RNA–Protein interactions for RNA: ENST00000539208.5

GNE-204, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 2 BASIC

Gene GNE, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-204ENST00000539208 RMDN2Q96LZ7 410 aa18.57■□□□□ 0.56
GNE-204ENST00000539208 ZC3H7BQ9UGR2 993 aaKnown RBP18.57■□□□□ 0.56
GNE-204ENST00000539208 ZNF180Q9UJW8 692 aa18.57■□□□□ 0.56
GNE-204ENST00000539208 TTLL3Q9Y4R7 772 aa18.57■□□□□ 0.56
GNE-204ENST00000539208 TRIP12Q14669 1992 aaPredicted RBP18.57■□□□□ 0.56
GNE-204ENST00000539208 MGRN1O60291 552 aa18.57■□□□□ 0.56
GNE-204ENST00000539208 DGKIO75912 1065 aa18.57■□□□□ 0.56
GNE-204ENST00000539208 PIAS1O75925 651 aa18.57■□□□□ 0.56
GNE-204ENST00000539208 APRTP07741 180 aa18.57■□□□□ 0.56
GNE-204ENST00000539208 PTPN1P18031 435 aaKnown RBP18.57■□□□□ 0.56
GNE-204ENST00000539208 NCALDP61601 193 aa18.57■□□□□ 0.56
GNE-204ENST00000539208 MRPS5P82675 430 aaKnown RBP18.57■□□□□ 0.56
GNE-204ENST00000539208 PURAQ00577 322 aaKnown RBP18.57■□□□□ 0.56
GNE-204ENST00000539208 NCBP2-AS2Q69YL0 99 aa18.57■□□□□ 0.56
GNE-204ENST00000539208 KCNT2Q6UVM3 1135 aa18.57■□□□□ 0.56
GNE-204ENST00000539208 PARP9Q8IXQ6 854 aa18.57■□□□□ 0.56
GNE-204ENST00000539208 DEFB106AQ8N104 65 aa18.57■□□□□ 0.56
GNE-204ENST00000539208 ZNF276Q8N554 614 aa18.57■□□□□ 0.56
GNE-204ENST00000539208 TCP10LQ8TDR4 215 aa18.57■□□□□ 0.56
GNE-204ENST00000539208 OLFM3Q96PB7 478 aa18.57■□□□□ 0.56
GNE-204ENST00000539208 DTLQ9NZJ0 730 aa18.57■□□□□ 0.56
GNE-204ENST00000539208 CYB561D2O14569 222 aa18.56■□□□□ 0.56
GNE-204ENST00000539208 MAP3K6O95382 1288 aa18.56■□□□□ 0.56
GNE-204ENST00000539208 NPR3P17342 541 aa18.56■□□□□ 0.56
GNE-204ENST00000539208 NOS2P35228 1153 aa18.56■□□□□ 0.56
GNE-204ENST00000539208 ARL4AP40617 200 aa18.56■□□□□ 0.56
GNE-204ENST00000539208 RGS2P41220 211 aa18.56■□□□□ 0.56
GNE-204ENST00000539208 SKIV2L2P42285 1042 aaKnown RBP18.56■□□□□ 0.56
GNE-204ENST00000539208 SEPT7Q16181 437 aaKnown RBP18.56■□□□□ 0.56
GNE-204ENST00000539208 FSCN1Q16658 493 aaKnown RBP18.56■□□□□ 0.56
GNE-204ENST00000539208 SYCP2LQ5T4T6 812 aa18.56■□□□□ 0.56
GNE-204ENST00000539208 TWF2Q6IBS0 349 aaKnown RBP18.56■□□□□ 0.56
GNE-204ENST00000539208 FAM228AQ86W67 206 aa18.56■□□□□ 0.56
GNE-204ENST00000539208 SPOCK2Q92563 424 aa18.56■□□□□ 0.56
GNE-204ENST00000539208 APBB2Q92870 758 aa18.56■□□□□ 0.56
GNE-204ENST00000539208 GGT7Q9UJ14 662 aa18.56■□□□□ 0.56
GNE-204ENST00000539208 USH1CQ9Y6N9 552 aa18.56■□□□□ 0.56
GNE-204ENST00000539208 DOCK3Q8IZD9 2030 aa18.55■□□□□ 0.56
GNE-204ENST00000539208 IGF2BP3O00425 579 aaKnown RBP eCLIP18.55■□□□□ 0.56
GNE-204ENST00000539208 METTL18O95568 372 aa18.55■□□□□ 0.56
GNE-204ENST00000539208 ADRA1DP25100 572 aa18.55■□□□□ 0.56
GNE-204ENST00000539208 ELF3P78545 371 aaPredicted RBP18.55■□□□□ 0.56
GNE-204ENST00000539208 ADIGQ0VDE8 80 aa18.55■□□□□ 0.56
GNE-204ENST00000539208 FAAP100Q0VG06 881 aa18.55■□□□□ 0.56
GNE-204ENST00000539208 SEMA5AQ13591 1074 aa18.55■□□□□ 0.56
GNE-204ENST00000539208 FAXCQ5TGI0 409 aa18.55■□□□□ 0.56
GNE-204ENST00000539208 TTC39BQ5VTQ0 682 aaPredicted RBP18.55■□□□□ 0.56
GNE-204ENST00000539208 PAQR9Q6ZVX9 377 aa18.55■□□□□ 0.56
GNE-204ENST00000539208 LRRC6Q86X45 466 aa18.55■□□□□ 0.56
GNE-204ENST00000539208 NPY6RQ99463 290 aa18.55■□□□□ 0.56
GNE-204ENST00000539208 MAGEB5Q9BZ81 275 aa18.55■□□□□ 0.56
GNE-204ENST00000539208 ECT2Q9H8V3 914 aa18.55■□□□□ 0.56
GNE-204ENST00000539208 PLAC1Q9HBJ0 212 aa18.55■□□□□ 0.56
GNE-204ENST00000539208 XAB2Q9HCS7 855 aaKnown RBP18.55■□□□□ 0.56
GNE-204ENST00000539208 SLCO1B3Q9NPD5 702 aa18.55■□□□□ 0.56
GNE-204ENST00000539208 DHRS4L1P0CG22 281 aa18.55■□□□□ 0.56
GNE-204ENST00000539208 SULT1E1P49888 294 aa18.55■□□□□ 0.56
GNE-204ENST00000539208 NEK3P51956 506 aa18.55■□□□□ 0.56
GNE-204ENST00000539208 HEATR6Q6AI08 1181 aaKnown RBP18.55■□□□□ 0.56
GNE-204ENST00000539208 PRPF39Q86UA1 669 aaKnown RBP18.55■□□□□ 0.56
GNE-204ENST00000539208 HACE1Q8IYU2 909 aa18.55■□□□□ 0.56
GNE-204ENST00000539208 TFB1MQ8WVM0 346 aaKnown RBP18.55■□□□□ 0.56
GNE-204ENST00000539208 CFAP36Q96G28 342 aa18.55■□□□□ 0.56
GNE-204ENST00000539208 APOPT1Q96IL0 206 aa18.55■□□□□ 0.56
GNE-204ENST00000539208 SIGLEC10Q96LC7 697 aa18.55■□□□□ 0.56
GNE-204ENST00000539208 APBA2Q99767 749 aa18.55■□□□□ 0.56
GNE-204ENST00000539208 SLC38A7Q9NVC3 462 aa18.55■□□□□ 0.56
GNE-204ENST00000539208 KPNA6O60684 536 aa18.54■□□□□ 0.56
GNE-204ENST00000539208 GOT1P17174 413 aa18.54■□□□□ 0.56
GNE-204ENST00000539208 AMPD1P23109 780 aa18.54■□□□□ 0.56
GNE-204ENST00000539208 CDK16Q00536 496 aa18.54■□□□□ 0.56
GNE-204ENST00000539208 TAF1CQ15572 869 aaPredicted RBP18.54■□□□□ 0.56
GNE-204ENST00000539208 OTUD1Q5VV17 481 aaPredicted RBP18.54■□□□□ 0.56
GNE-204ENST00000539208 C17orf99Q6UX52 265 aa18.54■□□□□ 0.56
GNE-204ENST00000539208 ZNF534Q76KX8 674 aa18.54■□□□□ 0.56
GNE-204ENST00000539208 ZNF398Q8TD17 642 aa18.54■□□□□ 0.56
GNE-204ENST00000539208 SERAC1Q96JX3 654 aa18.54■□□□□ 0.56
GNE-204ENST00000539208 SLC2A13Q96QE2 648 aa18.54■□□□□ 0.56
GNE-204ENST00000539208 SF3B1O75533 1304 aaKnown RBP eCLIP18.54■□□□□ 0.568e-6■■■■■ 107
GNE-204ENST00000539208 MANSC4A6NHS7 340 aaPredicted RBP18.54■□□□□ 0.56
GNE-204ENST00000539208 LPXNO60711 386 aa18.54■□□□□ 0.56
GNE-204ENST00000539208 APOEP02649 317 aa18.54■□□□□ 0.56
GNE-204ENST00000539208 CYP2B6P20813 491 aa18.54■□□□□ 0.56
GNE-204ENST00000539208 ALDH3A1P30838 453 aa18.54■□□□□ 0.56
GNE-204ENST00000539208 DCAF6Q58WW2 860 aa18.54■□□□□ 0.56
GNE-204ENST00000539208 LGSNQ5TDP6 509 aa18.54■□□□□ 0.56
GNE-204ENST00000539208 CST9Q5W186 159 aa18.54■□□□□ 0.56
GNE-204ENST00000539208 WSCD1Q658N2 575 aa18.54■□□□□ 0.56
GNE-204ENST00000539208 CLEC20AQ6ZU45 233 aa18.54■□□□□ 0.56
GNE-204ENST00000539208 CYS1Q717R9 158 aa18.54■□□□□ 0.56
GNE-204ENST00000539208 OTOAQ7RTW8 1153 aa18.54■□□□□ 0.56
GNE-204ENST00000539208 CHSY1Q86X52 802 aa18.54■□□□□ 0.56
GNE-204ENST00000539208 FAM131BQ86XD5 332 aa18.54■□□□□ 0.56
GNE-204ENST00000539208 HTR3CQ8WXA8 447 aa18.54■□□□□ 0.56
GNE-204ENST00000539208 FAM149B1Q96BN6 582 aa18.54■□□□□ 0.56
GNE-204ENST00000539208 EBNA1BP2Q99848 306 aaKnown RBP18.54■□□□□ 0.56
GNE-204ENST00000539208 ARHGEF4Q9NR80 690 aa18.54■□□□□ 0.56
GNE-204ENST00000539208 STAP1Q9ULZ2 295 aa18.54■□□□□ 0.56
GNE-204ENST00000539208 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.54■□□□□ 0.56
GNE-204ENST00000539208 GOLGA8RI6L899 631 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms