RNA–Protein interactions for RNA: ENST00000539197.5

CCDC7-209, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-209ENST00000539197 YAF2Q8IY57 180 aa6.09□□□□□ -1.43
CCDC7-209ENST00000539197 TYW1Q9NV66 732 aaKnown RBP6.09□□□□□ -1.43
CCDC7-209ENST00000539197 DNAJB11Q9UBS4 358 aa6.09□□□□□ -1.43
CCDC7-209ENST00000539197 COG5Q9UP83 839 aa6.09□□□□□ -1.43
CCDC7-209ENST00000539197 LACTBL1A8MY62 500 aa6.08□□□□□ -1.44
CCDC7-209ENST00000539197 ZNF814B7Z6K7 855 aa6.08□□□□□ -1.44
CCDC7-209ENST00000539197 FAM227AF5H4B4 570 aa6.08□□□□□ -1.44
CCDC7-209ENST00000539197 FRS3O43559 492 aa6.08□□□□□ -1.44
CCDC7-209ENST00000539197 INMTO95050 263 aa6.08□□□□□ -1.44
CCDC7-209ENST00000539197 TGFB3P10600 412 aa6.08□□□□□ -1.44
CCDC7-209ENST00000539197 HOXA7P31268 230 aaPredicted RBP6.08□□□□□ -1.44
CCDC7-209ENST00000539197 COPAP53621 1224 aa6.08□□□□□ -1.44
CCDC7-209ENST00000539197 RAE1P78406 368 aaKnown RBP6.08□□□□□ -1.44
CCDC7-209ENST00000539197 CLCA4Q14CN2 919 aa6.08□□□□□ -1.44
CCDC7-209ENST00000539197 PRTGQ2VWP7 1150 aa6.08□□□□□ -1.44
CCDC7-209ENST00000539197 ZNF585BQ52M93 769 aa6.08□□□□□ -1.44
CCDC7-209ENST00000539197 UNC13DQ70J99 1090 aa6.08□□□□□ -1.44
CCDC7-209ENST00000539197 ZPBPQ9BS86 351 aa6.08□□□□□ -1.44
CCDC7-209ENST00000539197 DECR2Q9NUI1 292 aa6.08□□□□□ -1.44
CCDC7-209ENST00000539197 NOTCH4Q99466 2003 aa6.08□□□□□ -1.44
CCDC7-209ENST00000539197 RBL1P28749 1068 aa6.07□□□□□ -1.44
CCDC7-209ENST00000539197 CDC25AP30304 524 aa6.07□□□□□ -1.44
CCDC7-209ENST00000539197 IDUAP35475 653 aa6.07□□□□□ -1.44
CCDC7-209ENST00000539197 ALDH7A1P49419 539 aaKnown RBP6.07□□□□□ -1.44
CCDC7-209ENST00000539197 SLC12A2P55011 1212 aa6.07□□□□□ -1.44
CCDC7-209ENST00000539197 WDR5P61964 334 aaKnown RBP6.07□□□□□ -1.44
CCDC7-209ENST00000539197 MZT2AQ6P582 158 aa6.07□□□□□ -1.44
CCDC7-209ENST00000539197 KRT78Q8N1N4 520 aa6.07□□□□□ -1.44
CCDC7-209ENST00000539197 B4GALNT2Q8NHY0 566 aa6.07□□□□□ -1.44
CCDC7-209ENST00000539197 PIGKQ92643 395 aa6.07□□□□□ -1.44
CCDC7-209ENST00000539197 MRPL44Q9H9J2 332 aaKnown RBP6.07□□□□□ -1.44
CCDC7-209ENST00000539197 RGS17Q9UGC6 210 aaPredicted RBP6.07□□□□□ -1.44
CCDC7-209ENST00000539197 VPS4AQ9UN37 437 aa6.07□□□□□ -1.44
CCDC7-209ENST00000539197 THRAP3Q9Y2W1 955 aaKnown RBP6.07□□□□□ -1.44
CCDC7-209ENST00000539197 EME2A4GXA9 379 aaPredicted RBP6.06□□□□□ -1.44
CCDC7-209ENST00000539197 CTIFO43310 598 aaKnown RBP6.06□□□□□ -1.44
CCDC7-209ENST00000539197 NDUFB8O95169 186 aa6.06□□□□□ -1.44
CCDC7-209ENST00000539197 TMIGD3P0DMS9 266 aaPredicted RBP6.06□□□□□ -1.44
CCDC7-209ENST00000539197 TMEM225BP0DP42 221 aa6.06□□□□□ -1.44
CCDC7-209ENST00000539197 PLA2G2AP14555 144 aa6.06□□□□□ -1.44
CCDC7-209ENST00000539197 ST6GAL1P15907 406 aa6.06□□□□□ -1.44
CCDC7-209ENST00000539197 MTAPQ13126 283 aa6.06□□□□□ -1.44
CCDC7-209ENST00000539197 B4GALNT4Q76KP1 1039 aa6.06□□□□□ -1.44
CCDC7-209ENST00000539197 P3H2Q8IVL5 708 aa6.06□□□□□ -1.44
CCDC7-209ENST00000539197 ZDHHC12Q96GR4 267 aa6.06□□□□□ -1.44
CCDC7-209ENST00000539197 TUBB6Q9BUF5 446 aa6.06□□□□□ -1.44
CCDC7-209ENST00000539197 SELENOOQ9BVL4 669 aa6.06□□□□□ -1.44
CCDC7-209ENST00000539197 MSRB1Q9NZV6 116 aa6.06□□□□□ -1.44
CCDC7-209ENST00000539197 DDX20Q9UHI6 824 aaKnown RBP6.06□□□□□ -1.44
CCDC7-209ENST00000539197 HPSEQ9Y251 543 aa6.06□□□□□ -1.44
CCDC7-209ENST00000539197 PCDHB2Q9Y5E7 798 aa6.06□□□□□ -1.44
CCDC7-209ENST00000539197 HEMK1Q9Y5R4 338 aaPredicted RBP6.06□□□□□ -1.44
CCDC7-209ENST00000539197 TMEM272A0A1B0GTI8 110 aa6.05□□□□□ -1.44
CCDC7-209ENST00000539197 F8W810 466 aa6.05□□□□□ -1.44
CCDC7-209ENST00000539197 TLX3O43711 291 aaPredicted RBP6.05□□□□□ -1.44
CCDC7-209ENST00000539197 MAP4K4O95819 1239 aaPredicted RBP6.05□□□□□ -1.44
CCDC7-209ENST00000539197 RPS6KB1P23443 525 aa6.05□□□□□ -1.44
CCDC7-209ENST00000539197 RHDQ02161 417 aa6.05□□□□□ -1.44
CCDC7-209ENST00000539197 MTA1Q13330 715 aa6.05□□□□□ -1.44
CCDC7-209ENST00000539197 GAB1Q13480 694 aa6.05□□□□□ -1.44
CCDC7-209ENST00000539197 DNASE1L3Q13609 305 aa6.05□□□□□ -1.44
CCDC7-209ENST00000539197 C18orf65Q6ZTR6 163 aa6.05□□□□□ -1.44
CCDC7-209ENST00000539197 RFX8Q6ZV50 586 aa6.05□□□□□ -1.44
CCDC7-209ENST00000539197 FSTL5Q8N475 847 aaPredicted RBP6.05□□□□□ -1.44
CCDC7-209ENST00000539197 IPCEF1Q8WWN9 437 aaPredicted RBP6.05□□□□□ -1.44
CCDC7-209ENST00000539197 MSI2Q96DH6 328 aaKnown RBP6.05□□□□□ -1.44
CCDC7-209ENST00000539197 TMEM204Q9BSN7 226 aa6.05□□□□□ -1.44
CCDC7-209ENST00000539197 SLCO5A1Q9H2Y9 848 aa6.05□□□□□ -1.44
CCDC7-209ENST00000539197 TBC1D23Q9NUY8 699 aa6.05□□□□□ -1.44
CCDC7-209ENST00000539197 OGDHLQ9ULD0 1010 aa6.05□□□□□ -1.44
CCDC7-209ENST00000539197 hCG_2014768A0A024R1R8 64 aa6.04□□□□□ -1.44
CCDC7-209ENST00000539197 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.04□□□□□ -1.44
CCDC7-209ENST00000539197 ANKRD62A6NC57 917 aa6.04□□□□□ -1.44
CCDC7-209ENST00000539197 C4orf47A7E2U8 309 aa6.04□□□□□ -1.44
CCDC7-209ENST00000539197 EPN2O95208 641 aa6.04□□□□□ -1.44
CCDC7-209ENST00000539197 CARSP49589 748 aaKnown RBP6.04□□□□□ -1.44
CCDC7-209ENST00000539197 NUGGCQ68CJ6 796 aa6.04□□□□□ -1.44
CCDC7-209ENST00000539197 RBM44Q6ZP01 1051 aaKnown RBP6.04□□□□□ -1.44
CCDC7-209ENST00000539197 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.04□□□□□ -1.44
CCDC7-209ENST00000539197 SLC44A5Q8NCS7 719 aa6.04□□□□□ -1.44
CCDC7-209ENST00000539197 P2RY11Q96G91 374 aa6.04□□□□□ -1.44
CCDC7-209ENST00000539197 GATA5Q9BWX5 397 aaPredicted RBP6.04□□□□□ -1.44
CCDC7-209ENST00000539197 COL15A1P39059 1388 aa6.04□□□□□ -1.44
CCDC7-209ENST00000539197 ZC3H11AO75152 810 aaKnown RBP eCLIP6.03□□□□□ -1.44
CCDC7-209ENST00000539197 WDR47O94967 919 aa6.03□□□□□ -1.44
CCDC7-209ENST00000539197 MYF5P13349 255 aa6.03□□□□□ -1.44
CCDC7-209ENST00000539197 PBX1P40424 430 aa6.03□□□□□ -1.44
CCDC7-209ENST00000539197 ANAPC15P60006 121 aa6.03□□□□□ -1.44
CCDC7-209ENST00000539197 ZXDBP98169 803 aa6.03□□□□□ -1.44
CCDC7-209ENST00000539197 LCE1EQ5T753 118 aa6.03□□□□□ -1.44
CCDC7-209ENST00000539197 RNF220Q5VTB9 566 aa6.03□□□□□ -1.44
CCDC7-209ENST00000539197 SKAP1Q86WV1 359 aa6.03□□□□□ -1.44
CCDC7-209ENST00000539197 FAM156AQ8NDB6 213 aa6.03□□□□□ -1.44
CCDC7-209ENST00000539197 LRTOMTQ8WZ04 291 aa6.03□□□□□ -1.44
CCDC7-209ENST00000539197 ZNF479Q96JC4 524 aa6.03□□□□□ -1.44
CCDC7-209ENST00000539197 ZNF287Q9HBT7 754 aa6.03□□□□□ -1.44
CCDC7-209ENST00000539197 MOV10Q9HCE1 1003 aaKnown RBP6.03□□□□□ -1.44
CCDC7-209ENST00000539197 PAPOLBQ9NRJ5 636 aaKnown RBP6.03□□□□□ -1.44
CCDC7-209ENST00000539197 A0A0G2JK05 382 aa6.02□□□□□ -1.45
CCDC7-209ENST00000539197 F8W8V4 182 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms