RNA–Protein interactions for RNA: ENST00000536871.6

SMG6-203, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG6, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-203ENST00000536871 BRD8Q9H0E9 1235 aa14.08□□□□□ -0.16
SMG6-203ENST00000536871 TRABDQ9H4I3 376 aa14.08□□□□□ -0.16
SMG6-203ENST00000536871 TBK1Q9UHD2 729 aa14.08□□□□□ -0.16
SMG6-203ENST00000536871 NCAM2O15394 837 aa14.07□□□□□ -0.16
SMG6-203ENST00000536871 TMEM63AO94886 807 aa14.07□□□□□ -0.16
SMG6-203ENST00000536871 ZWINTO95229 277 aa14.07□□□□□ -0.16
SMG6-203ENST00000536871 PGK1P00558 417 aa14.07□□□□□ -0.16
SMG6-203ENST00000536871 GHRP10912 638 aa14.07□□□□□ -0.16
SMG6-203ENST00000536871 HOXD10P28358 340 aa14.07□□□□□ -0.16
SMG6-203ENST00000536871 RBL1P28749 1068 aa14.07□□□□□ -0.16
SMG6-203ENST00000536871 HCAR3P49019 387 aa14.07□□□□□ -0.16
SMG6-203ENST00000536871 TKTL1P51854 596 aa14.07□□□□□ -0.16
SMG6-203ENST00000536871 GPX6P59796 221 aa14.07□□□□□ -0.16
SMG6-203ENST00000536871 SCAPQ12770 1279 aa14.07□□□□□ -0.16
SMG6-203ENST00000536871 SPARCL1Q14515 664 aa14.07□□□□□ -0.16
SMG6-203ENST00000536871 FASTKD3Q14CZ7 662 aaKnown RBP14.07□□□□□ -0.16
SMG6-203ENST00000536871 PDK1Q15118 436 aa14.07□□□□□ -0.16
SMG6-203ENST00000536871 CA9Q16790 459 aa14.07□□□□□ -0.16
SMG6-203ENST00000536871 UPP1Q16831 310 aa14.07□□□□□ -0.16
SMG6-203ENST00000536871 DCAF6Q58WW2 860 aa14.07□□□□□ -0.16
SMG6-203ENST00000536871 MDH1BQ5I0G3 518 aa14.07□□□□□ -0.16
SMG6-203ENST00000536871 RAB41Q5JT25 222 aa14.07□□□□□ -0.16
SMG6-203ENST00000536871 FNBP1LQ5T0N5 605 aa14.07□□□□□ -0.16
SMG6-203ENST00000536871 LGSNQ5TDP6 509 aa14.07□□□□□ -0.16
SMG6-203ENST00000536871 RGS9BPQ6ZS82 235 aa14.07□□□□□ -0.16
SMG6-203ENST00000536871 PAQR9Q6ZVX9 377 aa14.07□□□□□ -0.16
SMG6-203ENST00000536871 FAM35AQ86V20 835 aa14.07□□□□□ -0.16
SMG6-203ENST00000536871 PPP1R13LQ8WUF5 828 aa14.07□□□□□ -0.16
SMG6-203ENST00000536871 TFB1MQ8WVM0 346 aaKnown RBP14.07□□□□□ -0.16
SMG6-203ENST00000536871 KDM4CQ9H3R0 1056 aa14.07□□□□□ -0.16
SMG6-203ENST00000536871 KRT82Q9NSB4 513 aa14.07□□□□□ -0.16
SMG6-203ENST00000536871 ETNK2Q9NVF9 386 aa14.07□□□□□ -0.16
SMG6-203ENST00000536871 GPATCH2LQ9NWQ4 482 aa14.07□□□□□ -0.16
SMG6-203ENST00000536871 MTMR10Q9NXD2 777 aa14.07□□□□□ -0.16
SMG6-203ENST00000536871 CTNNAL1Q9UBT7 734 aa14.07□□□□□ -0.16
SMG6-203ENST00000536871 TEX264Q9Y6I9 313 aa14.07□□□□□ -0.16
SMG6-203ENST00000536871 GOLGA8MH3BSY2 632 aa14.06□□□□□ -0.16
SMG6-203ENST00000536871 CAPN9O14815 690 aa14.06□□□□□ -0.16
SMG6-203ENST00000536871 PPP1R12AO14974 1030 aaPredicted RBP14.06□□□□□ -0.16
SMG6-203ENST00000536871 INPPL1O15357 1258 aa14.06□□□□□ -0.16
SMG6-203ENST00000536871 AP1G2O75843 785 aa14.06□□□□□ -0.16
SMG6-203ENST00000536871 ASGR1P07306 291 aa14.06□□□□□ -0.16
SMG6-203ENST00000536871 MLNP12872 115 aa14.06□□□□□ -0.16
SMG6-203ENST00000536871 GCAP28676 217 aa14.06□□□□□ -0.16
SMG6-203ENST00000536871 CTGFP29279 349 aa14.06□□□□□ -0.16
SMG6-203ENST00000536871 THPOP40225 353 aa14.06□□□□□ -0.16
SMG6-203ENST00000536871 DAOAP59103 153 aa14.06□□□□□ -0.16
SMG6-203ENST00000536871 DEUP1Q05D60 604 aa14.06□□□□□ -0.16
SMG6-203ENST00000536871 DSC3Q14574 896 aa14.06□□□□□ -0.16
SMG6-203ENST00000536871 INTS6LQ5JSJ4 861 aaKnown RBP14.06□□□□□ -0.16
SMG6-203ENST00000536871 AGMOQ6ZNB7 445 aa14.06□□□□□ -0.16
SMG6-203ENST00000536871 CCNJLQ8IV13 435 aa14.06□□□□□ -0.16
SMG6-203ENST00000536871 CYP4X1Q8N118 509 aa14.06□□□□□ -0.16
SMG6-203ENST00000536871 GBP7Q8N8V2 638 aaPredicted RBP14.06□□□□□ -0.16
SMG6-203ENST00000536871 CLEC4CQ8WTT0 213 aa14.06□□□□□ -0.16
SMG6-203ENST00000536871 OLFM3Q96PB7 478 aa14.06□□□□□ -0.16
SMG6-203ENST00000536871 KCTD15Q96SI1 283 aaPredicted RBP14.06□□□□□ -0.16
SMG6-203ENST00000536871 EIF2B3Q9NR50 452 aaKnown RBP14.06□□□□□ -0.16
SMG6-203ENST00000536871 PADI3Q9ULW8 664 aa14.06□□□□□ -0.16
SMG6-203ENST00000536871 USP3Q9Y6I4 520 aa14.06□□□□□ -0.16
SMG6-203ENST00000536871 TM9SF1O15321 606 aa14.06□□□□□ -0.16
SMG6-203ENST00000536871 OPHN1O60890 802 aa14.06□□□□□ -0.16
SMG6-203ENST00000536871 DGKIO75912 1065 aa14.06□□□□□ -0.16
SMG6-203ENST00000536871 FAM155BO75949 473 aa14.06□□□□□ -0.16
SMG6-203ENST00000536871 SUN1O94901 812 aa14.06□□□□□ -0.16
SMG6-203ENST00000536871 CTSHP09668 335 aa14.06□□□□□ -0.16
SMG6-203ENST00000536871 CLCNKBP51801 687 aa14.06□□□□□ -0.16
SMG6-203ENST00000536871 CACNB2Q08289 660 aaPredicted RBP14.06□□□□□ -0.16
SMG6-203ENST00000536871 IFT88Q13099 833 aa14.06□□□□□ -0.16
SMG6-203ENST00000536871 TUSC3Q13454 348 aa14.06□□□□□ -0.16
SMG6-203ENST00000536871 CYS1Q717R9 158 aa14.06□□□□□ -0.16
SMG6-203ENST00000536871 RNF180Q86T96 592 aa14.06□□□□□ -0.16
SMG6-203ENST00000536871 ANKMY2Q8IV38 441 aa14.06□□□□□ -0.16
SMG6-203ENST00000536871 LRRC34Q8IZ02 419 aa14.06□□□□□ -0.16
SMG6-203ENST00000536871 THEM5Q8N1Q8 247 aa14.06□□□□□ -0.16
SMG6-203ENST00000536871 FBF1Q8TES7 1133 aa14.06□□□□□ -0.16
SMG6-203ENST00000536871 CSNK1G1Q9HCP0 422 aa14.06□□□□□ -0.16
SMG6-203ENST00000536871 CRTAC1Q9NQ79 661 aa14.06□□□□□ -0.16
SMG6-203ENST00000536871 ZNF180Q9UJW8 692 aa14.06□□□□□ -0.16
SMG6-203ENST00000536871 ABT1Q9ULW3 272 aaKnown RBP14.06□□□□□ -0.16
SMG6-203ENST00000536871 NOD1Q9Y239 953 aa14.06□□□□□ -0.16
SMG6-203ENST00000536871 M0QYT0 321 aa14.05□□□□□ -0.16
SMG6-203ENST00000536871 MTSS1O43312 755 aa14.05□□□□□ -0.16
SMG6-203ENST00000536871 HCRTO43612 131 aa14.05□□□□□ -0.16
SMG6-203ENST00000536871 FSBPO95073 299 aa14.05□□□□□ -0.16
SMG6-203ENST00000536871 TYMPP19971 482 aa14.05□□□□□ -0.16
SMG6-203ENST00000536871 CYP2C18P33260 490 aa14.05□□□□□ -0.16
SMG6-203ENST00000536871 IFNAR2P48551 515 aa14.05□□□□□ -0.16
SMG6-203ENST00000536871 GLUD2P49448 558 aa14.05□□□□□ -0.16
SMG6-203ENST00000536871 SCNN1GP51170 649 aa14.05□□□□□ -0.16
SMG6-203ENST00000536871 MAP3K7CLP57077 242 aa14.05□□□□□ -0.16
SMG6-203ENST00000536871 NOGQ13253 232 aa14.05□□□□□ -0.16
SMG6-203ENST00000536871 SEMA5AQ13591 1074 aa14.05□□□□□ -0.16
SMG6-203ENST00000536871 PAFAH1B3Q15102 231 aaKnown RBP14.05□□□□□ -0.16
SMG6-203ENST00000536871 KCNA10Q16322 511 aa14.05□□□□□ -0.16
SMG6-203ENST00000536871 QPCTQ16769 361 aa14.05□□□□□ -0.16
SMG6-203ENST00000536871 LACTB2Q53H82 288 aaPredicted RBP14.05□□□□□ -0.16
SMG6-203ENST00000536871 RAB6CQ53S08 254 aa14.05□□□□□ -0.16
SMG6-203ENST00000536871 NCBP2-AS2Q69YL0 99 aa14.05□□□□□ -0.16
SMG6-203ENST00000536871 CCSAPQ6IQ19 270 aaPredicted RBP14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms