RNA–Protein interactions for RNA: ENST00000538838.5

TMEM260-202, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best) BASIC

Gene TMEM260, Length 1,638 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-202ENST00000538838 NT5C3BQ969T7 300 aa24.52■■□□□ 1.52
TMEM260-202ENST00000538838 CYP2S1Q96SQ9 504 aa24.52■■□□□ 1.52
TMEM260-202ENST00000538838 CNPY3Q9BT09 278 aa24.52■■□□□ 1.52
TMEM260-202ENST00000538838 SLC46A2Q9BY10 475 aa24.52■■□□□ 1.52
TMEM260-202ENST00000538838 POMKQ9H5K3 350 aa24.52■■□□□ 1.52
TMEM260-202ENST00000538838 COX16Q9P0S2 106 aa24.52■■□□□ 1.52
TMEM260-202ENST00000538838 IP6K2Q9UHH9 426 aa24.52■■□□□ 1.52
TMEM260-202ENST00000538838 CAPN6Q9Y6Q1 641 aa24.52■■□□□ 1.52
TMEM260-202ENST00000538838 M0QYT0 321 aa24.51■■□□□ 1.51
TMEM260-202ENST00000538838 BUB1BO60566 1050 aaPredicted RBP24.51■■□□□ 1.51
TMEM260-202ENST00000538838 TRUB2O95900 331 aaKnown RBP24.51■■□□□ 1.51
TMEM260-202ENST00000538838 ATP5C1P36542 298 aaKnown RBP24.51■■□□□ 1.51
TMEM260-202ENST00000538838 CBX2Q14781 532 aaPredicted RBP24.51■■□□□ 1.51
TMEM260-202ENST00000538838 DAB2IPQ5VWQ8 1189 aa24.51■■□□□ 1.51
TMEM260-202ENST00000538838 CPNE8Q86YQ8 564 aa24.51■■□□□ 1.51
TMEM260-202ENST00000538838 FAM172AQ8WUF8 416 aa24.51■■□□□ 1.51
TMEM260-202ENST00000538838 HLA-CQ95604 372 aa24.51■■□□□ 1.51
TMEM260-202ENST00000538838 GOLPH3Q9H4A6 298 aa24.51■■□□□ 1.51
TMEM260-202ENST00000538838 DDIT4Q9NX09 232 aa24.51■■□□□ 1.51
TMEM260-202ENST00000538838 RRN3Q9NYV6 651 aa24.51■■□□□ 1.51
TMEM260-202ENST00000538838 MARCH2Q9P0N8 246 aa24.51■■□□□ 1.51
TMEM260-202ENST00000538838 DNMT3LQ9UJW3 386 aa24.51■■□□□ 1.51
TMEM260-202ENST00000538838 SPTBN5Q9NRC6 3674 aaKnown RBP24.5■■□□□ 1.51
TMEM260-202ENST00000538838 TRAV19A0A0A6YYK7 116 aa24.5■■□□□ 1.51
TMEM260-202ENST00000538838 IGLV3-25P01717 112 aa24.5■■□□□ 1.51
TMEM260-202ENST00000538838 CKMP06732 381 aa24.5■■□□□ 1.51
TMEM260-202ENST00000538838 HDCP19113 662 aa24.5■■□□□ 1.51
TMEM260-202ENST00000538838 DDX6P26196 483 aaKnown RBP eCLIP24.5■■□□□ 1.51
TMEM260-202ENST00000538838 ATXN1P54253 815 aaKnown RBP24.5■■□□□ 1.51
TMEM260-202ENST00000538838 NME3Q13232 169 aa24.5■■□□□ 1.51
TMEM260-202ENST00000538838 KLHDC10Q6PID8 442 aa24.5■■□□□ 1.51
TMEM260-202ENST00000538838 NPAS3Q8IXF0 933 aa24.5■■□□□ 1.51
TMEM260-202ENST00000538838 MAFAQ8NHW3 353 aaPredicted RBP24.5■■□□□ 1.51
TMEM260-202ENST00000538838 TASP1Q9H6P5 420 aa24.5■■□□□ 1.51
TMEM260-202ENST00000538838 GRXCR2A6NFK2 248 aa24.5■■□□□ 1.51
TMEM260-202ENST00000538838 IRAK2O43187 625 aa24.5■■□□□ 1.51
TMEM260-202ENST00000538838 MBL2P11226 248 aaPredicted RBP24.5■■□□□ 1.51
TMEM260-202ENST00000538838 BNIPLQ7Z465 357 aa24.5■■□□□ 1.51
TMEM260-202ENST00000538838 SUSD6Q92537 303 aa24.5■■□□□ 1.51
TMEM260-202ENST00000538838 ZSWIM3Q96MP5 696 aa24.5■■□□□ 1.51
TMEM260-202ENST00000538838 SERPINB11Q96P15 392 aa24.5■■□□□ 1.51
TMEM260-202ENST00000538838 USTQ9Y2C2 406 aa24.5■■□□□ 1.51
TMEM260-202ENST00000538838 GRID2IPA4D2P6 1211 aa24.49■■□□□ 1.51
TMEM260-202ENST00000538838 PROSCO94903 275 aa24.49■■□□□ 1.51
TMEM260-202ENST00000538838 DEUP1Q05D60 604 aa24.49■■□□□ 1.51
TMEM260-202ENST00000538838 PIGHQ14442 188 aaPredicted RBP24.49■■□□□ 1.51
TMEM260-202ENST00000538838 RNF10Q8N5U6 811 aaKnown RBP24.49■■□□□ 1.51
TMEM260-202ENST00000538838 NIPA2Q8N8Q9 360 aa24.49■■□□□ 1.51
TMEM260-202ENST00000538838 CENPIQ92674 756 aaPredicted RBP24.49■■□□□ 1.51
TMEM260-202ENST00000538838 FGF13Q92913 245 aa24.49■■□□□ 1.51
TMEM260-202ENST00000538838 IRX2Q9BZI1 471 aaPredicted RBP24.49■■□□□ 1.51
TMEM260-202ENST00000538838 SMG9Q9H0W8 520 aaKnown RBP24.49■■□□□ 1.51
TMEM260-202ENST00000538838 PIGVQ9NUD9 493 aa24.49■■□□□ 1.51
TMEM260-202ENST00000538838 SMPD4Q9NXE4 827 aa24.49■■□□□ 1.51
TMEM260-202ENST00000538838 SLC12A8A0AV02 714 aa24.48■■□□□ 1.51
TMEM260-202ENST00000538838 RDXP35241 583 aaKnown RBP24.48■■□□□ 1.51
TMEM260-202ENST00000538838 HDAC4P56524 1084 aa24.48■■□□□ 1.51
TMEM260-202ENST00000538838 SMAD4Q13485 552 aaKnown RBP24.48■■□□□ 1.51
TMEM260-202ENST00000538838 IFI16Q16666 785 aaKnown RBP24.48■■□□□ 1.51
TMEM260-202ENST00000538838 STRADAQ7RTN6 431 aa24.48■■□□□ 1.51
TMEM260-202ENST00000538838 DAAM2Q86T65 1068 aa24.48■■□□□ 1.51
TMEM260-202ENST00000538838 CMTM8Q8IZV2 173 aa24.48■■□□□ 1.51
TMEM260-202ENST00000538838 ARFGAP1Q8N6T3 406 aa24.48■■□□□ 1.51
TMEM260-202ENST00000538838 PGAP3Q96FM1 320 aaPredicted RBP24.48■■□□□ 1.51
TMEM260-202ENST00000538838 NECTIN4Q96NY8 510 aa24.48■■□□□ 1.51
TMEM260-202ENST00000538838 KCND1Q9NSA2 647 aa24.48■■□□□ 1.51
TMEM260-202ENST00000538838 HYOU1Q9Y4L1 999 aa24.48■■□□□ 1.51
TMEM260-202ENST00000538838 CPQQ9Y646 472 aa24.48■■□□□ 1.51
TMEM260-202ENST00000538838 MBTPS2O43462 519 aa24.47■■□□□ 1.51
TMEM260-202ENST00000538838 HMBSP08397 361 aa24.47■■□□□ 1.51
TMEM260-202ENST00000538838 DESP17661 470 aa24.47■■□□□ 1.51
TMEM260-202ENST00000538838 PFKLP17858 780 aa24.47■■□□□ 1.51
TMEM260-202ENST00000538838 AVPR1AP37288 418 aa24.47■■□□□ 1.51
TMEM260-202ENST00000538838 EIF4EBP2Q13542 120 aaPredicted RBP24.47■■□□□ 1.51
TMEM260-202ENST00000538838 C11orf63Q6NUN7 778 aa24.47■■□□□ 1.51
TMEM260-202ENST00000538838 LRRC57Q8N9N7 239 aa24.47■■□□□ 1.51
TMEM260-202ENST00000538838 ZFRQ96KR1 1074 aaKnown RBP24.47■■□□□ 1.51
TMEM260-202ENST00000538838 CALR3Q96L12 384 aaKnown RBP24.47■■□□□ 1.51
TMEM260-202ENST00000538838 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP24.47■■□□□ 1.51
TMEM260-202ENST00000538838 LCMT1Q9UIC8 334 aa24.47■■□□□ 1.51
TMEM260-202ENST00000538838 GOLGA6L9A6NEM1 432 aa24.46■■□□□ 1.51
TMEM260-202ENST00000538838 LRCH4O75427 683 aa24.46■■□□□ 1.51
TMEM260-202ENST00000538838 PALMO75781 387 aa24.46■■□□□ 1.51
TMEM260-202ENST00000538838 RNF8O76064 485 aa24.46■■□□□ 1.51
TMEM260-202ENST00000538838 ENDOD1O94919 500 aa24.46■■□□□ 1.51
TMEM260-202ENST00000538838 PRAMEF12O95522 483 aa24.46■■□□□ 1.51
TMEM260-202ENST00000538838 SLC7A9P82251 487 aa24.46■■□□□ 1.51
TMEM260-202ENST00000538838 FAM131BQ86XD5 332 aa24.46■■□□□ 1.51
TMEM260-202ENST00000538838 GADD45GIP1Q8TAE8 222 aaPredicted RBP24.46■■□□□ 1.51
TMEM260-202ENST00000538838 ZSCAN18Q8TBC5 510 aaPredicted RBP24.46■■□□□ 1.51
TMEM260-202ENST00000538838 MYADMQ96S97 322 aa24.46■■□□□ 1.51
TMEM260-202ENST00000538838 KLF16Q9BXK1 252 aaPredicted RBP24.46■■□□□ 1.51
TMEM260-202ENST00000538838 GKN1Q9NS71 199 aa24.46■■□□□ 1.51
TMEM260-202ENST00000538838 TLR6Q9Y2C9 796 aa24.46■■□□□ 1.51
TMEM260-202ENST00000538838 SOBPA7XYQ1 873 aa24.46■■□□□ 1.51
TMEM260-202ENST00000538838 IRF1P10914 325 aa24.46■■□□□ 1.51
TMEM260-202ENST00000538838 TCF4P15884 667 aa24.46■■□□□ 1.51
TMEM260-202ENST00000538838 GBP1P32455 592 aa24.46■■□□□ 1.51
TMEM260-202ENST00000538838 MAN1A1P33908 653 aa24.46■■□□□ 1.51
TMEM260-202ENST00000538838 TBX4P57082 545 aa24.46■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms