RNA–Protein interactions for RNA: ENST00000537556.1

SRGAP1-202, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 2,976 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-202ENST00000537556 HOXC11O43248 304 aaPredicted RBP8.79□□□□□ -1
SRGAP1-202ENST00000537556 MAN1A2O60476 641 aa8.79□□□□□ -1
SRGAP1-202ENST00000537556 SNX2O60749 519 aa8.79□□□□□ -1
SRGAP1-202ENST00000537556 ZNF182P17025 639 aaPredicted RBP8.79□□□□□ -1
SRGAP1-202ENST00000537556 TGM1P22735 817 aa8.79□□□□□ -1
SRGAP1-202ENST00000537556 PKLRP30613 574 aa8.79□□□□□ -1
SRGAP1-202ENST00000537556 BMPR1AP36894 532 aa8.79□□□□□ -1
SRGAP1-202ENST00000537556 CDH15P55291 814 aa8.79□□□□□ -1
SRGAP1-202ENST00000537556 NLRP6P59044 892 aa8.79□□□□□ -1
SRGAP1-202ENST00000537556 EIF3EP60228 445 aaKnown RBP8.79□□□□□ -1
SRGAP1-202ENST00000537556 GRSF1Q12849 480 aaKnown RBP eCLIP8.79□□□□□ -1
SRGAP1-202ENST00000537556 FLOT2Q14254 428 aa8.79□□□□□ -1
SRGAP1-202ENST00000537556 MAPRE1Q15691 268 aaKnown RBP8.79□□□□□ -1
SRGAP1-202ENST00000537556 HSF5Q4G112 596 aaPredicted RBP8.79□□□□□ -1
SRGAP1-202ENST00000537556 FSCBQ5H9T9 825 aa8.79□□□□□ -1
SRGAP1-202ENST00000537556 GSTA5Q7RTV2 222 aa8.79□□□□□ -1
SRGAP1-202ENST00000537556 FIBCD1Q8N539 461 aa8.79□□□□□ -1
SRGAP1-202ENST00000537556 ETNPPLQ8TBG4 499 aa8.79□□□□□ -1
SRGAP1-202ENST00000537556 GRIN3AQ8TCU5 1115 aa8.79□□□□□ -1
SRGAP1-202ENST00000537556 S100ZQ8WXG8 99 aa8.79□□□□□ -1
SRGAP1-202ENST00000537556 ATG4AQ8WYN0 398 aa8.79□□□□□ -1
SRGAP1-202ENST00000537556 TRIB2Q92519 343 aa8.79□□□□□ -1
SRGAP1-202ENST00000537556 TANKQ92844 425 aa8.79□□□□□ -1
SRGAP1-202ENST00000537556 CDK5RAP1Q96SZ6 601 aaKnown RBP8.79□□□□□ -1
SRGAP1-202ENST00000537556 ADAM33Q9BZ11 813 aa8.79□□□□□ -1
SRGAP1-202ENST00000537556 KCTD10Q9H3F6 313 aa8.79□□□□□ -1
SRGAP1-202ENST00000537556 IFT122Q9HBG6 1241 aa8.79□□□□□ -1
SRGAP1-202ENST00000537556 GMIPQ9P107 970 aa8.79□□□□□ -1
SRGAP1-202ENST00000537556 CNTN3Q9P232 1028 aa8.79□□□□□ -1
SRGAP1-202ENST00000537556 PKD1L3Q7Z443 1732 aa8.79□□□□□ -1
SRGAP1-202ENST00000537556 E5RJQ4 531 aa8.79□□□□□ -1
SRGAP1-202ENST00000537556 TMX2-CTNND1H3BSU7 103 aa8.79□□□□□ -1
SRGAP1-202ENST00000537556 TNPO2O14787 897 aaKnown RBP8.79□□□□□ -1
SRGAP1-202ENST00000537556 B4GALT4O60513 344 aa8.79□□□□□ -1
SRGAP1-202ENST00000537556 JRKO75564 520 aa8.79□□□□□ -1
SRGAP1-202ENST00000537556 UQCRFS1P1P0C7P4 283 aa8.79□□□□□ -1
SRGAP1-202ENST00000537556 MYL4P12829 197 aa8.79□□□□□ -1
SRGAP1-202ENST00000537556 ZNF26P17031 533 aaPredicted RBP8.79□□□□□ -1
SRGAP1-202ENST00000537556 ITGAXP20702 1163 aa8.79□□□□□ -1
SRGAP1-202ENST00000537556 GABRB3P28472 473 aa8.79□□□□□ -1
SRGAP1-202ENST00000537556 NR4A2P43354 598 aa8.79□□□□□ -1
SRGAP1-202ENST00000537556 TMBIM6P55061 237 aa8.79□□□□□ -1
SRGAP1-202ENST00000537556 MRPS22P82650 360 aaKnown RBP8.79□□□□□ -1
SRGAP1-202ENST00000537556 ECT2LQ008S8 904 aa8.79□□□□□ -1
SRGAP1-202ENST00000537556 DRAP1Q14919 205 aaPredicted RBP8.79□□□□□ -1
SRGAP1-202ENST00000537556 STILQ15468 1287 aa8.79□□□□□ -1
SRGAP1-202ENST00000537556 NPTX1Q15818 432 aa8.79□□□□□ -1
SRGAP1-202ENST00000537556 LETM2Q2VYF4 491 aa8.79□□□□□ -1
SRGAP1-202ENST00000537556 PGS1Q32NB8 556 aa8.79□□□□□ -1
SRGAP1-202ENST00000537556 AGAP9Q5VTM2 703 aa8.79□□□□□ -1
SRGAP1-202ENST00000537556 KRT79Q5XKE5 535 aa8.79□□□□□ -1
SRGAP1-202ENST00000537556 UGT3A1Q6NUS8 523 aa8.79□□□□□ -1
SRGAP1-202ENST00000537556 PRR23CQ6ZRP0 262 aa8.79□□□□□ -1
SRGAP1-202ENST00000537556 CPNE9Q8IYJ1 553 aa8.79□□□□□ -1
SRGAP1-202ENST00000537556 GRPEL2Q8TAA5 225 aa8.79□□□□□ -1
SRGAP1-202ENST00000537556 OLIG1Q8TAK6 271 aa8.79□□□□□ -1
SRGAP1-202ENST00000537556 PAFAH2Q99487 392 aa8.79□□□□□ -1
SRGAP1-202ENST00000537556 TUBA1CQ9BQE3 449 aa8.79□□□□□ -1
SRGAP1-202ENST00000537556 EFHD1Q9BUP0 239 aa8.79□□□□□ -1
SRGAP1-202ENST00000537556 ANKRD60Q9BZ19 345 aa8.79□□□□□ -1
SRGAP1-202ENST00000537556 C12orf65Q9H3J6 166 aaKnown RBP8.79□□□□□ -1
SRGAP1-202ENST00000537556 FAM96AQ9H5X1 160 aa8.79□□□□□ -1
SRGAP1-202ENST00000537556 CPNE5Q9HCH3 593 aa8.79□□□□□ -1
SRGAP1-202ENST00000537556 TAS2R14Q9NYV8 317 aa8.79□□□□□ -1
SRGAP1-202ENST00000537556 TXNDC16Q9P2K2 825 aa8.79□□□□□ -1
SRGAP1-202ENST00000537556 PCDHGA8Q9Y5G5 932 aa8.79□□□□□ -1
SRGAP1-202ENST00000537556 ARHGAP33O14559 1287 aa8.79□□□□□ -1
SRGAP1-202ENST00000537556 DYRK3O43781 588 aa8.79□□□□□ -1
SRGAP1-202ENST00000537556 DEAF1O75398 565 aaPredicted RBP8.79□□□□□ -1
SRGAP1-202ENST00000537556 GPC4O75487 556 aa8.79□□□□□ -1
SRGAP1-202ENST00000537556 KRT8P05787 483 aa8.79□□□□□ -1
SRGAP1-202ENST00000537556 KITP10721 976 aa8.79□□□□□ -1
SRGAP1-202ENST00000537556 EEF1DP29692 281 aaKnown RBP8.79□□□□□ -1
SRGAP1-202ENST00000537556 PTGS2P35354 604 aa8.79□□□□□ -1
SRGAP1-202ENST00000537556 NAMPTP43490 491 aa8.79□□□□□ -1
SRGAP1-202ENST00000537556 ATN1P54259 1190 aaPredicted RBP8.79□□□□□ -1
SRGAP1-202ENST00000537556 TAGLNQ01995 201 aaKnown RBP8.79□□□□□ -1
SRGAP1-202ENST00000537556 BST1Q10588 318 aa8.79□□□□□ -1
SRGAP1-202ENST00000537556 PLEKHG7Q6ZR37 379 aa8.79□□□□□ -1
SRGAP1-202ENST00000537556 DENND5BQ6ZUT9 1274 aa8.79□□□□□ -1
SRGAP1-202ENST00000537556 REM2Q8IYK8 340 aaPredicted RBP8.79□□□□□ -1
SRGAP1-202ENST00000537556 VPS37AQ8NEZ2 397 aa8.79□□□□□ -1
SRGAP1-202ENST00000537556 ZC3H15Q8WU90 426 aaKnown RBP8.79□□□□□ -1
SRGAP1-202ENST00000537556 TTC9Q92623 222 aa8.79□□□□□ -1
SRGAP1-202ENST00000537556 PNMA5Q96PV4 448 aa8.79□□□□□ -1
SRGAP1-202ENST00000537556 NPLQ9BXD5 320 aaPredicted RBP8.79□□□□□ -1
SRGAP1-202ENST00000537556 MRPL9Q9BYD2 267 aaKnown RBP8.79□□□□□ -1
SRGAP1-202ENST00000537556 TRIT1Q9H3H1 467 aaKnown RBP8.79□□□□□ -1
SRGAP1-202ENST00000537556 IL20Q9NYY1 176 aa8.79□□□□□ -1
SRGAP1-202ENST00000537556 UBA2Q9UBT2 640 aaPredicted RBP8.79□□□□□ -1
SRGAP1-202ENST00000537556 AJAP1Q9UKB5 411 aaPredicted RBP8.79□□□□□ -1
SRGAP1-202ENST00000537556 ST14Q9Y5Y6 855 aa8.79□□□□□ -1
SRGAP1-202ENST00000537556 LMO7Q8WWI1 1683 aa8.79□□□□□ -1
SRGAP1-202ENST00000537556 MINDY4BA8MYZ0 360 aa8.78□□□□□ -1
SRGAP1-202ENST00000537556 RNF103O00237 685 aa8.78□□□□□ -1
SRGAP1-202ENST00000537556 DNALI1O14645 258 aaPredicted RBP8.78□□□□□ -1
SRGAP1-202ENST00000537556 POLR1CO15160 346 aaPredicted RBP8.78□□□□□ -1
SRGAP1-202ENST00000537556 ERBB2P04626 1255 aa8.78□□□□□ -1
SRGAP1-202ENST00000537556 CAPN1P07384 714 aa8.78□□□□□ -1
SRGAP1-202ENST00000537556 PCP11498 1178 aaKnown RBP8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms