RNA–Protein interactions for RNA: ENST00000538446.5

CDK2AP1-204, Transcript of cyclin dependent kinase 2 associated protein 1, humanhuman

TSL 5 BASIC

Gene CDK2AP1, Length 1,161 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK2AP1-204ENST00000538446 FGF14Q92915 247 aa13.29□□□□□ -0.28
CDK2AP1-204ENST00000538446 ELSPBP1Q96BH3 223 aa13.29□□□□□ -0.28
CDK2AP1-204ENST00000538446 ZFRQ96KR1 1074 aaKnown RBP13.29□□□□□ -0.28
CDK2AP1-204ENST00000538446 CFAP57Q96MR6 1250 aa13.29□□□□□ -0.28
CDK2AP1-204ENST00000538446 KXD1Q9BQD3 176 aa13.29□□□□□ -0.28
CDK2AP1-204ENST00000538446 DDX23Q9BUQ8 820 aaKnown RBP13.29□□□□□ -0.28
CDK2AP1-204ENST00000538446 NUP85Q9BW27 656 aa13.29□□□□□ -0.28
CDK2AP1-204ENST00000538446 KLF16Q9BXK1 252 aaPredicted RBP13.29□□□□□ -0.28
CDK2AP1-204ENST00000538446 GKN1Q9NS71 199 aa13.29□□□□□ -0.28
CDK2AP1-204ENST00000538446 DDIT4Q9NX09 232 aa13.29□□□□□ -0.28
CDK2AP1-204ENST00000538446 CTTNBP2NLQ9P2B4 639 aa13.29□□□□□ -0.28
CDK2AP1-204ENST00000538446 CFAP97Q9P2B7 532 aa13.29□□□□□ -0.28
CDK2AP1-204ENST00000538446 IGSF9Q9P2J2 1179 aa13.29□□□□□ -0.28
CDK2AP1-204ENST00000538446 LSM7Q9UK45 103 aaKnown RBP13.29□□□□□ -0.28
CDK2AP1-204ENST00000538446 SH3BP1Q9Y3L3 701 aa13.29□□□□□ -0.28
CDK2AP1-204ENST00000538446 PCDHA13Q9Y5I0 950 aa13.29□□□□□ -0.28
CDK2AP1-204ENST00000538446 NUMBLQ9Y6R0 609 aa13.29□□□□□ -0.28
CDK2AP1-204ENST00000538446 C2CD4BA6NLJ0 364 aa13.28□□□□□ -0.28
CDK2AP1-204ENST00000538446 HEPACAM2A8MVW5 462 aa13.28□□□□□ -0.28
CDK2AP1-204ENST00000538446 M0QYT0 321 aa13.28□□□□□ -0.28
CDK2AP1-204ENST00000538446 IRAK2O43187 625 aa13.28□□□□□ -0.28
CDK2AP1-204ENST00000538446 HMBSP08397 361 aa13.28□□□□□ -0.28
CDK2AP1-204ENST00000538446 KCNA4P22459 653 aa13.28□□□□□ -0.28
CDK2AP1-204ENST00000538446 PTPN9P43378 593 aa13.28□□□□□ -0.28
CDK2AP1-204ENST00000538446 TBX4P57082 545 aa13.28□□□□□ -0.28
CDK2AP1-204ENST00000538446 RPL7AP62424 266 aaKnown RBP13.28□□□□□ -0.28
CDK2AP1-204ENST00000538446 NME3Q13232 169 aa13.28□□□□□ -0.28
CDK2AP1-204ENST00000538446 ZNF77Q15935 545 aa13.28□□□□□ -0.28
CDK2AP1-204ENST00000538446 SLC25A52Q3SY17 297 aa13.28□□□□□ -0.28
CDK2AP1-204ENST00000538446 SND1Q7KZF4 910 aaKnown RBP eCLIP13.28□□□□□ -0.28
CDK2AP1-204ENST00000538446 YAF2Q8IY57 180 aa13.28□□□□□ -0.28
CDK2AP1-204ENST00000538446 TXLNBQ8N3L3 684 aa13.28□□□□□ -0.28
CDK2AP1-204ENST00000538446 BPIFB1Q8TDL5 484 aa13.28□□□□□ -0.28
CDK2AP1-204ENST00000538446 DEPDC1BQ8WUY9 529 aa13.28□□□□□ -0.28
CDK2AP1-204ENST00000538446 RXFP2Q8WXD0 754 aa13.28□□□□□ -0.28
CDK2AP1-204ENST00000538446 PLD4Q96BZ4 506 aa13.28□□□□□ -0.28
CDK2AP1-204ENST00000538446 ARHGEF26Q96DR7 871 aa13.28□□□□□ -0.28
CDK2AP1-204ENST00000538446 NPY6RQ99463 290 aa13.28□□□□□ -0.28
CDK2AP1-204ENST00000538446 KCNK12Q9HB15 430 aa13.28□□□□□ -0.28
CDK2AP1-204ENST00000538446 TMEM51Q9NW97 253 aa13.28□□□□□ -0.28
CDK2AP1-204ENST00000538446 THG1LQ9NWX6 298 aaKnown RBP13.28□□□□□ -0.28
CDK2AP1-204ENST00000538446 TLR6Q9Y2C9 796 aa13.28□□□□□ -0.28
CDK2AP1-204ENST00000538446 C2orf16Q68DN1 1984 aa13.27□□□□□ -0.28
CDK2AP1-204ENST00000538446 SYNJ2BP-COX16A0A087WUM0 186 aa13.27□□□□□ -0.29
CDK2AP1-204ENST00000538446 E2F8A0AVK6 867 aa13.27□□□□□ -0.29
CDK2AP1-204ENST00000538446 TMEM191CA6NGB0 347 aa13.27□□□□□ -0.29
CDK2AP1-204ENST00000538446 C19orf67A6NJJ6 358 aa13.27□□□□□ -0.29
CDK2AP1-204ENST00000538446 STC2O76061 302 aa13.27□□□□□ -0.29
CDK2AP1-204ENST00000538446 F9P00740 461 aa13.27□□□□□ -0.29
CDK2AP1-204ENST00000538446 IGLV3-25P01717 112 aa13.27□□□□□ -0.29
CDK2AP1-204ENST00000538446 SLC2A3P11169 496 aa13.27□□□□□ -0.29
CDK2AP1-204ENST00000538446 PSMC3P17980 439 aa13.27□□□□□ -0.29
CDK2AP1-204ENST00000538446 HARS2P49590 506 aaKnown RBP13.27□□□□□ -0.29
CDK2AP1-204ENST00000538446 ZNF143P52747 638 aaPredicted RBP13.27□□□□□ -0.29
CDK2AP1-204ENST00000538446 PITX1P78337 314 aaPredicted RBP13.27□□□□□ -0.29
CDK2AP1-204ENST00000538446 CCZ1BP86790 482 aa13.27□□□□□ -0.29
CDK2AP1-204ENST00000538446 CCZ1P86791 482 aaPredicted RBP13.27□□□□□ -0.29
CDK2AP1-204ENST00000538446 ZXDBP98169 803 aa13.27□□□□□ -0.29
CDK2AP1-204ENST00000538446 ATP11AP98196 1134 aa13.27□□□□□ -0.29
CDK2AP1-204ENST00000538446 DEUP1Q05D60 604 aa13.27□□□□□ -0.29
CDK2AP1-204ENST00000538446 RING1Q06587 406 aa13.27□□□□□ -0.29
CDK2AP1-204ENST00000538446 CCDC14Q49A88 953 aa13.27□□□□□ -0.29
CDK2AP1-204ENST00000538446 NUGGCQ68CJ6 796 aa13.27□□□□□ -0.29
CDK2AP1-204ENST00000538446 TRNP1Q6NT89 227 aa13.27□□□□□ -0.29
CDK2AP1-204ENST00000538446 VITQ6UXI7 678 aa13.27□□□□□ -0.29
CDK2AP1-204ENST00000538446 KIAA1328Q86T90 577 aa13.27□□□□□ -0.29
CDK2AP1-204ENST00000538446 MFSD6LQ8IWD5 586 aa13.27□□□□□ -0.29
CDK2AP1-204ENST00000538446 UNC45BQ8IWX7 931 aa13.27□□□□□ -0.29
CDK2AP1-204ENST00000538446 RHOT2Q8IXI1 618 aa13.27□□□□□ -0.29
CDK2AP1-204ENST00000538446 KIAA1958Q8N8K9 716 aa13.27□□□□□ -0.29
CDK2AP1-204ENST00000538446 ACRBPQ8NEB7 543 aa13.27□□□□□ -0.29
CDK2AP1-204ENST00000538446 ZNF564Q8TBZ8 553 aaPredicted RBP13.27□□□□□ -0.29
CDK2AP1-204ENST00000538446 FNIP1Q8TF40 1166 aa13.27□□□□□ -0.29
CDK2AP1-204ENST00000538446 RSAD2Q8WXG1 361 aa13.27□□□□□ -0.29
CDK2AP1-204ENST00000538446 RFFLQ8WZ73 363 aa13.27□□□□□ -0.29
CDK2AP1-204ENST00000538446 RNF34Q969K3 372 aa13.27□□□□□ -0.29
CDK2AP1-204ENST00000538446 NT5C3BQ969T7 300 aa13.27□□□□□ -0.29
CDK2AP1-204ENST00000538446 RSPRY1Q96DX4 576 aa13.27□□□□□ -0.29
CDK2AP1-204ENST00000538446 TBCBQ99426 244 aa13.27□□□□□ -0.29
CDK2AP1-204ENST00000538446 CNPY3Q9BT09 278 aa13.27□□□□□ -0.29
CDK2AP1-204ENST00000538446 TRMT61BQ9BVS5 477 aaKnown RBP13.27□□□□□ -0.29
CDK2AP1-204ENST00000538446 DCLK3Q9C098 648 aa13.27□□□□□ -0.29
CDK2AP1-204ENST00000538446 COX16Q9P0S2 106 aa13.27□□□□□ -0.29
CDK2AP1-204ENST00000538446 UVRAGQ9P2Y5 699 aa13.27□□□□□ -0.29
CDK2AP1-204ENST00000538446 PAXBP1Q9Y5B6 917 aa13.27□□□□□ -0.29
CDK2AP1-204ENST00000538446 SLC9A3R1O14745 358 aaPredicted RBP13.26□□□□□ -0.29
CDK2AP1-204ENST00000538446 IGLV3-27P01718 113 aa13.26□□□□□ -0.29
CDK2AP1-204ENST00000538446 APOEP02649 317 aa13.26□□□□□ -0.29
CDK2AP1-204ENST00000538446 ASGR2P07307 311 aa13.26□□□□□ -0.29
CDK2AP1-204ENST00000538446 TFE3P19532 575 aaPredicted RBP13.26□□□□□ -0.29
CDK2AP1-204ENST00000538446 PSMA2P25787 234 aa13.26□□□□□ -0.29
CDK2AP1-204ENST00000538446 CORO1AP31146 461 aaKnown RBP13.26□□□□□ -0.29
CDK2AP1-204ENST00000538446 CCR1P32246 355 aa13.26□□□□□ -0.29
CDK2AP1-204ENST00000538446 RDXP35241 583 aaKnown RBP13.26□□□□□ -0.29
CDK2AP1-204ENST00000538446 VAV2P52735 878 aa13.26□□□□□ -0.29
CDK2AP1-204ENST00000538446 FCHO2Q0JRZ9 810 aa13.26□□□□□ -0.29
CDK2AP1-204ENST00000538446 GRM2Q14416 872 aa13.26□□□□□ -0.29
CDK2AP1-204ENST00000538446 CDO1Q16878 200 aa13.26□□□□□ -0.29
CDK2AP1-204ENST00000538446 HTR3DQ70Z44 454 aa13.26□□□□□ -0.29
CDK2AP1-204ENST00000538446 STRADAQ7RTN6 431 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 152.2 ms