RNA–Protein interactions for RNA: ENST00000538470.2

DDB1-212, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-212ENST00000538470 TPGS1Q6ZTW0 290 aa9.08□□□□□ -0.96
DDB1-212ENST00000538470 SCD5Q86SK9 330 aa9.08□□□□□ -0.96
DDB1-212ENST00000538470 FMR1NBQ8N0W7 255 aaPredicted RBP9.08□□□□□ -0.96
DDB1-212ENST00000538470 CPXM2Q8N436 756 aa9.08□□□□□ -0.96
DDB1-212ENST00000538470 ANKRD52Q8NB46 1076 aa9.08□□□□□ -0.96
DDB1-212ENST00000538470 SLC4A11Q8NBS3 891 aa9.08□□□□□ -0.96
DDB1-212ENST00000538470 CEP76Q8TAP6 659 aa9.08□□□□□ -0.96
DDB1-212ENST00000538470 PIGKQ92643 395 aa9.08□□□□□ -0.96
DDB1-212ENST00000538470 PLD4Q96BZ4 506 aa9.08□□□□□ -0.96
DDB1-212ENST00000538470 CHAMP1Q96JM3 812 aa9.08□□□□□ -0.96
DDB1-212ENST00000538470 HEXIM2Q96MH2 286 aaKnown RBP9.08□□□□□ -0.96
DDB1-212ENST00000538470 CD248Q9HCU0 757 aa9.08□□□□□ -0.96
DDB1-212ENST00000538470 ZDHHC4Q9NPG8 344 aa9.08□□□□□ -0.96
DDB1-212ENST00000538470 OLA1Q9NTK5 396 aaKnown RBP9.08□□□□□ -0.96
DDB1-212ENST00000538470 CALCOCO1Q9P1Z2 691 aa9.08□□□□□ -0.96
DDB1-212ENST00000538470 MBD1Q9UIS9 605 aaPredicted RBP9.08□□□□□ -0.96
DDB1-212ENST00000538470 RASAL2Q9UJF2 1139 aa9.08□□□□□ -0.96
DDB1-212ENST00000538470 COQ4Q9Y3A0 265 aa9.08□□□□□ -0.96
DDB1-212ENST00000538470 NYNRINQ9P2P1 1898 aaKnown RBP9.08□□□□□ -0.96
DDB1-212ENST00000538470 PCNX2A6NKB5 2137 aa9.07□□□□□ -0.96
DDB1-212ENST00000538470 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.07□□□□□ -0.96
DDB1-212ENST00000538470 IGHV1OR15-9A0A0B4J2B8 117 aa9.07□□□□□ -0.96
DDB1-212ENST00000538470 A0A1W2PQF6 199 aa9.07□□□□□ -0.96
DDB1-212ENST00000538470 CDX4O14627 284 aaPredicted RBP9.07□□□□□ -0.96
DDB1-212ENST00000538470 XPO1O14980 1071 aaKnown RBP9.07□□□□□ -0.96
DDB1-212ENST00000538470 TRIM24O15164 1050 aa9.07□□□□□ -0.96
DDB1-212ENST00000538470 SMC2O95347 1197 aa9.07□□□□□ -0.96
DDB1-212ENST00000538470 LATS1O95835 1130 aa9.07□□□□□ -0.96
DDB1-212ENST00000538470 CYBBP04839 570 aa9.07□□□□□ -0.96
DDB1-212ENST00000538470 CISD3P0C7P0 127 aa9.07□□□□□ -0.96
DDB1-212ENST00000538470 CEACAM1P13688 526 aa9.07□□□□□ -0.96
DDB1-212ENST00000538470 NDUFV2P19404 249 aa9.07□□□□□ -0.96
DDB1-212ENST00000538470 TBXAS1P24557 533 aaPredicted RBP9.07□□□□□ -0.96
DDB1-212ENST00000538470 CORO1AP31146 461 aaKnown RBP9.07□□□□□ -0.96
DDB1-212ENST00000538470 PTGER3P43115 390 aa9.07□□□□□ -0.96
DDB1-212ENST00000538470 ZNF445P59923 1031 aa9.07□□□□□ -0.96
DDB1-212ENST00000538470 YWHAGP61981 247 aaKnown RBP eCLIP9.07□□□□□ -0.96
DDB1-212ENST00000538470 FKBP3Q00688 224 aaKnown RBP9.07□□□□□ -0.96
DDB1-212ENST00000538470 RPL6Q02878 288 aaKnown RBP9.07□□□□□ -0.96
DDB1-212ENST00000538470 ZNF252P-AS1Q0IIN9 211 aa9.07□□□□□ -0.96
DDB1-212ENST00000538470 BST2Q10589 180 aaKnown RBP9.07□□□□□ -0.96
DDB1-212ENST00000538470 PNOCQ13519 176 aa9.07□□□□□ -0.96
DDB1-212ENST00000538470 CUL2Q13617 745 aa9.07□□□□□ -0.96
DDB1-212ENST00000538470 STARD3Q14849 445 aa9.07□□□□□ -0.96
DDB1-212ENST00000538470 GOLGA7BQ2TAP0 167 aa9.07□□□□□ -0.96
DDB1-212ENST00000538470 CBWD6Q4V339 395 aa9.07□□□□□ -0.96
DDB1-212ENST00000538470 ZNF394Q53GI3 561 aa9.07□□□□□ -0.96
DDB1-212ENST00000538470 DCAF17Q5H9S7 520 aaPredicted RBP9.07□□□□□ -0.96
DDB1-212ENST00000538470 CBWD3Q5JTY5 395 aa9.07□□□□□ -0.96
DDB1-212ENST00000538470 CBWD5Q5RIA9 395 aa9.07□□□□□ -0.96
DDB1-212ENST00000538470 TCERG1LQ5VWI1 586 aa9.07□□□□□ -0.96
DDB1-212ENST00000538470 SLC23A3Q6PIS1 610 aa9.07□□□□□ -0.96
DDB1-212ENST00000538470 TOGARAM2Q6ZUX3 1019 aa9.07□□□□□ -0.96
DDB1-212ENST00000538470 ARMCX6Q7L4S7 300 aa9.07□□□□□ -0.96
DDB1-212ENST00000538470 PIGZQ86VD9 579 aa9.07□□□□□ -0.96
DDB1-212ENST00000538470 MIB1Q86YT6 1006 aa9.07□□□□□ -0.96
DDB1-212ENST00000538470 FAM217AQ8IXS0 508 aa9.07□□□□□ -0.96
DDB1-212ENST00000538470 SMYD4Q8IYR2 804 aaPredicted RBP9.07□□□□□ -0.96
DDB1-212ENST00000538470 TMEFF1Q8IYR6 380 aa9.07□□□□□ -0.96
DDB1-212ENST00000538470 SPATA20Q8TB22 786 aa9.07□□□□□ -0.96
DDB1-212ENST00000538470 IPO4Q8TEX9 1081 aaKnown RBP9.07□□□□□ -0.96
DDB1-212ENST00000538470 UCMAQ8WVF2 138 aa9.07□□□□□ -0.96
DDB1-212ENST00000538470 RLN3Q8WXF3 142 aa9.07□□□□□ -0.96
DDB1-212ENST00000538470 SEMA4DQ92854 862 aa9.07□□□□□ -0.96
DDB1-212ENST00000538470 ARID3AQ99856 593 aa9.07□□□□□ -0.96
DDB1-212ENST00000538470 HESX1Q9UBX0 185 aa9.07□□□□□ -0.96
DDB1-212ENST00000538470 HOOK1Q9UJC3 728 aaKnown RBP9.07□□□□□ -0.96
DDB1-212ENST00000538470 FBXO10Q9UK96 956 aa9.07□□□□□ -0.96
DDB1-212ENST00000538470 PILRBQ9UKJ0 227 aa9.07□□□□□ -0.96
DDB1-212ENST00000538470 HCN2Q9UL51 889 aa9.07□□□□□ -0.96
DDB1-212ENST00000538470 IGF2RP11717 2491 aa9.06□□□□□ -0.96
DDB1-212ENST00000538470 GOLGA6L4A6NEF3 574 aa9.06□□□□□ -0.96
DDB1-212ENST00000538470 UPK3BL1B0FP48 263 aa9.06□□□□□ -0.96
DDB1-212ENST00000538470 PATE3B3GLJ2 98 aa9.06□□□□□ -0.96
DDB1-212ENST00000538470 PRRT4C9JH25 899 aa9.06□□□□□ -0.96
DDB1-212ENST00000538470 UPK3BL2E5RIL1 263 aa9.06□□□□□ -0.96
DDB1-212ENST00000538470 PSMA7O14818 248 aa9.06□□□□□ -0.96
DDB1-212ENST00000538470 ZBED1O96006 694 aa9.06□□□□□ -0.96
DDB1-212ENST00000538470 SERPINF2P08697 491 aa9.06□□□□□ -0.96
DDB1-212ENST00000538470 SETSIPP0DME0 302 aa9.06□□□□□ -0.96
DDB1-212ENST00000538470 ENGP17813 658 aa9.06□□□□□ -0.96
DDB1-212ENST00000538470 PRCPP42785 496 aa9.06□□□□□ -0.96
DDB1-212ENST00000538470 MFAP3P55082 362 aa9.06□□□□□ -0.96
DDB1-212ENST00000538470 IRX4P78413 519 aa9.06□□□□□ -0.96
DDB1-212ENST00000538470 EFEMP1Q12805 493 aa9.06□□□□□ -0.96
DDB1-212ENST00000538470 STIM1Q13586 685 aa9.06□□□□□ -0.96
DDB1-212ENST00000538470 ENPP2Q13822 863 aa9.06□□□□□ -0.96
DDB1-212ENST00000538470 DUOXA1Q1HG43 343 aa9.06□□□□□ -0.96
DDB1-212ENST00000538470 SGO2Q562F6 1265 aa9.06□□□□□ -0.96
DDB1-212ENST00000538470 SH3PXD2AQ5TCZ1 1133 aa9.06□□□□□ -0.96
DDB1-212ENST00000538470 FYB2Q5VWT5 728 aa9.06□□□□□ -0.96
DDB1-212ENST00000538470 PM20D1Q6GTS8 502 aa9.06□□□□□ -0.96
DDB1-212ENST00000538470 RSRC2Q7L4I2 434 aaKnown RBP9.06□□□□□ -0.96
DDB1-212ENST00000538470 ANKS1BQ7Z6G8 1248 aa9.06□□□□□ -0.96
DDB1-212ENST00000538470 METTL3Q86U44 580 aaKnown RBP9.06□□□□□ -0.96
DDB1-212ENST00000538470 SCML4Q8N228 414 aa9.06□□□□□ -0.96
DDB1-212ENST00000538470 FOXJ1Q92949 421 aa9.06□□□□□ -0.96
DDB1-212ENST00000538470 SMARCE1Q969G3 411 aa9.06□□□□□ -0.96
DDB1-212ENST00000538470 TIGD1Q96MW7 591 aa9.06□□□□□ -0.96
DDB1-212ENST00000538470 SLC2A11Q9BYW1 496 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms