RNA–Protein interactions for RNA: ENST00000537824.2

CSMD1-215, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 13,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-215ENST00000537824 C11orf63Q6NUN7 778 aa5.82□□□□□ -1.48
CSMD1-215ENST00000537824 STRBPQ96SI9 672 aaKnown RBP5.82□□□□□ -1.48
CSMD1-215ENST00000537824 POLR3FQ9H1D9 316 aaPredicted RBP5.82□□□□□ -1.48
CSMD1-215ENST00000537824 TM9SF1O15321 606 aa5.82□□□□□ -1.48
CSMD1-215ENST00000537824 KDM4BO94953 1096 aa5.82□□□□□ -1.48
CSMD1-215ENST00000537824 TGFBR2P37173 567 aa5.82□□□□□ -1.48
CSMD1-215ENST00000537824 MTERF2Q49AM1 385 aa5.82□□□□□ -1.48
CSMD1-215ENST00000537824 PKN3Q6P5Z2 889 aa5.82□□□□□ -1.48
CSMD1-215ENST00000537824 OR8H3Q8N146 312 aa5.82□□□□□ -1.48
CSMD1-215ENST00000537824 LRRC71Q8N4P6 559 aa5.82□□□□□ -1.48
CSMD1-215ENST00000537824 SCAIQ8N9R8 606 aa5.82□□□□□ -1.48
CSMD1-215ENST00000537824 ACTRT1Q8TDG2 376 aa5.82□□□□□ -1.48
CSMD1-215ENST00000537824 KAT2BQ92831 832 aa5.82□□□□□ -1.48
CSMD1-215ENST00000537824 CUEDC1Q9NWM3 386 aaPredicted RBP5.82□□□□□ -1.48
CSMD1-215ENST00000537824 K7ERI5 159 aa5.82□□□□□ -1.48
CSMD1-215ENST00000537824 CAMTA2O94983 1202 aa5.82□□□□□ -1.48
CSMD1-215ENST00000537824 CD44P16070 742 aaKnown RBP5.82□□□□□ -1.48
CSMD1-215ENST00000537824 PTENP60484 403 aa5.82□□□□□ -1.48
CSMD1-215ENST00000537824 POU4F1Q01851 419 aa5.82□□□□□ -1.48
CSMD1-215ENST00000537824 EIF2B5Q13144 721 aaKnown RBP5.82□□□□□ -1.48
CSMD1-215ENST00000537824 NDUFAF6Q330K2 333 aa5.82□□□□□ -1.48
CSMD1-215ENST00000537824 KLHDC7AQ5VTJ3 777 aa5.82□□□□□ -1.48
CSMD1-215ENST00000537824 VN1R5Q7Z5H4 357 aa5.82□□□□□ -1.48
CSMD1-215ENST00000537824 AMIGO2Q86SJ2 522 aa5.82□□□□□ -1.48
CSMD1-215ENST00000537824 LSM14AQ8ND56 463 aaKnown RBP5.82□□□□□ -1.48
CSMD1-215ENST00000537824 KRT35Q92764 455 aa5.82□□□□□ -1.48
CSMD1-215ENST00000537824 APOPT1Q96IL0 206 aa5.82□□□□□ -1.48
CSMD1-215ENST00000537824 PPP1R16BQ96T49 567 aa5.82□□□□□ -1.48
CSMD1-215ENST00000537824 PTTG2Q9NZH5 202 aa5.82□□□□□ -1.48
CSMD1-215ENST00000537824 WDR35Q9P2L0 1181 aa5.82□□□□□ -1.48
CSMD1-215ENST00000537824 CRNNQ9UBG3 495 aaPredicted RBP5.82□□□□□ -1.48
CSMD1-215ENST00000537824 NDUFS3O75489 264 aa5.82□□□□□ -1.48
CSMD1-215ENST00000537824 TSPAN19P0C672 248 aa5.82□□□□□ -1.48
CSMD1-215ENST00000537824 TMEM253P0C7T8 217 aa5.82□□□□□ -1.48
CSMD1-215ENST00000537824 NCOA4Q13772 614 aa5.82□□□□□ -1.48
CSMD1-215ENST00000537824 SLFN12LQ6IEE8 588 aa5.82□□□□□ -1.48
CSMD1-215ENST00000537824 CCSAPQ6IQ19 270 aaPredicted RBP5.82□□□□□ -1.48
CSMD1-215ENST00000537824 EFL1Q7Z2Z2 1120 aaKnown RBP5.82□□□□□ -1.48
CSMD1-215ENST00000537824 FAM228AQ86W67 206 aa5.82□□□□□ -1.48
CSMD1-215ENST00000537824 TTC30AQ86WT1 665 aa5.82□□□□□ -1.48
CSMD1-215ENST00000537824 CD302Q8IX05 232 aa5.82□□□□□ -1.48
CSMD1-215ENST00000537824 EID3Q8N140 333 aa5.82□□□□□ -1.48
CSMD1-215ENST00000537824 OR8H1Q8NGG4 311 aa5.82□□□□□ -1.48
CSMD1-215ENST00000537824 HDAC2Q92769 488 aaKnown RBP5.82□□□□□ -1.48
CSMD1-215ENST00000537824 RHOBTB2Q9BYZ6 727 aa5.82□□□□□ -1.48
CSMD1-215ENST00000537824 RNF38Q9H0F5 515 aa5.82□□□□□ -1.48
CSMD1-215ENST00000537824 ALDH8A1Q9H2A2 487 aaPredicted RBP5.82□□□□□ -1.48
CSMD1-215ENST00000537824 RIC8BQ9NVN3 520 aa5.82□□□□□ -1.48
CSMD1-215ENST00000537824 UGT1A9O60656 530 aa5.82□□□□□ -1.48
CSMD1-215ENST00000537824 ZMPSTE24O75844 475 aa5.82□□□□□ -1.48
CSMD1-215ENST00000537824 UGT1A6P19224 532 aa5.82□□□□□ -1.48
CSMD1-215ENST00000537824 UGT1A1P22309 533 aa5.82□□□□□ -1.48
CSMD1-215ENST00000537824 UGT1A4P22310 534 aa5.82□□□□□ -1.48
CSMD1-215ENST00000537824 UGT1A3P35503 534 aa5.82□□□□□ -1.48
CSMD1-215ENST00000537824 UGT1A5P35504 534 aa5.82□□□□□ -1.48
CSMD1-215ENST00000537824 ABL2P42684 1182 aa5.82□□□□□ -1.48
CSMD1-215ENST00000537824 RPL21P46778 160 aaKnown RBP5.82□□□□□ -1.48
CSMD1-215ENST00000537824 NME3Q13232 169 aa5.82□□□□□ -1.48
CSMD1-215ENST00000537824 QPCTQ16769 361 aa5.82□□□□□ -1.48
CSMD1-215ENST00000537824 DENND5AQ6IQ26 1287 aa5.82□□□□□ -1.48
CSMD1-215ENST00000537824 TCP10LQ8TDR4 215 aa5.82□□□□□ -1.48
CSMD1-215ENST00000537824 ZC3H10Q96K80 434 aaKnown RBP5.82□□□□□ -1.48
CSMD1-215ENST00000537824 UGT1A7Q9HAW7 530 aa5.82□□□□□ -1.48
CSMD1-215ENST00000537824 UGT1A10Q9HAW8 530 aa5.82□□□□□ -1.48
CSMD1-215ENST00000537824 UGT1A8Q9HAW9 530 aa5.82□□□□□ -1.48
CSMD1-215ENST00000537824 CHMP1AQ9HD42 196 aaPredicted RBP5.82□□□□□ -1.48
CSMD1-215ENST00000537824 ATPIF1Q9UII2 106 aa5.82□□□□□ -1.48
CSMD1-215ENST00000537824 DENND3A2RUS2 1198 aa5.82□□□□□ -1.48
CSMD1-215ENST00000537824 H3BNX3 289 aa5.82□□□□□ -1.48
CSMD1-215ENST00000537824 ABCB1P08183 1280 aaPredicted RBP5.82□□□□□ -1.48
CSMD1-215ENST00000537824 PRKAR1AP10644 381 aa5.82□□□□□ -1.48
CSMD1-215ENST00000537824 NMT1P30419 496 aaKnown RBP5.82□□□□□ -1.48
CSMD1-215ENST00000537824 SEPHS1P49903 392 aa5.82□□□□□ -1.48
CSMD1-215ENST00000537824 FASTKQ14296 549 aaKnown RBP5.82□□□□□ -1.48
CSMD1-215ENST00000537824 OTOAQ7RTW8 1153 aa5.82□□□□□ -1.48
CSMD1-215ENST00000537824 STAU2Q9NUL3 570 aaKnown RBP eCLIP5.82□□□□□ -1.48
CSMD1-215ENST00000537824 LIMD1Q9UGP4 676 aa5.82□□□□□ -1.48
CSMD1-215ENST00000537824 SQORQ9Y6N5 450 aa5.82□□□□□ -1.48
CSMD1-215ENST00000537824 C3orf70A6NLC5 250 aaPredicted RBP5.82□□□□□ -1.48
CSMD1-215ENST00000537824 GNB5O14775 395 aa5.82□□□□□ -1.48
CSMD1-215ENST00000537824 CST8O60676 142 aa5.82□□□□□ -1.48
CSMD1-215ENST00000537824 RPA3P35244 121 aaPredicted RBP5.82□□□□□ -1.48
CSMD1-215ENST00000537824 PRIM2P49643 509 aa5.82□□□□□ -1.48
CSMD1-215ENST00000537824 PCSK7Q16549 785 aa5.82□□□□□ -1.48
CSMD1-215ENST00000537824 PGS1Q32NB8 556 aa5.82□□□□□ -1.48
CSMD1-215ENST00000537824 ALFQ53S48 1182 aa5.82□□□□□ -1.48
CSMD1-215ENST00000537824 STRA8Q7Z7C7 330 aa5.82□□□□□ -1.48
CSMD1-215ENST00000537824 ERO1BQ86YB8 467 aa5.82□□□□□ -1.48
CSMD1-215ENST00000537824 BHMTQ93088 406 aa5.82□□□□□ -1.48
CSMD1-215ENST00000537824 INTS10Q9NVR2 710 aaKnown RBP5.82□□□□□ -1.48
CSMD1-215ENST00000537824 GTF2A1LQ9UNN4 478 aa5.82□□□□□ -1.48
CSMD1-215ENST00000537824 SH3BP1Q9Y3L3 701 aa5.82□□□□□ -1.48
CSMD1-215ENST00000537824 CDK12Q9NYV4 1490 aaPredicted RBP5.81□□□□□ -1.48
CSMD1-215ENST00000537824 ERCC2P18074 760 aa5.81□□□□□ -1.48
CSMD1-215ENST00000537824 VCLP18206 1134 aa5.81□□□□□ -1.48
CSMD1-215ENST00000537824 PTPN7P35236 360 aa5.81□□□□□ -1.48
CSMD1-215ENST00000537824 GRSF1Q12849 480 aaKnown RBP eCLIP5.81□□□□□ -1.48
CSMD1-215ENST00000537824 TIMM50Q3ZCQ8 353 aa5.81□□□□□ -1.48
CSMD1-215ENST00000537824 SPOUT1Q5T280 376 aaKnown RBP5.81□□□□□ -1.48
CSMD1-215ENST00000537824 ZNF333Q96JL9 665 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms