RNA–Protein interactions for RNA: ENST00000540109.5

PTPRD-214, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 6,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-214ENST00000540109 PNMA3Q9UL41 463 aa6.25□□□□□ -1.41
PTPRD-214ENST00000540109 DMTF1Q9Y222 760 aa6.25□□□□□ -1.41
PTPRD-214ENST00000540109 KLHL20Q9Y2M5 609 aa6.25□□□□□ -1.41
PTPRD-214ENST00000540109 CAPN6Q9Y6Q1 641 aa6.25□□□□□ -1.41
PTPRD-214ENST00000540109 A0A087X0T9 212 aa6.24□□□□□ -1.41
PTPRD-214ENST00000540109 EXTL3O43909 919 aa6.24□□□□□ -1.41
PTPRD-214ENST00000540109 FAM228BP0C875 321 aa6.24□□□□□ -1.41
PTPRD-214ENST00000540109 JAK1P23458 1154 aa6.24□□□□□ -1.41
PTPRD-214ENST00000540109 PRIM2P49643 509 aa6.24□□□□□ -1.41
PTPRD-214ENST00000540109 POLGP54098 1239 aaPredicted RBP6.24□□□□□ -1.41
PTPRD-214ENST00000540109 TAP1Q03518 808 aa6.24□□□□□ -1.41
PTPRD-214ENST00000540109 CNPY1Q3B7I2 92 aa6.24□□□□□ -1.41
PTPRD-214ENST00000540109 RNF43Q68DV7 783 aa6.24□□□□□ -1.41
PTPRD-214ENST00000540109 CCDC149Q6ZUS6 474 aa6.24□□□□□ -1.41
PTPRD-214ENST00000540109 FASTKD5Q7L8L6 764 aaKnown RBP6.24□□□□□ -1.41
PTPRD-214ENST00000540109 ZNF571Q7Z3V5 609 aaPredicted RBP6.24□□□□□ -1.41
PTPRD-214ENST00000540109 CCNJLQ8IV13 435 aa6.24□□□□□ -1.41
PTPRD-214ENST00000540109 RASGEF1CQ8N431 466 aa6.24□□□□□ -1.41
PTPRD-214ENST00000540109 TPCN2Q8NHX9 752 aa6.24□□□□□ -1.41
PTPRD-214ENST00000540109 MTERF3Q96E29 417 aa6.24□□□□□ -1.41
PTPRD-214ENST00000540109 SLC10A4Q96EP9 437 aa6.24□□□□□ -1.41
PTPRD-214ENST00000540109 NIFKQ9BYG3 293 aaKnown RBP6.24□□□□□ -1.41
PTPRD-214ENST00000540109 MARCH7Q9H992 704 aa6.24□□□□□ -1.41
PTPRD-214ENST00000540109 TRPV5Q9NQA5 729 aa6.24□□□□□ -1.41
PTPRD-214ENST00000540109 AURKCQ9UQB9 309 aa6.24□□□□□ -1.41
PTPRD-214ENST00000540109 AFG3L2Q9Y4W6 797 aa6.24□□□□□ -1.41
PTPRD-214ENST00000540109 FADS3Q9Y5Q0 445 aa6.24□□□□□ -1.41
PTPRD-214ENST00000540109 A0A1B0GVG6 124 aa6.24□□□□□ -1.41
PTPRD-214ENST00000540109 ZNF233A6NK53 670 aa6.24□□□□□ -1.41
PTPRD-214ENST00000540109 CLIC2O15247 247 aa6.24□□□□□ -1.41
PTPRD-214ENST00000540109 PCNAP12004 261 aa6.24□□□□□ -1.41
PTPRD-214ENST00000540109 PSMC3P17980 439 aa6.24□□□□□ -1.41
PTPRD-214ENST00000540109 OSBPP22059 807 aa6.24□□□□□ -1.41
PTPRD-214ENST00000540109 KLHL12Q53G59 568 aa6.24□□□□□ -1.41
PTPRD-214ENST00000540109 EGFLAMQ63HQ2 1017 aa6.24□□□□□ -1.41
PTPRD-214ENST00000540109 SLC30A10Q6XR72 485 aa6.24□□□□□ -1.41
PTPRD-214ENST00000540109 KBTBD2Q8IY47 623 aa6.24□□□□□ -1.41
PTPRD-214ENST00000540109 USP38Q8NB14 1042 aa6.24□□□□□ -1.41
PTPRD-214ENST00000540109 LEMD2Q8NC56 503 aa6.24□□□□□ -1.41
PTPRD-214ENST00000540109 FBXL13Q8NEE6 735 aa6.24□□□□□ -1.41
PTPRD-214ENST00000540109 AENQ8WTP8 325 aaKnown RBP6.24□□□□□ -1.41
PTPRD-214ENST00000540109 AFG1LQ8WV93 481 aa6.24□□□□□ -1.41
PTPRD-214ENST00000540109 SLC7A3Q8WY07 619 aa6.24□□□□□ -1.41
PTPRD-214ENST00000540109 IRGQQ8WZA9 623 aa6.24□□□□□ -1.41
PTPRD-214ENST00000540109 PCDH18Q9HCL0 1135 aa6.24□□□□□ -1.41
PTPRD-214ENST00000540109 GPAMQ9HCL2 828 aa6.24□□□□□ -1.41
PTPRD-214ENST00000540109 COL20A1Q9P218 1284 aa6.24□□□□□ -1.41
PTPRD-214ENST00000540109 ENOPH1Q9UHY7 261 aa6.24□□□□□ -1.41
PTPRD-214ENST00000540109 SLC24A2Q9UI40 661 aa6.24□□□□□ -1.41
PTPRD-214ENST00000540109 ZNF214Q9UL59 606 aaPredicted RBP6.24□□□□□ -1.41
PTPRD-214ENST00000540109 WBP11Q9Y2W2 641 aaKnown RBP6.24□□□□□ -1.41
PTPRD-214ENST00000540109 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.24□□□□□ -1.41
PTPRD-214ENST00000540109 SGK1O00141 431 aa6.24□□□□□ -1.41
PTPRD-214ENST00000540109 ATG7O95352 703 aa6.24□□□□□ -1.41
PTPRD-214ENST00000540109 PLEKP08567 350 aaPredicted RBP6.24□□□□□ -1.41
PTPRD-214ENST00000540109 OCRLQ01968 901 aa6.24□□□□□ -1.41
PTPRD-214ENST00000540109 KRT17Q04695 432 aa6.24□□□□□ -1.41
PTPRD-214ENST00000540109 MKRN4PQ13434 485 aaPredicted RBP6.24□□□□□ -1.41
PTPRD-214ENST00000540109 MTDHQ86UE4 582 aaKnown RBP6.24□□□□□ -1.41
PTPRD-214ENST00000540109 DAW1Q8N136 415 aa6.24□□□□□ -1.41
PTPRD-214ENST00000540109 GDPD5Q8WTR4 605 aa6.24□□□□□ -1.41
PTPRD-214ENST00000540109 TP53INP1Q96A56 240 aa6.24□□□□□ -1.41
PTPRD-214ENST00000540109 LRRC39Q96DD0 335 aa6.24□□□□□ -1.41
PTPRD-214ENST00000540109 SNF8Q96H20 258 aa6.24□□□□□ -1.41
PTPRD-214ENST00000540109 PPP1R16BQ96T49 567 aa6.24□□□□□ -1.41
PTPRD-214ENST00000540109 TEX12Q9BXU0 123 aa6.24□□□□□ -1.41
PTPRD-214ENST00000540109 ZNF302Q9NR11 478 aa6.24□□□□□ -1.41
PTPRD-214ENST00000540109 C1orf112Q9NSG2 853 aa6.24□□□□□ -1.41
PTPRD-214ENST00000540109 PHTF1Q9UMS5 762 aa6.24□□□□□ -1.41
PTPRD-214ENST00000540109 STYXL1Q9Y6J8 313 aa6.24□□□□□ -1.41
PTPRD-214ENST00000540109 RCCD1A6NED2 376 aa6.24□□□□□ -1.41
PTPRD-214ENST00000540109 COPEO14579 308 aa6.24□□□□□ -1.41
PTPRD-214ENST00000540109 KRT36O76013 467 aa6.24□□□□□ -1.41
PTPRD-214ENST00000540109 CBX6O95503 412 aa6.24□□□□□ -1.41
PTPRD-214ENST00000540109 ABCB1P08183 1280 aaPredicted RBP6.24□□□□□ -1.41
PTPRD-214ENST00000540109 IL4RP24394 825 aa6.24□□□□□ -1.41
PTPRD-214ENST00000540109 PIK3CAP42336 1068 aa6.24□□□□□ -1.41
PTPRD-214ENST00000540109 CENPCQ03188 943 aa6.24□□□□□ -1.41
PTPRD-214ENST00000540109 TFDP1Q14186 410 aa6.24□□□□□ -1.41
PTPRD-214ENST00000540109 TFDP2Q14188 446 aa6.24□□□□□ -1.41
PTPRD-214ENST00000540109 CAPRIN1Q14444 709 aaKnown RBP6.24□□□□□ -1.41
PTPRD-214ENST00000540109 QPCTQ16769 361 aa6.24□□□□□ -1.41
PTPRD-214ENST00000540109 PLA2G4EQ3MJ16 856 aa6.24□□□□□ -1.41
PTPRD-214ENST00000540109 C6orf10Q5SRN2 563 aa6.24□□□□□ -1.41
PTPRD-214ENST00000540109 ANGEL2Q5VTE6 544 aaKnown RBP6.24□□□□□ -1.41
PTPRD-214ENST00000540109 ZPBP2Q6X784 338 aa6.24□□□□□ -1.41
PTPRD-214ENST00000540109 SULF1Q8IWU6 871 aa6.24□□□□□ -1.41
PTPRD-214ENST00000540109 TMEM161BQ8NDZ6 487 aa6.24□□□□□ -1.41
PTPRD-214ENST00000540109 EPS8L3Q8TE67 593 aaKnown RBP6.24□□□□□ -1.41
PTPRD-214ENST00000540109 OSCP1Q8WVF1 389 aa6.24□□□□□ -1.41
PTPRD-214ENST00000540109 TATDN2Q93075 761 aa6.24□□□□□ -1.41
PTPRD-214ENST00000540109 EFHD2Q96C19 240 aaPredicted RBP6.24□□□□□ -1.41
PTPRD-214ENST00000540109 COX4I2Q96KJ9 171 aa6.24□□□□□ -1.41
PTPRD-214ENST00000540109 CELF4Q9BZC1 486 aaKnown RBP6.24□□□□□ -1.41
PTPRD-214ENST00000540109 CYP26B1Q9NR63 512 aa6.24□□□□□ -1.41
PTPRD-214ENST00000540109 NMRK1Q9NWW6 199 aa6.24□□□□□ -1.41
PTPRD-214ENST00000540109 AK5Q9Y6K8 562 aa6.24□□□□□ -1.41
PTPRD-214ENST00000540109 EMSYQ7Z589 1322 aa6.24□□□□□ -1.41
PTPRD-214ENST00000540109 TYW5A2RUC4 315 aaKnown RBP6.24□□□□□ -1.41
PTPRD-214ENST00000540109 FAM153BP0C7A2 387 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms