aa12.61□□□□□ -0.39
CBX3P4-202ENST00000540428 GUF1Q8N442 669 aaKnown RBP12.61□□□□□ -0.39
CBX3P4-202ENST00000540428 CADM4Q8NFZ8 388 aa12.61□□□□□ -0.39
CBX3P4-202ENST00000540428 UCMAQ8WVF2 138 aa12.61□□□□□ -0.39
CBX3P4-202ENST00000540428 ZDHHC5Q9C0B5 715 aa12.61□□□□□ -0.39
CBX3P4-202ENST00000540428 TMEM8AQ9HCN3 771 aa12.61□□□□□ -0.39
CBX3P4-202ENST00000540428 WSB2Q9NYS7 404 aaPredicted RBP12.61□□□□□ -0.39
CBX3P4-202ENST00000540428 PLK2Q9NYY3 685 aa12.61□□□□□ -0.39
CBX3P4-202ENST00000540428 USP36Q9P275 1121 aaKnown RBP12.61□□□□□ -0.39
CBX3P4-202ENST00000540428 THAP10Q9P2Z0 257 aaPredicted RBP12.61□□□□□ -0.39
CBX3P4-202ENST00000540428 GON4LQ3T8J9 2241 aa12.61□□□□□ -0.39
CBX3P4-202ENST00000540428 CHD6Q8TD26 2715 aa12.6□□□□□ -0.39
CBX3P4-202ENST00000540428 FAM237AA0A1B0GTK4 181 aa12.6□□□□□ -0.39
CBX3P4-202ENST00000540428 WASH3PC4AMC7 463 aa12.6□□□□□ -0.39
CBX3P4-202ENST00000540428 CD58P19256 250 aa12.6□□□□□ -0.39
CBX3P4-202ENST00000540428 SYKP43405 635 aa12.6□□□□□ -0.39
CBX3P4-202ENST00000540428 PKP1Q13835 747 aa12.6□□□□□ -0.39
CBX3P4-202ENST00000540428 PLEKHG6Q3KR16 790 aa12.6□□□□□ -0.39
CBX3P4-202ENST00000540428 FUT11Q495W5 492 aa12.6□□□□□ -0.39
CBX3P4-202ENST00000540428 RAB41Q5JT25 222 aa12.6□□□□□ -0.39
CBX3P4-202ENST00000540428 KIAA1324Q6UXG2 1013 aaKnown RBP12.6□□□□□ -0.39
CBX3P4-202ENST00000540428 ZCCHC14Q8WYQ9 949 aaKnown RBP12.6□□□□□ -0.39
CBX3P4-202ENST00000540428 DNASE2BQ8WZ79 361 aa12.6□□□□□ -0.39
CBX3P4-202ENST00000540428 BHMTQ93088 406 aa12.6□□□□□ -0.39
CBX3P4-202ENST00000540428 P2RY11Q96G91 374 aa12.6□□□□□ -0.39
CBX3P4-202ENST00000540428 HEXIM2Q96MH2 286 aaKnown RBP12.6□□□□□ -0.39
CBX3P4-202ENST00000540428 SLC2A11Q9BYW1 496 aa12.6□□□□□ -0.39
CBX3P4-202ENST00000540428 SLC6A17Q9H1V8 727 aa12.6□□□□□ -0.39
CBX3P4-202ENST00000540428 PRDM16Q9HAZ2 1276 aa12.6□□□□□ -0.39
CBX3P4-202ENST00000540428 CD93Q9NPY3 652 aa12.6□□□□□ -0.39
CBX3P4-202ENST00000540428 ITM2CQ9NQX7 267 aa12.6□□□□□ -0.39
CBX3P4-202ENST00000540428 RASAL2Q9UJF2 1139 aa12.6□□□□□ -0.39
CBX3P4-202ENST00000540428 KLK13Q9UKR3 277 aa12.6□□□□□ -0.39
CBX3P4-202ENST00000540428 STRIP2Q9ULQ0 834 aa12.6□□□□□ -0.39
CBX3P4-202ENST00000540428 FRYQ5TBA9 3013 aa12.6□□□□□ -0.39
CBX3P4-202ENST00000540428 PCDH15Q96QU1 1955 aa12.6□□□□□ -0.39
CBX3P4-202ENST00000540428 PCNX2A6NKB5 2137 aa12.59□□□□□ -0.39
CBX3P4-202ENST00000540428 A0A1B0GTW7 788 aa12.59□□□□□ -0.39
CBX3P4-202ENST00000540428 SRRM3A6NNA2 597 aaPredicted RBP12.59□□□□□ -0.39
CBX3P4-202ENST00000540428 IGLV3-19P01714 112 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms