RNA–Protein interactions for RNA: ENST00000535689.5

SNHG1-202, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-202ENST00000535689 ARHGAP40Q5TG30 622 aa3.82□□□□□ -1.8
SNHG1-202ENST00000535689 B3GNTL1Q67FW5 361 aaPredicted RBP3.82□□□□□ -1.8
SNHG1-202ENST00000535689 ZNF804AQ7Z570 1209 aa3.82□□□□□ -1.8
SNHG1-202ENST00000535689 WDR53Q7Z5U6 358 aaPredicted RBP3.82□□□□□ -1.8
SNHG1-202ENST00000535689 GRASPQ7Z6J2 395 aaPredicted RBP3.82□□□□□ -1.8
SNHG1-202ENST00000535689 CTU1Q7Z7A3 348 aaKnown RBP3.82□□□□□ -1.8
SNHG1-202ENST00000535689 DTX2Q86UW9 622 aa3.82□□□□□ -1.8
SNHG1-202ENST00000535689 LNX2Q8N448 690 aa3.82□□□□□ -1.8
SNHG1-202ENST00000535689 ZNF527Q8NB42 609 aa3.82□□□□□ -1.8
SNHG1-202ENST00000535689 SPATA5Q8NB90 893 aa3.82□□□□□ -1.8
SNHG1-202ENST00000535689 CYP2W1Q8TAV3 490 aa3.82□□□□□ -1.8
SNHG1-202ENST00000535689 PARD3BQ8TEW8 1205 aa3.82□□□□□ -1.8
SNHG1-202ENST00000535689 OSCP1Q8WVF1 389 aa3.82□□□□□ -1.8
SNHG1-202ENST00000535689 PPP2R3CQ969Q6 453 aa3.82□□□□□ -1.8
SNHG1-202ENST00000535689 ZDHHC12Q96GR4 267 aa3.82□□□□□ -1.8
SNHG1-202ENST00000535689 VPS50Q96JG6 964 aa3.82□□□□□ -1.8
SNHG1-202ENST00000535689 VKORC1Q9BQB6 163 aa3.82□□□□□ -1.8
SNHG1-202ENST00000535689 ZSWIM1Q9BR11 485 aa3.82□□□□□ -1.8
SNHG1-202ENST00000535689 DPCDQ9BVM2 203 aaPredicted RBP3.82□□□□□ -1.8
SNHG1-202ENST00000535689 UNKLQ9H9P5 680 aaKnown RBP3.82□□□□□ -1.8
SNHG1-202ENST00000535689 HELLSQ9NRZ9 838 aa3.82□□□□□ -1.8
SNHG1-202ENST00000535689 KLC4Q9NSK0 619 aa3.82□□□□□ -1.8
SNHG1-202ENST00000535689 NKX1-2Q9UD57 310 aaPredicted RBP3.82□□□□□ -1.8
SNHG1-202ENST00000535689 CDY1Q9Y6F8 540 aa3.82□□□□□ -1.8
SNHG1-202ENST00000535689 CACNA1SQ13698 1873 aa3.81□□□□□ -1.8
SNHG1-202ENST00000535689 COL5A3P25940 1745 aaPredicted RBP3.81□□□□□ -1.8
SNHG1-202ENST00000535689 MEGF6O75095 1541 aa3.81□□□□□ -1.8
SNHG1-202ENST00000535689 NCANO14594 1321 aa3.81□□□□□ -1.8
SNHG1-202ENST00000535689 MARCH11A6NNE9 402 aa3.81□□□□□ -1.8
SNHG1-202ENST00000535689 RAB27BO00194 218 aa3.81□□□□□ -1.8
SNHG1-202ENST00000535689 IFRD1O00458 451 aaPredicted RBP3.81□□□□□ -1.8
SNHG1-202ENST00000535689 PRRG2O14669 202 aa3.81□□□□□ -1.8
SNHG1-202ENST00000535689 FYB1O15117 783 aa3.81□□□□□ -1.8
SNHG1-202ENST00000535689 MPPED1O15442 326 aa3.81□□□□□ -1.8
SNHG1-202ENST00000535689 PROM1O43490 865 aa3.81□□□□□ -1.8
SNHG1-202ENST00000535689 FZD7O75084 574 aa3.81□□□□□ -1.8
SNHG1-202ENST00000535689 ITGAMP11215 1152 aa3.81□□□□□ -1.8
SNHG1-202ENST00000535689 FOLR3P41439 243 aa3.81□□□□□ -1.8
SNHG1-202ENST00000535689 CCT5P48643 541 aa3.81□□□□□ -1.8
SNHG1-202ENST00000535689 DGKQP52824 942 aa3.81□□□□□ -1.8
SNHG1-202ENST00000535689 PTTG1IPP53801 180 aa3.81□□□□□ -1.8
SNHG1-202ENST00000535689 LILRA4P59901 499 aa3.81□□□□□ -1.8
SNHG1-202ENST00000535689 SUMO2P61956 95 aaKnown RBP3.81□□□□□ -1.8
SNHG1-202ENST00000535689 DDR1Q08345 913 aa3.81□□□□□ -1.8
SNHG1-202ENST00000535689 STK3Q13188 491 aa3.81□□□□□ -1.8
SNHG1-202ENST00000535689 MPP3Q13368 585 aa3.81□□□□□ -1.8
SNHG1-202ENST00000535689 BLMHQ13867 455 aa3.81□□□□□ -1.8
SNHG1-202ENST00000535689 RRS1Q15050 365 aaKnown RBP3.81□□□□□ -1.8
SNHG1-202ENST00000535689 ARHGEF6Q15052 776 aa3.81□□□□□ -1.8
SNHG1-202ENST00000535689 ST3GAL2Q16842 350 aa3.81□□□□□ -1.8
SNHG1-202ENST00000535689 ZXDCQ2QGD7 858 aaPredicted RBP3.81□□□□□ -1.8
SNHG1-202ENST00000535689 CD300EQ496F6 205 aaPredicted RBP3.81□□□□□ -1.8
SNHG1-202ENST00000535689 HSP90AB4PQ58FF6 505 aa3.81□□□□□ -1.8
SNHG1-202ENST00000535689 RBM20Q5T481 1227 aaKnown RBP3.81□□□□□ -1.8
SNHG1-202ENST00000535689 FAXCQ5TGI0 409 aa3.81□□□□□ -1.8
SNHG1-202ENST00000535689 TLDC1Q6P9B6 456 aa3.81□□□□□ -1.8
SNHG1-202ENST00000535689 GATAD2AQ86YP4 633 aa3.81□□□□□ -1.8
SNHG1-202ENST00000535689 SPICE1Q8N0Z3 855 aa3.81□□□□□ -1.8
SNHG1-202ENST00000535689 VGLL2Q8N8G2 317 aa3.81□□□□□ -1.8
SNHG1-202ENST00000535689 BPIFB1Q8TDL5 484 aa3.81□□□□□ -1.8
SNHG1-202ENST00000535689 ZNF384Q8TF68 577 aa3.81□□□□□ -1.8
SNHG1-202ENST00000535689 CACTINQ8WUQ7 758 aaKnown RBP3.81□□□□□ -1.8
SNHG1-202ENST00000535689 CCT6BQ92526 530 aa3.81□□□□□ -1.8
SNHG1-202ENST00000535689 ZNF503Q96F45 646 aa3.81□□□□□ -1.8
SNHG1-202ENST00000535689 FAM227BQ96M60 508 aa3.81□□□□□ -1.8
SNHG1-202ENST00000535689 HERPUD2Q9BSE4 406 aa3.81□□□□□ -1.8
SNHG1-202ENST00000535689 POLR3GLQ9BT43 218 aa3.81□□□□□ -1.8
SNHG1-202ENST00000535689 TRIM5Q9C035 493 aa3.81□□□□□ -1.8
SNHG1-202ENST00000535689 SERHL2Q9H4I8 314 aa3.81□□□□□ -1.8
SNHG1-202ENST00000535689 TMEM8AQ9HCN3 771 aa3.81□□□□□ -1.8
SNHG1-202ENST00000535689 TBC1D23Q9NUY8 699 aa3.81□□□□□ -1.8
SNHG1-202ENST00000535689 HSFX1Q9UBD0 423 aa3.81□□□□□ -1.8
SNHG1-202ENST00000535689 STEAP1Q9UHE8 339 aa3.81□□□□□ -1.8
SNHG1-202ENST00000535689 MID2Q9UJV3 735 aa3.81□□□□□ -1.8
SNHG1-202ENST00000535689 NDRG4Q9ULP0 352 aaKnown RBP3.81□□□□□ -1.8
SNHG1-202ENST00000535689 AGAP1Q9UPQ3 857 aa3.81□□□□□ -1.8
SNHG1-202ENST00000535689 NRXN2Q9P2S2 1712 aa3.81□□□□□ -1.8
SNHG1-202ENST00000535689 RAB3GAP2Q9H2M9 1393 aa3.8□□□□□ -1.8
SNHG1-202ENST00000535689 SLX4Q8IY92 1834 aa3.8□□□□□ -1.8
SNHG1-202ENST00000535689 PRSS23O95084 383 aa3.8□□□□□ -1.8
SNHG1-202ENST00000535689 CELF2O95319 508 aaKnown RBP3.8□□□□□ -1.8
SNHG1-202ENST00000535689 TTLL1O95922 423 aa3.8□□□□□ -1.8
SNHG1-202ENST00000535689 ELANEP08246 267 aa3.8□□□□□ -1.8
SNHG1-202ENST00000535689 TSHRP16473 764 aa3.8□□□□□ -1.8
SNHG1-202ENST00000535689 NDUFB7P17568 137 aa3.8□□□□□ -1.8
SNHG1-202ENST00000535689 TGM1P22735 817 aa3.8□□□□□ -1.8
SNHG1-202ENST00000535689 SLC5A2P31639 672 aa3.8□□□□□ -1.8
SNHG1-202ENST00000535689 PPM1AP35813 382 aa3.8□□□□□ -1.8
SNHG1-202ENST00000535689 PTDSS1P48651 473 aaKnown RBP3.8□□□□□ -1.8
SNHG1-202ENST00000535689 BCAT1P54687 386 aa3.8□□□□□ -1.8
SNHG1-202ENST00000535689 NSUN2Q08J23 767 aaKnown RBP eCLIP3.8□□□□□ -1.8
SNHG1-202ENST00000535689 MYO1EQ12965 1108 aa3.8□□□□□ -1.8
SNHG1-202ENST00000535689 CLCA4Q14CN2 919 aa3.8□□□□□ -1.8
SNHG1-202ENST00000535689 TNIP1Q15025 636 aa3.8□□□□□ -1.8
SNHG1-202ENST00000535689 CSRP2Q16527 193 aa3.8□□□□□ -1.8
SNHG1-202ENST00000535689 ZNF750Q32MQ0 723 aa3.8□□□□□ -1.8
SNHG1-202ENST00000535689 GRAMD1BQ3KR37 738 aa3.8□□□□□ -1.8
SNHG1-202ENST00000535689 CST9Q5W186 159 aa3.8□□□□□ -1.8
SNHG1-202ENST00000535689 PLAG1Q6DJT9 500 aa3.8□□□□□ -1.8
SNHG1-202ENST00000535689 HIBCHQ6NVY1 386 aaPredicted RBP3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms