RNA–Protein interactions for RNA: ENST00000536003.5

PAAF1-207, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 1 (best) BASIC

Gene PAAF1, Length 1,639 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-207ENST00000536003 USP39Q53GS9 565 aaKnown RBP16.1■□□□□ 0.17
PAAF1-207ENST00000536003 EOGTQ5NDL2 527 aa16.1■□□□□ 0.17
PAAF1-207ENST00000536003 PM20D1Q6GTS8 502 aa16.1■□□□□ 0.17
PAAF1-207ENST00000536003 TMEM270Q6UE05 265 aa16.1■□□□□ 0.17
PAAF1-207ENST00000536003 TADA2BQ86TJ2 420 aa16.1■□□□□ 0.17
PAAF1-207ENST00000536003 ARHGEF19Q8IW93 802 aa16.1■□□□□ 0.17
PAAF1-207ENST00000536003 UBXN6Q9BZV1 441 aa16.1■□□□□ 0.17
PAAF1-207ENST00000536003 CD248Q9HCU0 757 aa16.1■□□□□ 0.17
PAAF1-207ENST00000536003 MARCH2Q9P0N8 246 aa16.1■□□□□ 0.17
PAAF1-207ENST00000536003 BCCIPQ9P287 314 aaKnown RBP eCLIP16.1■□□□□ 0.17
PAAF1-207ENST00000536003 MBD1Q9UIS9 605 aaPredicted RBP16.1■□□□□ 0.17
PAAF1-207ENST00000536003 AGO1Q9UL18 857 aaKnown RBP16.1■□□□□ 0.17
PAAF1-207ENST00000536003 CIZ1Q9ULV3 898 aaPredicted RBP16.1■□□□□ 0.17
PAAF1-207ENST00000536003 ACACBO00763 2458 aa16.1■□□□□ 0.17
PAAF1-207ENST00000536003 TPRP12270 2363 aaKnown RBP16.1■□□□□ 0.17
PAAF1-207ENST00000536003 BCLAF3A2AJT9 711 aaKnown RBP16.09■□□□□ 0.17
PAAF1-207ENST00000536003 YJEFN3A6XGL0 299 aa16.09■□□□□ 0.17
PAAF1-207ENST00000536003 E7ENQ6 273 aa16.09■□□□□ 0.17
PAAF1-207ENST00000536003 CISD3P0C7P0 127 aa16.09■□□□□ 0.17
PAAF1-207ENST00000536003 HOXB2P14652 356 aa16.09■□□□□ 0.17
PAAF1-207ENST00000536003 GABRG2P18507 467 aa16.09■□□□□ 0.17
PAAF1-207ENST00000536003 TBXAS1P24557 533 aaPredicted RBP16.09■□□□□ 0.17
PAAF1-207ENST00000536003 P2RY2P41231 377 aa16.09■□□□□ 0.17
PAAF1-207ENST00000536003 DGKGP49619 791 aa16.09■□□□□ 0.17
PAAF1-207ENST00000536003 FYB2Q5VWT5 728 aa16.09■□□□□ 0.17
PAAF1-207ENST00000536003 KIAA1211LQ6NV74 962 aa16.09■□□□□ 0.17
PAAF1-207ENST00000536003 RSRC2Q7L4I2 434 aaKnown RBP16.09■□□□□ 0.17
PAAF1-207ENST00000536003 RRAGAQ7L523 313 aa16.09■□□□□ 0.17
PAAF1-207ENST00000536003 PPM1KQ8N3J5 372 aa16.09■□□□□ 0.17
PAAF1-207ENST00000536003 C12orf50Q8NA57 414 aaPredicted RBP16.09■□□□□ 0.17
PAAF1-207ENST00000536003 NT5C1BQ96P26 610 aa16.09■□□□□ 0.17
PAAF1-207ENST00000536003 POLMQ9NP87 494 aaPredicted RBP16.09■□□□□ 0.17
PAAF1-207ENST00000536003 CLEC4EQ9ULY5 219 aa16.09■□□□□ 0.17
PAAF1-207ENST00000536003 STARD13Q9Y3M8 1113 aa16.09■□□□□ 0.17
PAAF1-207ENST00000536003 PI4KAP42356 2102 aa16.09■□□□□ 0.17
PAAF1-207ENST00000536003 CKAP5Q14008 2032 aa16.09■□□□□ 0.17
PAAF1-207ENST00000536003 SLC12A8A0AV02 714 aa16.08■□□□□ 0.17
PAAF1-207ENST00000536003 PATE3B3GLJ2 98 aa16.08■□□□□ 0.17
PAAF1-207ENST00000536003 PIK3R2O00459 728 aa16.08■□□□□ 0.17
PAAF1-207ENST00000536003 PMM2O15305 246 aa16.08■□□□□ 0.17
PAAF1-207ENST00000536003 ALDH1A2O94788 518 aa16.08■□□□□ 0.17
PAAF1-207ENST00000536003 RHOBTB1O94844 696 aa16.08■□□□□ 0.17
PAAF1-207ENST00000536003 PENKP01210 267 aaPredicted RBP16.08■□□□□ 0.17
PAAF1-207ENST00000536003 BRD2P25440 801 aaKnown RBP16.08■□□□□ 0.17
PAAF1-207ENST00000536003 SLC8A3P57103 927 aa16.08■□□□□ 0.17
PAAF1-207ENST00000536003 MAP7D1Q3KQU3 841 aa16.08■□□□□ 0.17
PAAF1-207ENST00000536003 DENND1CQ8IV53 801 aa16.08■□□□□ 0.17
PAAF1-207ENST00000536003 TRIM59Q8IWR1 403 aa16.08■□□□□ 0.17
PAAF1-207ENST00000536003 EDEM1Q92611 657 aa16.08■□□□□ 0.17
PAAF1-207ENST00000536003 XPO6Q96QU8 1125 aaKnown RBP16.08■□□□□ 0.17
PAAF1-207ENST00000536003 CDK5RAP1Q96SZ6 601 aaKnown RBP16.08■□□□□ 0.17
PAAF1-207ENST00000536003 VPS45Q9NRW7 570 aa16.08■□□□□ 0.17
PAAF1-207ENST00000536003 CACNA2D2Q9NY47 1150 aa16.08■□□□□ 0.17
PAAF1-207ENST00000536003 WDR35Q9P2L0 1181 aa16.08■□□□□ 0.17
PAAF1-207ENST00000536003 HESX1Q9UBX0 185 aa16.08■□□□□ 0.17
PAAF1-207ENST00000536003 RAD54BQ9Y620 910 aa16.08■□□□□ 0.17
PAAF1-207ENST00000536003 ADAMTS9Q9P2N4 1935 aa16.08■□□□□ 0.16
PAAF1-207ENST00000536003 LNP1A1A4G5 178 aa16.08■□□□□ 0.16
PAAF1-207ENST00000536003 MSI1O43347 362 aaKnown RBP16.08■□□□□ 0.16
PAAF1-207ENST00000536003 VDRP11473 427 aa16.08■□□□□ 0.16
PAAF1-207ENST00000536003 PTGER3P43115 390 aa16.08■□□□□ 0.16
PAAF1-207ENST00000536003 RGS7P49802 495 aa16.08■□□□□ 0.16
PAAF1-207ENST00000536003 YWHAEP62258 255 aaKnown RBP16.08■□□□□ 0.16
PAAF1-207ENST00000536003 COG7P83436 770 aa16.08■□□□□ 0.16
PAAF1-207ENST00000536003 PAK1Q13153 545 aa16.08■□□□□ 0.16
PAAF1-207ENST00000536003 PPM1JQ5JR12 505 aa16.08■□□□□ 0.16
PAAF1-207ENST00000536003 PMF1Q6P1K2 205 aa16.08■□□□□ 0.16
PAAF1-207ENST00000536003 ARMCX6Q7L4S7 300 aa16.08■□□□□ 0.16
PAAF1-207ENST00000536003 CHPFQ8IZ52 775 aa16.08■□□□□ 0.16
PAAF1-207ENST00000536003 ARHGAP18Q8N392 663 aa16.08■□□□□ 0.16
PAAF1-207ENST00000536003 CLEC4CQ8WTT0 213 aa16.08■□□□□ 0.16
PAAF1-207ENST00000536003 SLC6A17Q9H1V8 727 aa16.08■□□□□ 0.16
PAAF1-207ENST00000536003 LRRC4Q9HBW1 653 aa16.08■□□□□ 0.16
PAAF1-207ENST00000536003 CD93Q9NPY3 652 aa16.08■□□□□ 0.16
PAAF1-207ENST00000536003 CALCOCO1Q9P1Z2 691 aa16.08■□□□□ 0.16
PAAF1-207ENST00000536003 SFMBT1Q9UHJ3 866 aa16.08■□□□□ 0.16
PAAF1-207ENST00000536003 FBXO10Q9UK96 956 aa16.08■□□□□ 0.16
PAAF1-207ENST00000536003 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.08■□□□□ 0.16
PAAF1-207ENST00000536003 PCDHB4Q9Y5E5 795 aa16.08■□□□□ 0.16
PAAF1-207ENST00000536003 ATXN2Q99700 1313 aaKnown RBP16.07■□□□□ 0.16
PAAF1-207ENST00000536003 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.07■□□□□ 0.16
PAAF1-207ENST00000536003 BICDL2A1A5D9 508 aa16.07■□□□□ 0.16
PAAF1-207ENST00000536003 WASH3PC4AMC7 463 aa16.07■□□□□ 0.16
PAAF1-207ENST00000536003 M0QYV0 167 aa16.07■□□□□ 0.16
PAAF1-207ENST00000536003 FOXD2O60548 495 aaPredicted RBP16.07■□□□□ 0.16
PAAF1-207ENST00000536003 CAVIN2O95810 425 aa16.07■□□□□ 0.16
PAAF1-207ENST00000536003 SETSIPP0DME0 302 aa16.07■□□□□ 0.16
PAAF1-207ENST00000536003 LCP1P13796 627 aa16.07■□□□□ 0.16
PAAF1-207ENST00000536003 NDUFV2P19404 249 aa16.07■□□□□ 0.16
PAAF1-207ENST00000536003 NTSR1P30989 418 aa16.07■□□□□ 0.16
PAAF1-207ENST00000536003 PPP1R2P41236 205 aa16.07■□□□□ 0.16
PAAF1-207ENST00000536003 ZNF132P52740 706 aa16.07■□□□□ 0.16
PAAF1-207ENST00000536003 KCNH2Q12809 1159 aa16.07■□□□□ 0.16
PAAF1-207ENST00000536003 GEN1Q17RS7 908 aa16.07■□□□□ 0.16
PAAF1-207ENST00000536003 PREPLQ4J6C6 727 aaPredicted RBP16.07■□□□□ 0.16
PAAF1-207ENST00000536003 STPG1Q5TH74 334 aa16.07■□□□□ 0.16
PAAF1-207ENST00000536003 FOXR2Q6PJQ5 311 aa16.07■□□□□ 0.16
PAAF1-207ENST00000536003 LCLAT1Q6UWP7 414 aa16.07■□□□□ 0.16
PAAF1-207ENST00000536003 TRMT11Q7Z4G4 463 aaKnown RBP16.07■□□□□ 0.16
PAAF1-207ENST00000536003 FMNL3Q8IVF7 1028 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms