RNA–Protein interactions for RNA: ENST00000538136.1

MSH6-209, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 4,055 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-209ENST00000538136 MS4A14Q96JA4 679 aa7.52□□□□□ -1.21
MSH6-209ENST00000538136 TBCBQ99426 244 aa7.52□□□□□ -1.21
MSH6-209ENST00000538136 LACRTQ9GZZ8 138 aa7.52□□□□□ -1.21
MSH6-209ENST00000538136 CYP3A43Q9HB55 503 aa7.52□□□□□ -1.21
MSH6-209ENST00000538136 PARVAQ9NVD7 372 aa7.52□□□□□ -1.21
MSH6-209ENST00000538136 MARCH5Q9NX47 278 aa7.52□□□□□ -1.21
MSH6-209ENST00000538136 IPO11Q9UI26 975 aaKnown RBP7.52□□□□□ -1.21
MSH6-209ENST00000538136 MUTYHQ9UIF7 546 aa7.52□□□□□ -1.21
MSH6-209ENST00000538136 RAD54BQ9Y620 910 aa7.52□□□□□ -1.21
MSH6-209ENST00000538136 DOCK2Q92608 1830 aa7.52□□□□□ -1.21
MSH6-209ENST00000538136 HEPACAM2A8MVW5 462 aa7.52□□□□□ -1.21
MSH6-209ENST00000538136 O00370 1275 aa7.52□□□□□ -1.21
MSH6-209ENST00000538136 CILPO75339 1184 aa7.52□□□□□ -1.21
MSH6-209ENST00000538136 CEBPBP17676 345 aa7.52□□□□□ -1.21
MSH6-209ENST00000538136 TSSK4Q6SA08 328 aa7.52□□□□□ -1.21
MSH6-209ENST00000538136 CLEC20AQ6ZU45 233 aa7.52□□□□□ -1.21
MSH6-209ENST00000538136 ENOSF1Q7L5Y1 443 aa7.52□□□□□ -1.21
MSH6-209ENST00000538136 ADAMTS19Q8TE59 1207 aa7.52□□□□□ -1.21
MSH6-209ENST00000538136 EPAS1Q99814 870 aa7.52□□□□□ -1.21
MSH6-209ENST00000538136 SMOQ99835 787 aa7.52□□□□□ -1.21
MSH6-209ENST00000538136 ACBD6Q9BR61 282 aa7.52□□□□□ -1.21
MSH6-209ENST00000538136 NUCKS1Q9H1E3 243 aaKnown RBP7.52□□□□□ -1.21
MSH6-209ENST00000538136 TDP1Q9NUW8 608 aa7.52□□□□□ -1.21
MSH6-209ENST00000538136 THEGQ9P2T0 379 aa7.52□□□□□ -1.21
MSH6-209ENST00000538136 DNMT3LQ9UJW3 386 aa7.52□□□□□ -1.21
MSH6-209ENST00000538136 RGPD3A6NKT7 1758 aaPredicted RBP7.52□□□□□ -1.21
MSH6-209ENST00000538136 RGPD4Q7Z3J3 1758 aa7.52□□□□□ -1.21
MSH6-209ENST00000538136 E2F8A0AVK6 867 aa7.52□□□□□ -1.21
MSH6-209ENST00000538136 CST8O60676 142 aa7.52□□□□□ -1.21
MSH6-209ENST00000538136 CAND2O75155 1236 aa7.52□□□□□ -1.21
MSH6-209ENST00000538136 JCHAINP01591 159 aa7.52□□□□□ -1.21
MSH6-209ENST00000538136 FGGP02679 453 aa7.52□□□□□ -1.21
MSH6-209ENST00000538136 COMTP21964 271 aa7.52□□□□□ -1.21
MSH6-209ENST00000538136 CCR1P32246 355 aa7.52□□□□□ -1.21
MSH6-209ENST00000538136 ADCY8P40145 1251 aa7.52□□□□□ -1.21
MSH6-209ENST00000538136 OTOP3Q7RTS5 596 aa7.52□□□□□ -1.21
MSH6-209ENST00000538136 GOLGA6L1Q8N7Z2 621 aa7.52□□□□□ -1.21
MSH6-209ENST00000538136 DUSP16Q9BY84 665 aa7.52□□□□□ -1.21
MSH6-209ENST00000538136 TTYH1Q9H313 450 aaPredicted RBP7.52□□□□□ -1.21
MSH6-209ENST00000538136 IRAK4Q9NWZ3 460 aa7.52□□□□□ -1.21
MSH6-209ENST00000538136 SLC25A13Q9UJS0 675 aa7.52□□□□□ -1.21
MSH6-209ENST00000538136 CCL26Q9Y258 94 aa7.52□□□□□ -1.21
MSH6-209ENST00000538136 ZSWIM8A7E2V4 1837 aa7.51□□□□□ -1.21
MSH6-209ENST00000538136 SYN3O14994 580 aa7.51□□□□□ -1.21
MSH6-209ENST00000538136 SLC31A1O15431 190 aa7.51□□□□□ -1.21
MSH6-209ENST00000538136 PPP1R37O75864 691 aa7.51□□□□□ -1.21
MSH6-209ENST00000538136 ERBB2P04626 1255 aa7.51□□□□□ -1.21
MSH6-209ENST00000538136 MAN1A1P33908 653 aa7.51□□□□□ -1.21
MSH6-209ENST00000538136 SLC7A5Q01650 507 aa7.51□□□□□ -1.21
MSH6-209ENST00000538136 GPR17Q13304 367 aa7.51□□□□□ -1.21
MSH6-209ENST00000538136 BRD3Q15059 726 aa7.51□□□□□ -1.21
MSH6-209ENST00000538136 RAB6CQ53S08 254 aa7.51□□□□□ -1.21
MSH6-209ENST00000538136 ALS2CLQ60I27 953 aa7.51□□□□□ -1.21
MSH6-209ENST00000538136 DOK6Q6PKX4 331 aa7.51□□□□□ -1.21
MSH6-209ENST00000538136 PRUNE1Q86TP1 453 aa7.51□□□□□ -1.21
MSH6-209ENST00000538136 KCTD17Q8N5Z5 321 aa7.51□□□□□ -1.21
MSH6-209ENST00000538136 OR7D4Q8NG98 312 aa7.51□□□□□ -1.21
MSH6-209ENST00000538136 SUSD6Q92537 303 aa7.51□□□□□ -1.21
MSH6-209ENST00000538136 PBXIP1Q96AQ6 731 aa7.51□□□□□ -1.21
MSH6-209ENST00000538136 FOXQ1Q9C009 403 aa7.51□□□□□ -1.21
MSH6-209ENST00000538136 RAB6CQ9H0N0 254 aa7.51□□□□□ -1.21
MSH6-209ENST00000538136 SMOC2Q9H3U7 446 aa7.51□□□□□ -1.21
MSH6-209ENST00000538136 POMKQ9H5K3 350 aa7.51□□□□□ -1.21
MSH6-209ENST00000538136 NMUR1Q9HB89 426 aa7.51□□□□□ -1.21
MSH6-209ENST00000538136 DOLKQ9UPQ8 538 aa7.51□□□□□ -1.21
MSH6-209ENST00000538136 FAM169AQ9Y6X4 670 aa7.51□□□□□ -1.21
MSH6-209ENST00000538136 DOCK6Q96HP0 2047 aa7.51□□□□□ -1.21
MSH6-209ENST00000538136 ZNF185O15231 689 aa7.51□□□□□ -1.21
MSH6-209ENST00000538136 ASPAP45381 313 aa7.51□□□□□ -1.21
MSH6-209ENST00000538136 SESN2P58004 480 aaPredicted RBP7.51□□□□□ -1.21
MSH6-209ENST00000538136 STARD3Q14849 445 aa7.51□□□□□ -1.21
MSH6-209ENST00000538136 PCBP1Q15365 356 aaKnown RBP eCLIP7.51□□□□□ -1.21
MSH6-209ENST00000538136 TPRG1Q6ZUI0 275 aa7.51□□□□□ -1.21
MSH6-209ENST00000538136 GJD3Q8N144 294 aa7.51□□□□□ -1.21
MSH6-209ENST00000538136 TOP6BLQ8N6T0 577 aa7.51□□□□□ -1.21
MSH6-209ENST00000538136 IPMKQ8NFU5 416 aa7.51□□□□□ -1.21
MSH6-209ENST00000538136 OR6P1Q8NGX9 317 aa7.51□□□□□ -1.21
MSH6-209ENST00000538136 NAT14Q8WUY8 206 aa7.51□□□□□ -1.21
MSH6-209ENST00000538136 UBXN4Q92575 508 aa7.51□□□□□ -1.21
MSH6-209ENST00000538136 MRPL38Q96DV4 380 aaKnown RBP7.51□□□□□ -1.21
MSH6-209ENST00000538136 FCRL2Q96LA5 508 aaPredicted RBP7.51□□□□□ -1.21
MSH6-209ENST00000538136 PCDHB18PQ96TA0 734 aa7.51□□□□□ -1.21
MSH6-209ENST00000538136 AASDHPPTQ9NRN7 309 aa7.51□□□□□ -1.21
MSH6-209ENST00000538136 ABCB8Q9NUT2 735 aa7.51□□□□□ -1.21
MSH6-209ENST00000538136 OR12D3Q9UGF7 316 aa7.51□□□□□ -1.21
MSH6-209ENST00000538136 TRIM66O15016 1216 aa7.51□□□□□ -1.21
MSH6-209ENST00000538136 DDX3YO15523 660 aaKnown RBP7.51□□□□□ -1.21
MSH6-209ENST00000538136 SART1O43290 800 aaKnown RBP7.51□□□□□ -1.21
MSH6-209ENST00000538136 CFIP05156 583 aa7.51□□□□□ -1.21
MSH6-209ENST00000538136 KCNE1P15382 129 aa7.51□□□□□ -1.21
MSH6-209ENST00000538136 TFE3P19532 575 aaPredicted RBP7.51□□□□□ -1.21
MSH6-209ENST00000538136 GKP32189 559 aa7.51□□□□□ -1.21
MSH6-209ENST00000538136 TANGO2Q6ICL3 276 aa7.51□□□□□ -1.21
MSH6-209ENST00000538136 P3H4Q92791 437 aa7.51□□□□□ -1.21
MSH6-209ENST00000538136 CARD6Q9BX69 1037 aa7.51□□□□□ -1.21
MSH6-209ENST00000538136 OSBPL2Q9H1P3 480 aa7.51□□□□□ -1.21
MSH6-209ENST00000538136 PTPRHQ9HD43 1115 aa7.51□□□□□ -1.21
MSH6-209ENST00000538136 NT5MQ9NPB1 228 aa7.51□□□□□ -1.21
MSH6-209ENST00000538136 BZW2Q9Y6E2 419 aaKnown RBP7.51□□□□□ -1.21
MSH6-209ENST00000538136 DOCK1Q14185 1865 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 135 ms