RNA–Protein interactions for RNA: ENST00000535601.5

HTATSF1-204, Transcript of HIV-1 Tat specific factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HTATSF1, Length 3,019 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTATSF1-204ENST00000535601 LHX1P48742 406 aa18.96■□□□□ 0.63
HTATSF1-204ENST00000535601 DEUP1Q05D60 604 aa18.96■□□□□ 0.63
HTATSF1-204ENST00000535601 NLRP14Q86W24 1093 aa18.96■□□□□ 0.63
HTATSF1-204ENST00000535601 DEPDC1BQ8WUY9 529 aa18.96■□□□□ 0.63
HTATSF1-204ENST00000535601 HHIPL1Q96JK4 782 aa18.96■□□□□ 0.63
HTATSF1-204ENST00000535601 CCT8L2Q96SF2 557 aa18.96■□□□□ 0.63
HTATSF1-204ENST00000535601 SEPT10Q9P0V9 454 aa18.96■□□□□ 0.63
HTATSF1-204ENST00000535601 RANBP2P49792 3224 aaKnown RBP18.95■□□□□ 0.62
HTATSF1-204ENST00000535601 TOMM70O94826 608 aa18.95■□□□□ 0.62
HTATSF1-204ENST00000535601 APRTP07741 180 aa18.95■□□□□ 0.62
HTATSF1-204ENST00000535601 CST5P28325 142 aaPredicted RBP18.95■□□□□ 0.62
HTATSF1-204ENST00000535601 VEGFBP49765 207 aa18.95■□□□□ 0.62
HTATSF1-204ENST00000535601 SNX16P57768 344 aa18.95■□□□□ 0.62
HTATSF1-204ENST00000535601 DAOAP59103 153 aa18.95■□□□□ 0.62
HTATSF1-204ENST00000535601 DPYSL2Q16555 572 aa18.95■□□□□ 0.62
HTATSF1-204ENST00000535601 NCBP2-AS2Q69YL0 99 aa18.95■□□□□ 0.62
HTATSF1-204ENST00000535601 SLC9A4Q6AI14 798 aa18.95■□□□□ 0.62
HTATSF1-204ENST00000535601 OVOS1Q6IE37 1185 aa18.95■□□□□ 0.62
HTATSF1-204ENST00000535601 ZNF296Q8WUU4 475 aaPredicted RBP18.95■□□□□ 0.62
HTATSF1-204ENST00000535601 EPN3Q9H201 632 aa18.95■□□□□ 0.62
HTATSF1-204ENST00000535601 ZNF623O75123 536 aa18.95■□□□□ 0.62
HTATSF1-204ENST00000535601 METTL18O95568 372 aa18.95■□□□□ 0.62
HTATSF1-204ENST00000535601 ODC1P11926 461 aa18.95■□□□□ 0.62
HTATSF1-204ENST00000535601 CENPUQ71F23 418 aa18.95■□□□□ 0.62
HTATSF1-204ENST00000535601 TEKT4Q8WW24 435 aa18.95■□□□□ 0.62
HTATSF1-204ENST00000535601 RSPH1Q8WYR4 309 aa18.95■□□□□ 0.62
HTATSF1-204ENST00000535601 DDIT4Q9NX09 232 aa18.95■□□□□ 0.62
HTATSF1-204ENST00000535601 DTLQ9NZJ0 730 aa18.95■□□□□ 0.62
HTATSF1-204ENST00000535601 FZD10Q9ULW2 581 aa18.95■□□□□ 0.62
HTATSF1-204ENST00000535601 PTCH2Q9Y6C5 1203 aa18.95■□□□□ 0.62
HTATSF1-204ENST00000535601 NT5C1B-RDH14C9J2C7 533 aa18.95■□□□□ 0.62
HTATSF1-204ENST00000535601 MMP13P45452 471 aa18.95■□□□□ 0.62
HTATSF1-204ENST00000535601 GPR15P49685 360 aa18.95■□□□□ 0.62
HTATSF1-204ENST00000535601 ATN1P54259 1190 aaPredicted RBP18.95■□□□□ 0.62
HTATSF1-204ENST00000535601 TUSC3Q13454 348 aa18.95■□□□□ 0.62
HTATSF1-204ENST00000535601 OLIG2Q13516 323 aa18.95■□□□□ 0.62
HTATSF1-204ENST00000535601 CEP57Q86XR8 500 aa18.95■□□□□ 0.62
HTATSF1-204ENST00000535601 ARFGAP2Q8N6H7 521 aa18.95■□□□□ 0.62
HTATSF1-204ENST00000535601 CCHCR1Q8TD31 782 aa18.95■□□□□ 0.62
HTATSF1-204ENST00000535601 PYROXD1Q8WU10 500 aa18.95■□□□□ 0.62
HTATSF1-204ENST00000535601 POPDC2Q9HBU9 364 aa18.95■□□□□ 0.62
HTATSF1-204ENST00000535601 SHOC2Q9UQ13 582 aa18.95■□□□□ 0.62
HTATSF1-204ENST00000535601 SCN5AQ14524 2016 aa18.95■□□□□ 0.62
HTATSF1-204ENST00000535601 TSC2P49815 1807 aa18.94■□□□□ 0.62
HTATSF1-204ENST00000535601 TMEM120BA0PK00 339 aa18.94■□□□□ 0.62
HTATSF1-204ENST00000535601 HHLA1C9JL84 531 aa18.94■□□□□ 0.62
HTATSF1-204ENST00000535601 SOAT2O75908 522 aa18.94■□□□□ 0.62
HTATSF1-204ENST00000535601 AGTP01019 485 aa18.94■□□□□ 0.62
HTATSF1-204ENST00000535601 DESP17661 470 aa18.94■□□□□ 0.62
HTATSF1-204ENST00000535601 RNASELQ05823 741 aaKnown RBP18.94■□□□□ 0.62
HTATSF1-204ENST00000535601 RPAINQ86UA6 219 aa18.94■□□□□ 0.62
HTATSF1-204ENST00000535601 ZNF598Q86UK7 904 aaKnown RBP18.94■□□□□ 0.62
HTATSF1-204ENST00000535601 C4orf33Q8N1A6 199 aa18.94■□□□□ 0.62
HTATSF1-204ENST00000535601 NPY6RQ99463 290 aa18.94■□□□□ 0.62
HTATSF1-204ENST00000535601 KLF6Q99612 283 aaPredicted RBP18.94■□□□□ 0.62
HTATSF1-204ENST00000535601 ZNF670Q9BS34 389 aa18.94■□□□□ 0.62
HTATSF1-204ENST00000535601 ARHGEF4Q9NR80 690 aa18.94■□□□□ 0.62
HTATSF1-204ENST00000535601 DAB1O75553 588 aa18.94■□□□□ 0.62
HTATSF1-204ENST00000535601 VAV1P15498 845 aa18.94■□□□□ 0.62
HTATSF1-204ENST00000535601 ELK3P41970 407 aa18.94■□□□□ 0.62
HTATSF1-204ENST00000535601 ZNF473Q8WTR7 871 aaKnown RBP18.94■□□□□ 0.62
HTATSF1-204ENST00000535601 C12orf65Q9H3J6 166 aaKnown RBP18.94■□□□□ 0.62
HTATSF1-204ENST00000535601 ETNK1Q9HBU6 452 aa18.94■□□□□ 0.62
HTATSF1-204ENST00000535601 PKN2Q16513 984 aaKnown RBP18.93■□□□□ 0.62
HTATSF1-204ENST00000535601 TCTN1Q2MV58 587 aa18.93■□□□□ 0.62
HTATSF1-204ENST00000535601 VSTM1Q6UX27 236 aa18.93■□□□□ 0.62
HTATSF1-204ENST00000535601 C3orf62Q6ZUJ4 267 aa18.93■□□□□ 0.62
HTATSF1-204ENST00000535601 SCN4BQ8IWT1 228 aa18.93■□□□□ 0.62
HTATSF1-204ENST00000535601 TMEM86AQ8N2M4 240 aa18.93■□□□□ 0.62
HTATSF1-204ENST00000535601 RNF139Q8WU17 664 aa18.93■□□□□ 0.62
HTATSF1-204ENST00000535601 CFAP36Q96G28 342 aa18.93■□□□□ 0.62
HTATSF1-204ENST00000535601 FAM129AQ9BZQ8 928 aa18.93■□□□□ 0.62
HTATSF1-204ENST00000535601 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.93■□□□□ 0.62
HTATSF1-204ENST00000535601 CDH9Q9ULB4 789 aa18.93■□□□□ 0.62
HTATSF1-204ENST00000535601 NOS2P35228 1153 aa18.93■□□□□ 0.62
HTATSF1-204ENST00000535601 ARPP19P56211 112 aa18.93■□□□□ 0.62
HTATSF1-204ENST00000535601 NKX3-2P78367 333 aa18.93■□□□□ 0.62
HTATSF1-204ENST00000535601 GRIK3Q13003 919 aa18.93■□□□□ 0.62
HTATSF1-204ENST00000535601 DENND5BQ6ZUT9 1274 aa18.93■□□□□ 0.62
HTATSF1-204ENST00000535601 BHLHA9Q7RTU4 235 aa18.93■□□□□ 0.62
HTATSF1-204ENST00000535601 C10orf67Q8IYJ2 551 aa18.93■□□□□ 0.62
HTATSF1-204ENST00000535601 TTC9BQ8N6N2 239 aa18.93■□□□□ 0.62
HTATSF1-204ENST00000535601 CCNYQ8ND76 341 aa18.93■□□□□ 0.62
HTATSF1-204ENST00000535601 SMARCD1Q96GM5 515 aa18.93■□□□□ 0.62
HTATSF1-204ENST00000535601 ABI2Q9NYB9 513 aaPredicted RBP18.93■□□□□ 0.62
HTATSF1-204ENST00000535601 RPL9P32969 192 aaKnown RBP18.92■□□□□ 0.62
HTATSF1-204ENST00000535601 ARL4CP56559 192 aa18.92■□□□□ 0.62
HTATSF1-204ENST00000535601 AP1B1Q10567 949 aa18.92■□□□□ 0.62
HTATSF1-204ENST00000535601 SLC39A12Q504Y0 691 aa18.92■□□□□ 0.62
HTATSF1-204ENST00000535601 INTS6LQ5JSJ4 861 aaKnown RBP18.92■□□□□ 0.62
HTATSF1-204ENST00000535601 EMC10Q5UCC4 262 aa18.92■□□□□ 0.62
HTATSF1-204ENST00000535601 BSPRYQ5W0U4 402 aa18.92■□□□□ 0.62
HTATSF1-204ENST00000535601 FBF1Q8TES7 1133 aa18.92■□□□□ 0.62
HTATSF1-204ENST00000535601 SCLYQ96I15 445 aa18.92■□□□□ 0.62
HTATSF1-204ENST00000535601 XPO6Q96QU8 1125 aaKnown RBP18.92■□□□□ 0.62
HTATSF1-204ENST00000535601 HMX1Q9NP08 348 aaPredicted RBP18.92■□□□□ 0.62
HTATSF1-204ENST00000535601 INTS9Q9NV88 658 aaKnown RBP18.92■□□□□ 0.62
HTATSF1-204ENST00000535601 USP3Q9Y6I4 520 aa18.92■□□□□ 0.62
HTATSF1-204ENST00000535601 A0A1W2PPM1 405 aa18.92■□□□□ 0.62
HTATSF1-204ENST00000535601 C9IYK1 514 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms