RNA–Protein interactions for RNA: ENST00000535493.5

HDAC4-214, Transcript of histone deacetylase 4, humanhuman

TSL 2

Gene HDAC4, Length 2,743 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-214ENST00000535493 N4BP2L1Q5TBK1 243 aaPredicted RBP13.86□□□□□ -0.19
HDAC4-214ENST00000535493 MEX3CQ5U5Q3 659 aaKnown RBP13.86□□□□□ -0.19
HDAC4-214ENST00000535493 FRMD7Q6ZUT3 714 aa13.86□□□□□ -0.19
HDAC4-214ENST00000535493 CYP4V2Q6ZWL3 525 aaPredicted RBP13.86□□□□□ -0.19
HDAC4-214ENST00000535493 BRSK2Q8IWQ3 736 aa13.86□□□□□ -0.19
HDAC4-214ENST00000535493 TNS4Q8IZW8 715 aa13.86□□□□□ -0.19
HDAC4-214ENST00000535493 C12orf29Q8N999 325 aa13.86□□□□□ -0.19
HDAC4-214ENST00000535493 RXFP2Q8WXD0 754 aa13.86□□□□□ -0.19
HDAC4-214ENST00000535493 AKT1S1Q96B36 256 aa13.86□□□□□ -0.19
HDAC4-214ENST00000535493 RNPEPQ9H4A4 650 aa13.86□□□□□ -0.19
HDAC4-214ENST00000535493 DMAP1Q9NPF5 467 aaPredicted RBP13.86□□□□□ -0.19
HDAC4-214ENST00000535493 PSAT1Q9Y617 370 aa13.86□□□□□ -0.19
HDAC4-214ENST00000535493 KIAA1217Q5T5P2 1943 aa13.86□□□□□ -0.19
HDAC4-214ENST00000535493 OATP04181 439 aa13.86□□□□□ -0.19
HDAC4-214ENST00000535493 SUPT20HL2P0C7V6 817 aa13.86□□□□□ -0.19
HDAC4-214ENST00000535493 ATP6V1B1P15313 513 aa13.86□□□□□ -0.19
HDAC4-214ENST00000535493 TFE3P19532 575 aaPredicted RBP13.86□□□□□ -0.19
HDAC4-214ENST00000535493 IL4RP24394 825 aa13.86□□□□□ -0.19
HDAC4-214ENST00000535493 NAMPTP43490 491 aa13.86□□□□□ -0.19
HDAC4-214ENST00000535493 INHBCP55103 352 aa13.86□□□□□ -0.19
HDAC4-214ENST00000535493 TUBB3Q13509 450 aa13.86□□□□□ -0.19
HDAC4-214ENST00000535493 SUPT20HL1Q3ZLR7 823 aa13.86□□□□□ -0.19
HDAC4-214ENST00000535493 OR6B2Q6IFH4 312 aa13.86□□□□□ -0.19
HDAC4-214ENST00000535493 TRIM50Q86XT4 487 aa13.86□□□□□ -0.19
HDAC4-214ENST00000535493 C10orf107Q8IVU9 208 aa13.86□□□□□ -0.19
HDAC4-214ENST00000535493 APLFQ8IW19 511 aaPredicted RBP13.86□□□□□ -0.19
HDAC4-214ENST00000535493 PQLC3Q8N755 202 aa13.86□□□□□ -0.19
HDAC4-214ENST00000535493 DHX33Q9H6R0 707 aaKnown RBP13.86□□□□□ -0.19
HDAC4-214ENST00000535493 E9PBE3 544 aa13.85□□□□□ -0.19
HDAC4-214ENST00000535493 FAM189A1O60320 539 aa13.85□□□□□ -0.19
HDAC4-214ENST00000535493 KLHL41O60662 606 aa13.85□□□□□ -0.19
HDAC4-214ENST00000535493 ARL2P36404 184 aa13.85□□□□□ -0.19
HDAC4-214ENST00000535493 SLC1A6P48664 564 aa13.85□□□□□ -0.19
HDAC4-214ENST00000535493 BCAR1P56945 870 aa13.85□□□□□ -0.19
HDAC4-214ENST00000535493 CNTN2Q02246 1040 aa13.85□□□□□ -0.19
HDAC4-214ENST00000535493 TAP1Q03518 808 aa13.85□□□□□ -0.19
HDAC4-214ENST00000535493 OLIG2Q13516 323 aa13.85□□□□□ -0.19
HDAC4-214ENST00000535493 TAZQ16635 292 aa13.85□□□□□ -0.19
HDAC4-214ENST00000535493 TBC1D25Q3MII6 688 aa13.85□□□□□ -0.19
HDAC4-214ENST00000535493 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.85□□□□□ -0.19
HDAC4-214ENST00000535493 RNF149Q8NC42 400 aa13.85□□□□□ -0.19
HDAC4-214ENST00000535493 PIWIL2Q8TC59 973 aaKnown RBP13.85□□□□□ -0.19
HDAC4-214ENST00000535493 GPRASP2Q96D09 838 aa13.85□□□□□ -0.19
HDAC4-214ENST00000535493 FAM192AQ9GZU8 254 aa13.85□□□□□ -0.19
HDAC4-214ENST00000535493 RSAD1Q9HA92 442 aa13.85□□□□□ -0.19
HDAC4-214ENST00000535493 DDX18Q9NVP1 670 aaKnown RBP13.85□□□□□ -0.19
HDAC4-214ENST00000535493 BTBD7Q9P203 1132 aa13.85□□□□□ -0.19
HDAC4-214ENST00000535493 CDH22Q9UJ99 828 aa13.85□□□□□ -0.19
HDAC4-214ENST00000535493 APOBEC2Q9Y235 224 aaKnown RBP13.85□□□□□ -0.19
HDAC4-214ENST00000535493 MFHAS1Q9Y4C4 1052 aa13.85□□□□□ -0.19
HDAC4-214ENST00000535493 WDR27A2RRH5 827 aa13.85□□□□□ -0.19
HDAC4-214ENST00000535493 WNT10BO00744 389 aa13.85□□□□□ -0.19
HDAC4-214ENST00000535493 IRF6O14896 467 aa13.85□□□□□ -0.19
HDAC4-214ENST00000535493 KRT38O76015 456 aa13.85□□□□□ -0.19
HDAC4-214ENST00000535493 MICAL2O94851 1124 aa13.85□□□□□ -0.19
HDAC4-214ENST00000535493 CXCL8P10145 99 aa13.85□□□□□ -0.19
HDAC4-214ENST00000535493 COPAP53621 1224 aa13.85□□□□□ -0.19
HDAC4-214ENST00000535493 GBE1Q04446 702 aa13.85□□□□□ -0.19
HDAC4-214ENST00000535493 TEDDM1Q5T9Z0 273 aa13.85□□□□□ -0.19
HDAC4-214ENST00000535493 TMCO4Q5TGY1 634 aa13.85□□□□□ -0.19
HDAC4-214ENST00000535493 WDR49Q8IV35 697 aa13.85□□□□□ -0.19
HDAC4-214ENST00000535493 WDR75Q8IWA0 830 aaKnown RBP13.85□□□□□ -0.19
HDAC4-214ENST00000535493 ST13P4Q8IZP2 240 aaPredicted RBP13.85□□□□□ -0.19
HDAC4-214ENST00000535493 ADAM32Q8TC27 787 aa13.85□□□□□ -0.19
HDAC4-214ENST00000535493 NSUN6Q8TEA1 469 aaKnown RBP13.85□□□□□ -0.19
HDAC4-214ENST00000535493 HEXIM2Q96MH2 286 aaKnown RBP13.85□□□□□ -0.19
HDAC4-214ENST00000535493 PHF12Q96QT6 1004 aa13.85□□□□□ -0.19
HDAC4-214ENST00000535493 CENPKQ9BS16 269 aa13.85□□□□□ -0.19
HDAC4-214ENST00000535493 ZNF518BQ9C0D4 1074 aa13.85□□□□□ -0.19
HDAC4-214ENST00000535493 ELOVL4Q9GZR5 314 aa13.85□□□□□ -0.19
HDAC4-214ENST00000535493 IFT122Q9HBG6 1241 aa13.85□□□□□ -0.19
HDAC4-214ENST00000535493 THAP1Q9NVV9 213 aa13.85□□□□□ -0.19
HDAC4-214ENST00000535493 EMCNQ9ULC0 261 aa13.85□□□□□ -0.19
HDAC4-214ENST00000535493 PCDHGC3Q9UN70 934 aa13.85□□□□□ -0.19
HDAC4-214ENST00000535493 POMPQ9Y244 141 aa13.85□□□□□ -0.19
HDAC4-214ENST00000535493 EFR3BQ9Y2G0 817 aa13.85□□□□□ -0.19
HDAC4-214ENST00000535493 GOLGA8QA0A0J9YX86 632 aa13.84□□□□□ -0.19
HDAC4-214ENST00000535493 GOLGA8OA6NCC3 632 aa13.84□□□□□ -0.19
HDAC4-214ENST00000535493 GOLGA8NF8WBI6 632 aa13.84□□□□□ -0.19
HDAC4-214ENST00000535493 TPP1O14773 563 aa13.84□□□□□ -0.19
HDAC4-214ENST00000535493 CHADO15335 359 aa13.84□□□□□ -0.19
HDAC4-214ENST00000535493 ALDOAP04075 364 aaKnown RBP13.84□□□□□ -0.19
HDAC4-214ENST00000535493 HOXC6P09630 235 aa13.84□□□□□ -0.19
HDAC4-214ENST00000535493 SESN2P58004 480 aaPredicted RBP13.84□□□□□ -0.19
HDAC4-214ENST00000535493 BTKQ06187 659 aa13.84□□□□□ -0.19
HDAC4-214ENST00000535493 PDK3Q15120 406 aa13.84□□□□□ -0.19
HDAC4-214ENST00000535493 SPATA24Q86W54 205 aa13.84□□□□□ -0.19
HDAC4-214ENST00000535493 PCDH19Q8TAB3 1148 aa13.84□□□□□ -0.19
HDAC4-214ENST00000535493 TRAPPC12Q8WVT3 735 aa13.84□□□□□ -0.19
HDAC4-214ENST00000535493 RNF157Q96PX1 679 aa13.84□□□□□ -0.19
HDAC4-214ENST00000535493 KLHL4Q9C0H6 718 aa13.84□□□□□ -0.19
HDAC4-214ENST00000535493 COL11A2P13942 1736 aaPredicted RBP13.84□□□□□ -0.19
HDAC4-214ENST00000535493 PRPSAP2O60256 369 aa13.84□□□□□ -0.19
HDAC4-214ENST00000535493 ADCY3O60266 1144 aa13.84□□□□□ -0.19
HDAC4-214ENST00000535493 MSCO60682 206 aa13.84□□□□□ -0.19
HDAC4-214ENST00000535493 FGF3P11487 239 aaPredicted RBP13.84□□□□□ -0.19
HDAC4-214ENST00000535493 PRKCHP24723 683 aa13.84□□□□□ -0.19
HDAC4-214ENST00000535493 LGSNQ5TDP6 509 aa13.84□□□□□ -0.19
HDAC4-214ENST00000535493 ZNF534Q76KX8 674 aa13.84□□□□□ -0.19
HDAC4-214ENST00000535493 SLC4A11Q8NBS3 891 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms