RNA–Protein interactions for RNA: ENST00000539784.1

TSPAN9-IT1-201, TSPAN9 intronic transcript 1, humanhuman

TSL 4 BASIC

Gene TSPAN9-IT1, Length 562 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-IT1-201ENST00000539784 TRMT11Q7Z4G4 463 aaKnown RBP13.36□□□□□ -0.27
TSPAN9-IT1-201ENST00000539784 ARHGEF19Q8IW93 802 aa13.36□□□□□ -0.27
TSPAN9-IT1-201ENST00000539784 SIX6OS1Q8N1H7 587 aa13.36□□□□□ -0.27
TSPAN9-IT1-201ENST00000539784 RNF139Q8WU17 664 aa13.36□□□□□ -0.27
TSPAN9-IT1-201ENST00000539784 TFAP2BQ92481 460 aa13.36□□□□□ -0.27
TSPAN9-IT1-201ENST00000539784 EDEM1Q92611 657 aa13.36□□□□□ -0.27
TSPAN9-IT1-201ENST00000539784 TCEAL3Q969E4 200 aa13.36□□□□□ -0.27
TSPAN9-IT1-201ENST00000539784 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.36□□□□□ -0.27
TSPAN9-IT1-201ENST00000539784 YJEFN3A6XGL0 299 aa13.35□□□□□ -0.27
TSPAN9-IT1-201ENST00000539784 PRRT4C9JH25 899 aa13.35□□□□□ -0.27
TSPAN9-IT1-201ENST00000539784 E7ENQ6 273 aa13.35□□□□□ -0.27
TSPAN9-IT1-201ENST00000539784 M0QYV0 167 aa13.35□□□□□ -0.27
TSPAN9-IT1-201ENST00000539784 RNF225M0QZC1 329 aaPredicted RBP13.35□□□□□ -0.27
TSPAN9-IT1-201ENST00000539784 MAP3K13O43283 966 aa13.35□□□□□ -0.27
TSPAN9-IT1-201ENST00000539784 AFPP02771 609 aaKnown RBP13.35□□□□□ -0.27
TSPAN9-IT1-201ENST00000539784 PAEPP09466 180 aa13.35□□□□□ -0.27
TSPAN9-IT1-201ENST00000539784 ZNF806P0C7X5 589 aa13.35□□□□□ -0.27
TSPAN9-IT1-201ENST00000539784 SETSIPP0DME0 302 aa13.35□□□□□ -0.27
TSPAN9-IT1-201ENST00000539784 HOXB2P14652 356 aa13.35□□□□□ -0.27
TSPAN9-IT1-201ENST00000539784 DHPSP49366 369 aaPredicted RBP13.35□□□□□ -0.27
TSPAN9-IT1-201ENST00000539784 UBE2HP62256 183 aa13.35□□□□□ -0.27
TSPAN9-IT1-201ENST00000539784 PM20D1Q6GTS8 502 aa13.35□□□□□ -0.27
TSPAN9-IT1-201ENST00000539784 BHLHA9Q7RTU4 235 aa13.35□□□□□ -0.27
TSPAN9-IT1-201ENST00000539784 TRIM59Q8IWR1 403 aa13.35□□□□□ -0.27
TSPAN9-IT1-201ENST00000539784 CHPFQ8IZ52 775 aa13.35□□□□□ -0.27
TSPAN9-IT1-201ENST00000539784 ZNF276Q8N554 614 aa13.35□□□□□ -0.27
TSPAN9-IT1-201ENST00000539784 FRMD1Q8N878 549 aa13.35□□□□□ -0.27
TSPAN9-IT1-201ENST00000539784 RBBP8NLQ8NC74 664 aaPredicted RBP13.35□□□□□ -0.27
TSPAN9-IT1-201ENST00000539784 LMO3Q8TAP4 145 aa13.35□□□□□ -0.27
TSPAN9-IT1-201ENST00000539784 P2RY11Q96G91 374 aa13.35□□□□□ -0.27
TSPAN9-IT1-201ENST00000539784 SPACA7Q96KW9 195 aa13.35□□□□□ -0.27
TSPAN9-IT1-201ENST00000539784 ACOX2Q99424 681 aa13.35□□□□□ -0.27
TSPAN9-IT1-201ENST00000539784 DCLK3Q9C098 648 aa13.35□□□□□ -0.27
TSPAN9-IT1-201ENST00000539784 RXFP3Q9NSD7 469 aa13.35□□□□□ -0.27
TSPAN9-IT1-201ENST00000539784 MARK1Q9P0L2 795 aa13.35□□□□□ -0.27
TSPAN9-IT1-201ENST00000539784 SFMBT1Q9UHJ3 866 aa13.35□□□□□ -0.27
TSPAN9-IT1-201ENST00000539784 AGO1Q9UL18 857 aaKnown RBP13.35□□□□□ -0.27
TSPAN9-IT1-201ENST00000539784 HCN2Q9UL51 889 aa13.35□□□□□ -0.27
TSPAN9-IT1-201ENST00000539784 KIAA1257Q9ULG3 409 aa13.35□□□□□ -0.27
TSPAN9-IT1-201ENST00000539784 ZNF510Q9Y2H8 683 aa13.35□□□□□ -0.27
TSPAN9-IT1-201ENST00000539784 PCDHGA5Q9Y5G8 931 aa13.35□□□□□ -0.27
TSPAN9-IT1-201ENST00000539784 DCHS1Q96JQ0 3298 aa13.35□□□□□ -0.27
TSPAN9-IT1-201ENST00000539784 SLC30A4O14863 429 aa13.34□□□□□ -0.27
TSPAN9-IT1-201ENST00000539784 PMM2O15305 246 aa13.34□□□□□ -0.27
TSPAN9-IT1-201ENST00000539784 P4HA2O15460 535 aa13.34□□□□□ -0.27
TSPAN9-IT1-201ENST00000539784 FOXD2O60548 495 aaPredicted RBP13.34□□□□□ -0.27
TSPAN9-IT1-201ENST00000539784 CAVIN2O95810 425 aa13.34□□□□□ -0.27
TSPAN9-IT1-201ENST00000539784 GNA14O95837 355 aa13.34□□□□□ -0.27
TSPAN9-IT1-201ENST00000539784 KRT5P13647 590 aa13.34□□□□□ -0.27
TSPAN9-IT1-201ENST00000539784 NTSR1P30989 418 aa13.34□□□□□ -0.27
TSPAN9-IT1-201ENST00000539784 CHKAP35790 457 aa13.34□□□□□ -0.27
TSPAN9-IT1-201ENST00000539784 BSPRYQ5W0U4 402 aa13.34□□□□□ -0.27
TSPAN9-IT1-201ENST00000539784 PMS2CLQ68D20 193 aa13.34□□□□□ -0.27
TSPAN9-IT1-201ENST00000539784 IL31Q6EBC2 164 aa13.34□□□□□ -0.27
TSPAN9-IT1-201ENST00000539784 SDE2Q6IQ49 451 aa13.34□□□□□ -0.27
TSPAN9-IT1-201ENST00000539784 LCLAT1Q6UWP7 414 aa13.34□□□□□ -0.27
TSPAN9-IT1-201ENST00000539784 ARMCX6Q7L4S7 300 aa13.34□□□□□ -0.27
TSPAN9-IT1-201ENST00000539784 CYP2U1Q7Z449 544 aa13.34□□□□□ -0.27
TSPAN9-IT1-201ENST00000539784 C11orf74Q86VG3 221 aa13.34□□□□□ -0.27
TSPAN9-IT1-201ENST00000539784 FMNL3Q8IVF7 1028 aa13.34□□□□□ -0.27
TSPAN9-IT1-201ENST00000539784 EHBP1Q8NDI1 1231 aa13.34□□□□□ -0.27
TSPAN9-IT1-201ENST00000539784 ZSWIM1Q9BR11 485 aa13.34□□□□□ -0.27
TSPAN9-IT1-201ENST00000539784 INTS2Q9H0H0 1204 aaKnown RBP13.34□□□□□ -0.27
TSPAN9-IT1-201ENST00000539784 VPS45Q9NRW7 570 aa13.34□□□□□ -0.27
TSPAN9-IT1-201ENST00000539784 OLA1Q9NTK5 396 aaKnown RBP13.34□□□□□ -0.27
TSPAN9-IT1-201ENST00000539784 CACNA2D2Q9NY47 1150 aa13.34□□□□□ -0.27
TSPAN9-IT1-201ENST00000539784 CHMP5Q9NZZ3 219 aa13.34□□□□□ -0.27
TSPAN9-IT1-201ENST00000539784 KIAA1468Q9P260 1216 aa13.34□□□□□ -0.27
TSPAN9-IT1-201ENST00000539784 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.34□□□□□ -0.27
TSPAN9-IT1-201ENST00000539784 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.33□□□□□ -0.28
TSPAN9-IT1-201ENST00000539784 BCLAF3A2AJT9 711 aaKnown RBP13.33□□□□□ -0.28
TSPAN9-IT1-201ENST00000539784 ZBTB24O43167 697 aaPredicted RBP13.33□□□□□ -0.28
TSPAN9-IT1-201ENST00000539784 MSI1O43347 362 aaKnown RBP13.33□□□□□ -0.28
TSPAN9-IT1-201ENST00000539784 TSPAN3O60637 253 aa13.33□□□□□ -0.28
TSPAN9-IT1-201ENST00000539784 FGFR1OPO95684 399 aaKnown RBP13.33□□□□□ -0.28
TSPAN9-IT1-201ENST00000539784 CYBBP04839 570 aa13.33□□□□□ -0.28
TSPAN9-IT1-201ENST00000539784 CISD3P0C7P0 127 aa13.33□□□□□ -0.28
TSPAN9-IT1-201ENST00000539784 GABRG2P18507 467 aa13.33□□□□□ -0.28
TSPAN9-IT1-201ENST00000539784 P2RY2P41231 377 aa13.33□□□□□ -0.28
TSPAN9-IT1-201ENST00000539784 DAOAP59103 153 aa13.33□□□□□ -0.28
TSPAN9-IT1-201ENST00000539784 PKDCCQ504Y2 493 aa13.33□□□□□ -0.28
TSPAN9-IT1-201ENST00000539784 PLA2G2CQ5R387 149 aa13.33□□□□□ -0.28
TSPAN9-IT1-201ENST00000539784 FYB2Q5VWT5 728 aa13.33□□□□□ -0.28
TSPAN9-IT1-201ENST00000539784 PMF1Q6P1K2 205 aa13.33□□□□□ -0.28
TSPAN9-IT1-201ENST00000539784 FOXR2Q6PJQ5 311 aa13.33□□□□□ -0.28
TSPAN9-IT1-201ENST00000539784 TMEFF1Q8IYR6 380 aa13.33□□□□□ -0.28
TSPAN9-IT1-201ENST00000539784 TRIML1Q8N9V2 468 aa13.33□□□□□ -0.28
TSPAN9-IT1-201ENST00000539784 OLIG1Q8TAK6 271 aa13.33□□□□□ -0.28
TSPAN9-IT1-201ENST00000539784 KCNV2Q8TDN2 545 aa13.33□□□□□ -0.28
TSPAN9-IT1-201ENST00000539784 CLEC4CQ8WTT0 213 aa13.33□□□□□ -0.28
TSPAN9-IT1-201ENST00000539784 DDI1Q8WTU0 396 aa13.33□□□□□ -0.28
TSPAN9-IT1-201ENST00000539784 KCTD13Q8WZ19 329 aa13.33□□□□□ -0.28
TSPAN9-IT1-201ENST00000539784 PLD4Q96BZ4 506 aa13.33□□□□□ -0.28
TSPAN9-IT1-201ENST00000539784 KREMEN1Q96MU8 473 aa13.33□□□□□ -0.28
TSPAN9-IT1-201ENST00000539784 MIS12Q9H081 205 aa13.33□□□□□ -0.28
TSPAN9-IT1-201ENST00000539784 RAD54BQ9Y620 910 aa13.33□□□□□ -0.28
TSPAN9-IT1-201ENST00000539784 SPAG17Q6Q759 2223 aa13.32□□□□□ -0.28
TSPAN9-IT1-201ENST00000539784 WASH3PC4AMC7 463 aa13.32□□□□□ -0.28
TSPAN9-IT1-201ENST00000539784 GABBR2O75899 941 aa13.32□□□□□ -0.28
TSPAN9-IT1-201ENST00000539784 PENKP01210 267 aaPredicted RBP13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms