RNA–Protein interactions for RNA: ENST00000538177.5

SLC28A1-204, Transcript of solute carrier family 28 member 1, humanhuman

TSL 2 BASIC

Gene SLC28A1, Length 2,155 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-204ENST00000538177 KCNT2Q6UVM3 1135 aa11.84□□□□□ -0.51
SLC28A1-204ENST00000538177 NDRG1Q92597 394 aaKnown RBP11.84□□□□□ -0.51
SLC28A1-204ENST00000538177 SLC2A13Q96QE2 648 aa11.84□□□□□ -0.51
SLC28A1-204ENST00000538177 NPY6RQ99463 290 aa11.84□□□□□ -0.51
SLC28A1-204ENST00000538177 CHST12Q9NRB3 414 aa11.84□□□□□ -0.51
SLC28A1-204ENST00000538177 DTLQ9NZJ0 730 aa11.84□□□□□ -0.51
SLC28A1-204ENST00000538177 ST3GAL5Q9UNP4 418 aa11.84□□□□□ -0.51
SLC28A1-204ENST00000538177 STARD13Q9Y3M8 1113 aa11.84□□□□□ -0.51
SLC28A1-204ENST00000538177 MEIS3P2A8K0S8 358 aa11.83□□□□□ -0.52
SLC28A1-204ENST00000538177 HACD1B0YJ81 288 aa11.83□□□□□ -0.52
SLC28A1-204ENST00000538177 M0QZ92 97 aa11.83□□□□□ -0.52
SLC28A1-204ENST00000538177 BEST1O76090 585 aa11.83□□□□□ -0.52
SLC28A1-204ENST00000538177 APRTP07741 180 aa11.83□□□□□ -0.52
SLC28A1-204ENST00000538177 TPSB2P20231 275 aa11.83□□□□□ -0.52
SLC28A1-204ENST00000538177 AMPD1P23109 780 aa11.83□□□□□ -0.52
SLC28A1-204ENST00000538177 ACAT1P24752 427 aaKnown RBP11.83□□□□□ -0.52
SLC28A1-204ENST00000538177 ARL4AP40617 200 aa11.83□□□□□ -0.52
SLC28A1-204ENST00000538177 SULT1E1P49888 294 aa11.83□□□□□ -0.52
SLC28A1-204ENST00000538177 YWHAGP61981 247 aaKnown RBP eCLIP11.83□□□□□ -0.52
SLC28A1-204ENST00000538177 TPSAB1Q15661 275 aa11.83□□□□□ -0.52
SLC28A1-204ENST00000538177 KBTBD12Q3ZCT8 623 aa11.83□□□□□ -0.52
SLC28A1-204ENST00000538177 GNASQ5JWF2 1037 aa11.83□□□□□ -0.52
SLC28A1-204ENST00000538177 FAM182AQ5T1J6 154 aa11.83□□□□□ -0.52
SLC28A1-204ENST00000538177 SYCP2LQ5T4T6 812 aa11.83□□□□□ -0.52
SLC28A1-204ENST00000538177 FAXCQ5TGI0 409 aa11.83□□□□□ -0.52
SLC28A1-204ENST00000538177 HHATQ5VTY9 493 aa11.83□□□□□ -0.52
SLC28A1-204ENST00000538177 RNF43Q68DV7 783 aa11.83□□□□□ -0.52
SLC28A1-204ENST00000538177 CLEC20AQ6ZU45 233 aa11.83□□□□□ -0.52
SLC28A1-204ENST00000538177 BZW1Q7L1Q6 419 aaKnown RBP11.83□□□□□ -0.52
SLC28A1-204ENST00000538177 FAM131BQ86XD5 332 aa11.83□□□□□ -0.52
SLC28A1-204ENST00000538177 VPS52Q8N1B4 723 aa11.83□□□□□ -0.52
SLC28A1-204ENST00000538177 BANPQ8N9N5 519 aa11.83□□□□□ -0.52
SLC28A1-204ENST00000538177 FAM149B1Q96BN6 582 aa11.83□□□□□ -0.52
SLC28A1-204ENST00000538177 SENP8Q96LD8 212 aa11.83□□□□□ -0.52
SLC28A1-204ENST00000538177 OLFM3Q96PB7 478 aa11.83□□□□□ -0.52
SLC28A1-204ENST00000538177 POPDC2Q9HBU9 364 aa11.83□□□□□ -0.52
SLC28A1-204ENST00000538177 LRRC4Q9HBW1 653 aa11.83□□□□□ -0.52
SLC28A1-204ENST00000538177 ZFYVE28Q9HCC9 887 aa11.83□□□□□ -0.52
SLC28A1-204ENST00000538177 FAM105AQ9NUU6 356 aa11.83□□□□□ -0.52
SLC28A1-204ENST00000538177 HAUS2Q9NVX0 235 aa11.83□□□□□ -0.52
SLC28A1-204ENST00000538177 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.83□□□□□ -0.52
SLC28A1-204ENST00000538177 IQANK1A0A1B0GTG1 560 aa11.82□□□□□ -0.52
SLC28A1-204ENST00000538177 TRDMT1O14717 391 aaKnown RBP11.82□□□□□ -0.52
SLC28A1-204ENST00000538177 TM9SF1O15321 606 aa11.82□□□□□ -0.52
SLC28A1-204ENST00000538177 METTL18O95568 372 aa11.82□□□□□ -0.52
SLC28A1-204ENST00000538177 GSTA2P09210 222 aa11.82□□□□□ -0.52
SLC28A1-204ENST00000538177 RARBP10826 455 aa11.82□□□□□ -0.52
SLC28A1-204ENST00000538177 GOT1P17174 413 aa11.82□□□□□ -0.52
SLC28A1-204ENST00000538177 GBP2P32456 591 aaPredicted RBP11.82□□□□□ -0.52
SLC28A1-204ENST00000538177 NDUFV1P49821 464 aa11.82□□□□□ -0.52
SLC28A1-204ENST00000538177 NBPF20Q3BBV1 942 aa11.82□□□□□ -0.52
SLC28A1-204ENST00000538177 DCAF6Q58WW2 860 aa11.82□□□□□ -0.52
SLC28A1-204ENST00000538177 MDH1BQ5I0G3 518 aa11.82□□□□□ -0.52
SLC28A1-204ENST00000538177 RSPH3Q86UC2 560 aa11.82□□□□□ -0.52
SLC28A1-204ENST00000538177 HACE1Q8IYU2 909 aa11.82□□□□□ -0.52
SLC28A1-204ENST00000538177 PYROXD2Q8N2H3 581 aa11.82□□□□□ -0.52
SLC28A1-204ENST00000538177 TMEM86AQ8N2M4 240 aa11.82□□□□□ -0.52
SLC28A1-204ENST00000538177 GBP7Q8N8V2 638 aaPredicted RBP11.82□□□□□ -0.52
SLC28A1-204ENST00000538177 LRRN4Q8WUT4 740 aa11.82□□□□□ -0.52
SLC28A1-204ENST00000538177 PLAC1Q9HBJ0 212 aa11.82□□□□□ -0.52
SLC28A1-204ENST00000538177 SLC40A1Q9NP59 571 aa11.82□□□□□ -0.52
SLC28A1-204ENST00000538177 CRTAC1Q9NQ79 661 aa11.82□□□□□ -0.52
SLC28A1-204ENST00000538177 TTLL3Q9Y4R7 772 aa11.82□□□□□ -0.52
SLC28A1-204ENST00000538177 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.82□□□□□ -0.52
SLC28A1-204ENST00000538177 SCN10AQ9Y5Y9 1956 aa11.82□□□□□ -0.52
SLC28A1-204ENST00000538177 FAM155BO75949 473 aa11.82□□□□□ -0.52
SLC28A1-204ENST00000538177 MT-ND3P03897 115 aa11.82□□□□□ -0.52
SLC28A1-204ENST00000538177 THP07101 528 aa11.82□□□□□ -0.52
SLC28A1-204ENST00000538177 INHBAP08476 426 aa11.82□□□□□ -0.52
SLC28A1-204ENST00000538177 FAM200BP0CF97 657 aa11.82□□□□□ -0.52
SLC28A1-204ENST00000538177 PRKCHP24723 683 aa11.82□□□□□ -0.52
SLC28A1-204ENST00000538177 CTGFP29279 349 aa11.82□□□□□ -0.52
SLC28A1-204ENST00000538177 HNRNPH1P31943 449 aaKnown RBP11.82□□□□□ -0.52
SLC28A1-204ENST00000538177 MLH1P40692 756 aa11.82□□□□□ -0.52
SLC28A1-204ENST00000538177 LHX1P48742 406 aa11.82□□□□□ -0.52
SLC28A1-204ENST00000538177 PITX1P78337 314 aaPredicted RBP11.82□□□□□ -0.52
SLC28A1-204ENST00000538177 SLC18A2Q05940 514 aa11.82□□□□□ -0.52
SLC28A1-204ENST00000538177 SEMA5AQ13591 1074 aa11.82□□□□□ -0.52
SLC28A1-204ENST00000538177 GDF6Q6KF10 455 aaPredicted RBP11.82□□□□□ -0.52
SLC28A1-204ENST00000538177 LVRNQ6Q4G3 990 aa11.82□□□□□ -0.52
SLC28A1-204ENST00000538177 FAM47EQ6ZV65 393 aa11.82□□□□□ -0.52
SLC28A1-204ENST00000538177 SH2D5Q6ZV89 423 aa11.82□□□□□ -0.52
SLC28A1-204ENST00000538177 RPAINQ86UA6 219 aa11.82□□□□□ -0.52
SLC28A1-204ENST00000538177 GAD1Q99259 594 aa11.82□□□□□ -0.52
SLC28A1-204ENST00000538177 SENP6Q9GZR1 1112 aaPredicted RBP11.82□□□□□ -0.52
SLC28A1-204ENST00000538177 UPF3AQ9H1J1 476 aaKnown RBP11.82□□□□□ -0.52
SLC28A1-204ENST00000538177 ARHGEF4Q9NR80 690 aa11.82□□□□□ -0.52
SLC28A1-204ENST00000538177 DDX43Q9NXZ2 648 aaKnown RBP11.82□□□□□ -0.52
SLC28A1-204ENST00000538177 KLHL14Q9P2G3 628 aa11.82□□□□□ -0.52
SLC28A1-204ENST00000538177 ZC3H7BQ9UGR2 993 aaKnown RBP11.82□□□□□ -0.52
SLC28A1-204ENST00000538177 STAP1Q9ULZ2 295 aa11.82□□□□□ -0.52
SLC28A1-204ENST00000538177 IKBKGQ9Y6K9 419 aa11.82□□□□□ -0.52
SLC28A1-204ENST00000538177 EDF1O60869 148 aaKnown RBP11.81□□□□□ -0.52
SLC28A1-204ENST00000538177 UBOX5O94941 541 aa11.81□□□□□ -0.52
SLC28A1-204ENST00000538177 FBXO21O94952 628 aa11.81□□□□□ -0.52
SLC28A1-204ENST00000538177 CHRNA1P02708 482 aa11.81□□□□□ -0.52
SLC28A1-204ENST00000538177 CYBAP13498 195 aa11.81□□□□□ -0.52
SLC28A1-204ENST00000538177 FAAP100Q0VG06 881 aa11.81□□□□□ -0.52
SLC28A1-204ENST00000538177 DNAJC3Q13217 504 aa11.81□□□□□ -0.52
SLC28A1-204ENST00000538177 PTK7Q13308 1070 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms