RNA–Protein interactions for RNA: ENST00000538291.5

SCARB1-205, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 5,527 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-205ENST00000538291 CCDC81Q6ZN84 652 aa17.28■□□□□ 0.36
SCARB1-205ENST00000538291 PTAR1Q7Z6K3 402 aaPredicted RBP17.28■□□□□ 0.36
SCARB1-205ENST00000538291 SLC26A11Q86WA9 606 aa17.28■□□□□ 0.36
SCARB1-205ENST00000538291 DMAP1Q9NPF5 467 aaPredicted RBP17.28■□□□□ 0.36
SCARB1-205ENST00000538291 TSPAN16Q9UKR8 245 aa17.28■□□□□ 0.36
SCARB1-205ENST00000538291 SNCAIPQ9Y6H5 919 aa17.28■□□□□ 0.36
SCARB1-205ENST00000538291 FGFR1P11362 822 aa17.28■□□□□ 0.36
SCARB1-205ENST00000538291 TNNI3P19429 210 aa17.28■□□□□ 0.36
SCARB1-205ENST00000538291 CYP2A7P20853 494 aa17.28■□□□□ 0.36
SCARB1-205ENST00000538291 KCNA3P22001 575 aa17.28■□□□□ 0.36
SCARB1-205ENST00000538291 AKAP5P24588 427 aa17.28■□□□□ 0.36
SCARB1-205ENST00000538291 C1QBPQ07021 282 aaKnown RBP17.28■□□□□ 0.36
SCARB1-205ENST00000538291 USP39Q53GS9 565 aaKnown RBP17.28■□□□□ 0.36
SCARB1-205ENST00000538291 PPM1LQ5SGD2 360 aa17.28■□□□□ 0.36
SCARB1-205ENST00000538291 TBCBQ99426 244 aa17.28■□□□□ 0.36
SCARB1-205ENST00000538291 VANGL2Q9ULK5 521 aa17.28■□□□□ 0.36
SCARB1-205ENST00000538291 SERPINB5P36952 375 aa17.27■□□□□ 0.36
SCARB1-205ENST00000538291 TUFMP49411 452 aaKnown RBP17.27■□□□□ 0.36
SCARB1-205ENST00000538291 ALDH5A1P51649 535 aaPredicted RBP17.27■□□□□ 0.36
SCARB1-205ENST00000538291 NDST1P52848 882 aa17.27■□□□□ 0.36
SCARB1-205ENST00000538291 OVGP1Q12889 678 aa17.27■□□□□ 0.36
SCARB1-205ENST00000538291 LRRC8DQ7L1W4 858 aa17.27■□□□□ 0.36
SCARB1-205ENST00000538291 SLC47A2Q86VL8 602 aa17.27■□□□□ 0.36
SCARB1-205ENST00000538291 DNAJC9Q8WXX5 260 aa17.27■□□□□ 0.36
SCARB1-205ENST00000538291 TMEM121Q9BTD3 319 aa17.27■□□□□ 0.36
SCARB1-205ENST00000538291 FBXO10Q9UK96 956 aa17.27■□□□□ 0.36
SCARB1-205ENST00000538291 TFR2Q9UP52 801 aa17.27■□□□□ 0.36
SCARB1-205ENST00000538291 NCKAP1Q9Y2A7 1128 aa17.27■□□□□ 0.36
SCARB1-205ENST00000538291 OR1E1P30953 314 aa17.27■□□□□ 0.36
SCARB1-205ENST00000538291 PSEN2P49810 448 aa17.27■□□□□ 0.36
SCARB1-205ENST00000538291 ALFQ53S48 1182 aa17.27■□□□□ 0.36
SCARB1-205ENST00000538291 KIF2BQ8N4N8 673 aa17.27■□□□□ 0.36
SCARB1-205ENST00000538291 SEMA6BQ9H3T3 888 aa17.27■□□□□ 0.36
SCARB1-205ENST00000538291 SMPD4Q9NXE4 827 aa17.27■□□□□ 0.36
SCARB1-205ENST00000538291 GTF2A1LQ9UNN4 478 aa17.27■□□□□ 0.36
SCARB1-205ENST00000538291 TRIM17Q9Y577 477 aa17.27■□□□□ 0.36
SCARB1-205ENST00000538291 SERPINI2O75830 405 aa17.27■□□□□ 0.35
SCARB1-205ENST00000538291 BMP10O95393 424 aa17.27■□□□□ 0.35
SCARB1-205ENST00000538291 KRT6AP02538 564 aa17.27■□□□□ 0.35
SCARB1-205ENST00000538291 KRT6BP04259 564 aa17.27■□□□□ 0.35
SCARB1-205ENST00000538291 KRT6CP48668 564 aa17.27■□□□□ 0.35
SCARB1-205ENST00000538291 MGAT5Q09328 741 aa17.27■□□□□ 0.35
SCARB1-205ENST00000538291 ILF2Q12905 390 aaKnown RBP17.27■□□□□ 0.35
SCARB1-205ENST00000538291 CCNG2Q16589 344 aa17.27■□□□□ 0.35
SCARB1-205ENST00000538291 PTGISQ16647 500 aa17.27■□□□□ 0.35
SCARB1-205ENST00000538291 TTI2Q6NXR4 508 aa17.27■□□□□ 0.35
SCARB1-205ENST00000538291 TTC33Q6PID6 262 aaPredicted RBP17.27■□□□□ 0.35
SCARB1-205ENST00000538291 RD3Q7Z3Z2 195 aa17.27■□□□□ 0.35
SCARB1-205ENST00000538291 SLC22A9Q8IVM8 553 aa17.27■□□□□ 0.35
SCARB1-205ENST00000538291 KIAA2013Q8IYS2 634 aa17.27■□□□□ 0.35
SCARB1-205ENST00000538291 NLNQ9BYT8 704 aa17.27■□□□□ 0.35
SCARB1-205ENST00000538291 ELOVL4Q9GZR5 314 aa17.27■□□□□ 0.35
SCARB1-205ENST00000538291 SYBUQ9NX95 663 aa17.27■□□□□ 0.35
SCARB1-205ENST00000538291 PHTF1Q9UMS5 762 aa17.27■□□□□ 0.35
SCARB1-205ENST00000538291 TRPV2Q9Y5S1 764 aa17.27■□□□□ 0.35
SCARB1-205ENST00000538291 CLTCQ00610 1675 aaKnown RBP17.27■□□□□ 0.35
SCARB1-205ENST00000538291 AKAP3O75969 853 aa17.27■□□□□ 0.35
SCARB1-205ENST00000538291 ACAT1P24752 427 aaKnown RBP17.27■□□□□ 0.35
SCARB1-205ENST00000538291 GPC2Q8N158 579 aa17.27■□□□□ 0.35
SCARB1-205ENST00000538291 CSGALNACT1Q8TDX6 532 aa17.27■□□□□ 0.35
SCARB1-205ENST00000538291 OSCP1Q8WVF1 389 aa17.27■□□□□ 0.35
SCARB1-205ENST00000538291 CASKIN2Q8WXE0 1202 aa17.27■□□□□ 0.35
SCARB1-205ENST00000538291 CEP152O94986 1710 aa17.26■□□□□ 0.35
SCARB1-205ENST00000538291 TSPAN3O60637 253 aa17.26■□□□□ 0.35
SCARB1-205ENST00000538291 CCNG1P51959 295 aa17.26■□□□□ 0.35
SCARB1-205ENST00000538291 ADIGQ0VDE8 80 aa17.26■□□□□ 0.35
SCARB1-205ENST00000538291 CYLC2Q14093 348 aaPredicted RBP17.26■□□□□ 0.35
SCARB1-205ENST00000538291 NFIL3Q16649 462 aa17.26■□□□□ 0.35
SCARB1-205ENST00000538291 MRPL48Q96GC5 212 aaKnown RBP17.26■□□□□ 0.35
SCARB1-205ENST00000538291 PAFAH2Q99487 392 aa17.26■□□□□ 0.35
SCARB1-205ENST00000538291 PRRG3Q9BZD7 231 aa17.26■□□□□ 0.35
SCARB1-205ENST00000538291 KLHL28Q9NXS3 571 aa17.26■□□□□ 0.35
SCARB1-205ENST00000538291 CARNS1A5YM72 827 aa17.26■□□□□ 0.35
SCARB1-205ENST00000538291 YWHAZP63104 245 aaKnown RBP17.26■□□□□ 0.35
SCARB1-205ENST00000538291 PRKAA1Q13131 559 aa17.26■□□□□ 0.35
SCARB1-205ENST00000538291 CBWD3Q5JTY5 395 aa17.26■□□□□ 0.35
SCARB1-205ENST00000538291 CBWD5Q5RIA9 395 aa17.26■□□□□ 0.35
SCARB1-205ENST00000538291 P2RX7Q99572 595 aaKnown RBP17.26■□□□□ 0.35
SCARB1-205ENST00000538291 GLIS2Q9BZE0 524 aaPredicted RBP17.26■□□□□ 0.35
SCARB1-205ENST00000538291 ARMC7Q9H6L4 198 aa17.26■□□□□ 0.35
SCARB1-205ENST00000538291 INTS13Q9NVM9 706 aa17.26■□□□□ 0.35
SCARB1-205ENST00000538291 UBP1Q9NZI7 540 aa17.26■□□□□ 0.35
SCARB1-205ENST00000538291 MYO3AQ8NEV4 1616 aa17.26■□□□□ 0.35
SCARB1-205ENST00000538291 STAU1O95793 577 aaKnown RBP17.26■□□□□ 0.35
SCARB1-205ENST00000538291 IGSF6O95976 241 aa17.26■□□□□ 0.35
SCARB1-205ENST00000538291 RARGP13631 454 aa17.26■□□□□ 0.35
SCARB1-205ENST00000538291 ZNF23P17027 643 aa17.26■□□□□ 0.35
SCARB1-205ENST00000538291 SOX10P56693 466 aa17.26■□□□□ 0.35
SCARB1-205ENST00000538291 FSCN1Q16658 493 aaKnown RBP17.26■□□□□ 0.35
SCARB1-205ENST00000538291 C11orf63Q6NUN7 778 aa17.26■□□□□ 0.35
SCARB1-205ENST00000538291 LZTR1Q8N653 840 aa17.26■□□□□ 0.35
SCARB1-205ENST00000538291 AKT1S1Q96B36 256 aa17.26■□□□□ 0.35
SCARB1-205ENST00000538291 CELF6Q96J87 481 aaKnown RBP17.26■□□□□ 0.35
SCARB1-205ENST00000538291 FRMPD1Q5SYB0 1578 aa17.26■□□□□ 0.35
SCARB1-205ENST00000538291 DIP2CQ9Y2E4 1556 aa17.26■□□□□ 0.35
SCARB1-205ENST00000538291 A0A0A6YYK5 440 aaPredicted RBP17.26■□□□□ 0.35
SCARB1-205ENST00000538291 VIL1P09327 827 aaKnown RBP17.26■□□□□ 0.35
SCARB1-205ENST00000538291 ZNF7P17097 686 aaPredicted RBP17.26■□□□□ 0.35
SCARB1-205ENST00000538291 GRK2P25098 689 aa17.26■□□□□ 0.35
SCARB1-205ENST00000538291 PPP2R1BP30154 601 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms