RNA–Protein interactions for RNA: ENST00000539737.6

USB1-203, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,212 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-203ENST00000539737 TPGS1Q6ZTW0 290 aa15.77■□□□□ 0.12
USB1-203ENST00000539737 FAM35AQ86V20 835 aa15.77■□□□□ 0.12
USB1-203ENST00000539737 NUP93Q8N1F7 819 aa15.77■□□□□ 0.12
USB1-203ENST00000539737 B3GALNT2Q8NCR0 500 aa15.77■□□□□ 0.12
USB1-203ENST00000539737 CEP295NLQ96MC4 621 aa15.77■□□□□ 0.12
USB1-203ENST00000539737 CEP63Q96MT8 703 aa15.77■□□□□ 0.12
USB1-203ENST00000539737 SLITRK1Q96PX8 696 aa15.77■□□□□ 0.12
USB1-203ENST00000539737 MED10Q9BTT4 135 aa15.77■□□□□ 0.12
USB1-203ENST00000539737 SPHK2Q9NRA0 654 aa15.77■□□□□ 0.12
USB1-203ENST00000539737 DNAJC17Q9NVM6 304 aaKnown RBP15.77■□□□□ 0.12
USB1-203ENST00000539737 PLK2Q9NYY3 685 aa15.77■□□□□ 0.12
USB1-203ENST00000539737 KNL1Q8NG31 2342 aa15.77■□□□□ 0.11
USB1-203ENST00000539737 NEDD8-MDP1E9PL57 170 aa15.76■□□□□ 0.11
USB1-203ENST00000539737 ARHGAP33O14559 1287 aa15.76■□□□□ 0.11
USB1-203ENST00000539737 SLC9A3R1O14745 358 aaPredicted RBP15.76■□□□□ 0.11
USB1-203ENST00000539737 STX10O60499 249 aa15.76■□□□□ 0.11
USB1-203ENST00000539737 STAU1O95793 577 aaKnown RBP15.76■□□□□ 0.11
USB1-203ENST00000539737 SERPINF2P08697 491 aa15.76■□□□□ 0.11
USB1-203ENST00000539737 P4HA1P13674 534 aa15.76■□□□□ 0.11
USB1-203ENST00000539737 EIF2DP41214 584 aaKnown RBP15.76■□□□□ 0.11
USB1-203ENST00000539737 TTI2Q6NXR4 508 aa15.76■□□□□ 0.11
USB1-203ENST00000539737 KIAA1324Q6UXG2 1013 aaKnown RBP15.76■□□□□ 0.11
USB1-203ENST00000539737 GPRIN1Q7Z2K8 1008 aa15.76■□□□□ 0.11
USB1-203ENST00000539737 RAB44Q7Z6P3 723 aaPredicted RBP15.76■□□□□ 0.11
USB1-203ENST00000539737 PROSER1Q86XN7 944 aa15.76■□□□□ 0.11
USB1-203ENST00000539737 RGL4Q8IZJ4 473 aa15.76■□□□□ 0.11
USB1-203ENST00000539737 MLKLQ8NB16 471 aa15.76■□□□□ 0.11
USB1-203ENST00000539737 ZMIZ2Q8NF64 920 aa15.76■□□□□ 0.11
USB1-203ENST00000539737 CCDC26Q8TAB7 109 aa15.76■□□□□ 0.11
USB1-203ENST00000539737 IPO4Q8TEX9 1081 aaKnown RBP15.76■□□□□ 0.11
USB1-203ENST00000539737 CRELD1Q96HD1 420 aa15.76■□□□□ 0.11
USB1-203ENST00000539737 XYLT2Q9H1B5 865 aa15.76■□□□□ 0.11
USB1-203ENST00000539737 OSER1Q9NX31 292 aa15.76■□□□□ 0.11
USB1-203ENST00000539737 DEC1Q9P2X7 70 aa15.76■□□□□ 0.11
USB1-203ENST00000539737 DACH1Q9UI36 760 aa15.76■□□□□ 0.11
USB1-203ENST00000539737 SLCO1B1Q9Y6L6 691 aa15.76■□□□□ 0.11
USB1-203ENST00000539737 MYH10P35580 1976 aa15.76■□□□□ 0.11
USB1-203ENST00000539737 ATP8B3O60423 1300 aa15.75■□□□□ 0.11
USB1-203ENST00000539737 E2F8A0AVK6 867 aa15.75■□□□□ 0.11
USB1-203ENST00000539737 HOXC11O43248 304 aaPredicted RBP15.75■□□□□ 0.11
USB1-203ENST00000539737 AP5Z1O43299 807 aa15.75■□□□□ 0.11
USB1-203ENST00000539737 GREM1O60565 184 aa15.75■□□□□ 0.11
USB1-203ENST00000539737 TACC1O75410 805 aa15.75■□□□□ 0.11
USB1-203ENST00000539737 FTH1P19P0C7X4 201 aa15.75■□□□□ 0.11
USB1-203ENST00000539737 GTF2H1P32780 548 aa15.75■□□□□ 0.11
USB1-203ENST00000539737 DLG4P78352 724 aa15.75■□□□□ 0.11
USB1-203ENST00000539737 PLEKHG6Q3KR16 790 aa15.75■□□□□ 0.11
USB1-203ENST00000539737 ZACNQ401N2 412 aa15.75■□□□□ 0.11
USB1-203ENST00000539737 SOWAHCQ53LP3 525 aaPredicted RBP15.75■□□□□ 0.11
USB1-203ENST00000539737 HECTD3Q5T447 861 aa15.75■□□□□ 0.11
USB1-203ENST00000539737 SLCO6A1Q86UG4 719 aa15.75■□□□□ 0.11
USB1-203ENST00000539737 CHPFQ8IZ52 775 aa15.75■□□□□ 0.11
USB1-203ENST00000539737 BBC3Q96PG8 261 aaPredicted RBP15.75■□□□□ 0.11
USB1-203ENST00000539737 ELOVL4Q9GZR5 314 aa15.75■□□□□ 0.11
USB1-203ENST00000539737 METTL14Q9HCE5 456 aaKnown RBP15.75■□□□□ 0.11
USB1-203ENST00000539737 KRT82Q9NSB4 513 aa15.75■□□□□ 0.11
USB1-203ENST00000539737 GPSM3Q9Y4H4 160 aa15.75■□□□□ 0.11
USB1-203ENST00000539737 NUMA1Q14980 2115 aa15.74■□□□□ 0.11
USB1-203ENST00000539737 SETXQ7Z333 2677 aaKnown RBP15.74■□□□□ 0.11
USB1-203ENST00000539737 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.74■□□□□ 0.11
USB1-203ENST00000539737 GJB3O75712 270 aa15.74■□□□□ 0.11
USB1-203ENST00000539737 FGFR1OPO95684 399 aaKnown RBP15.74■□□□□ 0.11
USB1-203ENST00000539737 C4BPAP04003 597 aaKnown RBP15.74■□□□□ 0.11
USB1-203ENST00000539737 TRIM49P0CI25 452 aa15.74■□□□□ 0.11
USB1-203ENST00000539737 TRIM49CP0CI26 452 aa15.74■□□□□ 0.11
USB1-203ENST00000539737 PFKLP17858 780 aa15.74■□□□□ 0.11
USB1-203ENST00000539737 NTSR1P30989 418 aa15.74■□□□□ 0.11
USB1-203ENST00000539737 MCCD1P59942 119 aaPredicted RBP15.74■□□□□ 0.11
USB1-203ENST00000539737 GRIK2Q13002 908 aa15.74■□□□□ 0.11
USB1-203ENST00000539737 NCOA4Q13772 614 aa15.74■□□□□ 0.11
USB1-203ENST00000539737 TRIP6Q15654 476 aaKnown RBP15.74■□□□□ 0.11
USB1-203ENST00000539737 ZNF699Q32M78 642 aa15.74■□□□□ 0.11
USB1-203ENST00000539737 BTBD8Q5XKL5 378 aa15.74■□□□□ 0.11
USB1-203ENST00000539737 GRAMD4Q6IC98 578 aa15.74■□□□□ 0.11
USB1-203ENST00000539737 ACOT1Q86TX2 421 aa15.74■□□□□ 0.11
USB1-203ENST00000539737 ZCCHC9Q8N567 271 aaKnown RBP15.74■□□□□ 0.11
USB1-203ENST00000539737 HNRNPLLQ8WVV9 542 aaKnown RBP15.74■□□□□ 0.11
USB1-203ENST00000539737 EEF2KMTQ96G04 330 aa15.74■□□□□ 0.11
USB1-203ENST00000539737 SMOQ99835 787 aa15.74■□□□□ 0.11
USB1-203ENST00000539737 IMPG2Q9BZV3 1241 aa15.74■□□□□ 0.11
USB1-203ENST00000539737 DNAI2Q9GZS0 605 aa15.74■□□□□ 0.11
USB1-203ENST00000539737 VRTNQ9H8Y1 702 aa15.74■□□□□ 0.11
USB1-203ENST00000539737 TMEM8AQ9HCN3 771 aa15.74■□□□□ 0.11
USB1-203ENST00000539737 ARMCX3Q9UH62 379 aaPredicted RBP15.74■□□□□ 0.11
USB1-203ENST00000539737 RWDD2AQ9UIY3 292 aa15.74■□□□□ 0.11
USB1-203ENST00000539737 PTPRBP23467 1997 aa15.74■□□□□ 0.11
USB1-203ENST00000539737 GOLGA8CPA6NN73 597 aa15.73■□□□□ 0.11
USB1-203ENST00000539737 AP1G2O75843 785 aa15.73■□□□□ 0.11
USB1-203ENST00000539737 GNA14O95837 355 aa15.73■□□□□ 0.11
USB1-203ENST00000539737 TYRP14679 529 aa15.73■□□□□ 0.11
USB1-203ENST00000539737 PTMSP20962 102 aa15.73■□□□□ 0.11
USB1-203ENST00000539737 PIK3CAP42336 1068 aa15.73■□□□□ 0.11
USB1-203ENST00000539737 PPP3CCP48454 512 aa15.73■□□□□ 0.11
USB1-203ENST00000539737 MXI1P50539 228 aa15.73■□□□□ 0.11
USB1-203ENST00000539737 BNC1Q01954 994 aa15.73■□□□□ 0.11
USB1-203ENST00000539737 CCDC40Q4G0X9 1142 aa15.73■□□□□ 0.11
USB1-203ENST00000539737 HSF5Q4G112 596 aaPredicted RBP15.73■□□□□ 0.11
USB1-203ENST00000539737 DCAF17Q5H9S7 520 aaPredicted RBP15.73■□□□□ 0.11
USB1-203ENST00000539737 ZNF667Q5HYK9 610 aa15.73■□□□□ 0.11
USB1-203ENST00000539737 C1orf220Q5T0J3 134 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms