RNA–Protein interactions for RNA: ENST00000535452.5

CLSTN3-205, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-205ENST00000535452 PMLP29590 882 aa13.89□□□□□ -0.19
CLSTN3-205ENST00000535452 OXTRP30559 389 aa13.89□□□□□ -0.19
CLSTN3-205ENST00000535452 CORO1AP31146 461 aaKnown RBP13.89□□□□□ -0.19
CLSTN3-205ENST00000535452 BCAT1P54687 386 aa13.89□□□□□ -0.19
CLSTN3-205ENST00000535452 YWHAGP61981 247 aaKnown RBP eCLIP13.89□□□□□ -0.19
CLSTN3-205ENST00000535452 SHC2P98077 582 aa13.89□□□□□ -0.19
CLSTN3-205ENST00000535452 LRRC63Q05C16 580 aa13.89□□□□□ -0.19
CLSTN3-205ENST00000535452 PPP3CAQ08209 521 aa13.89□□□□□ -0.19
CLSTN3-205ENST00000535452 EIF4HQ15056 248 aaKnown RBP13.89□□□□□ -0.19
CLSTN3-205ENST00000535452 MAP7D1Q3KQU3 841 aa13.89□□□□□ -0.19
CLSTN3-205ENST00000535452 PPP1R26Q5T8A7 1209 aaPredicted RBP13.89□□□□□ -0.19
CLSTN3-205ENST00000535452 EGFLAMQ63HQ2 1017 aa13.89□□□□□ -0.19
CLSTN3-205ENST00000535452 SLC23A3Q6PIS1 610 aa13.89□□□□□ -0.19
CLSTN3-205ENST00000535452 ZNF276Q8N554 614 aa13.89□□□□□ -0.19
CLSTN3-205ENST00000535452 ANKRD52Q8NB46 1076 aa13.89□□□□□ -0.19
CLSTN3-205ENST00000535452 PRCCQ92733 491 aaPredicted RBP13.89□□□□□ -0.19
CLSTN3-205ENST00000535452 GSDMAQ96QA5 445 aa13.89□□□□□ -0.19
CLSTN3-205ENST00000535452 CIPCQ9C0C6 399 aa13.89□□□□□ -0.19
CLSTN3-205ENST00000535452 ARMCX3Q9UH62 379 aaPredicted RBP13.89□□□□□ -0.19
CLSTN3-205ENST00000535452 NUDT5Q9UKK9 219 aa13.89□□□□□ -0.19
CLSTN3-205ENST00000535452 KIAA1257Q9ULG3 409 aa13.89□□□□□ -0.19
CLSTN3-205ENST00000535452 ATXN2Q99700 1313 aaKnown RBP13.89□□□□□ -0.19
CLSTN3-205ENST00000535452 WDR87Q6ZQQ6 2873 aa13.88□□□□□ -0.19
CLSTN3-205ENST00000535452 FAM237AA0A1B0GTK4 181 aa13.88□□□□□ -0.19
CLSTN3-205ENST00000535452 PATE3B3GLJ2 98 aa13.88□□□□□ -0.19
CLSTN3-205ENST00000535452 MDM4O15151 490 aa13.88□□□□□ -0.19
CLSTN3-205ENST00000535452 STC2O76061 302 aa13.88□□□□□ -0.19
CLSTN3-205ENST00000535452 ZBED1O96006 694 aa13.88□□□□□ -0.19
CLSTN3-205ENST00000535452 SERPINF2P08697 491 aa13.88□□□□□ -0.19
CLSTN3-205ENST00000535452 GABRG2P18507 467 aa13.88□□□□□ -0.19
CLSTN3-205ENST00000535452 PTGER3P43115 390 aa13.88□□□□□ -0.19
CLSTN3-205ENST00000535452 TKTL1P51854 596 aa13.88□□□□□ -0.19
CLSTN3-205ENST00000535452 NUCB2P80303 420 aa13.88□□□□□ -0.19
CLSTN3-205ENST00000535452 GOLGA7BQ2TAP0 167 aa13.88□□□□□ -0.19
CLSTN3-205ENST00000535452 PLEKHG6Q3KR16 790 aa13.88□□□□□ -0.19
CLSTN3-205ENST00000535452 CCDC40Q4G0X9 1142 aa13.88□□□□□ -0.19
CLSTN3-205ENST00000535452 MPPE1Q53F39 396 aa13.88□□□□□ -0.19
CLSTN3-205ENST00000535452 ZNF658Q5TYW1 1059 aaPredicted RBP13.88□□□□□ -0.19
CLSTN3-205ENST00000535452 ARHGAP17Q68EM7 881 aa13.88□□□□□ -0.19
CLSTN3-205ENST00000535452 GPRIN1Q7Z2K8 1008 aa13.88□□□□□ -0.19
CLSTN3-205ENST00000535452 PIGZQ86VD9 579 aa13.88□□□□□ -0.19
CLSTN3-205ENST00000535452 DENND1CQ8IV53 801 aa13.88□□□□□ -0.19
CLSTN3-205ENST00000535452 PHTF2Q8N3S3 785 aa13.88□□□□□ -0.19
CLSTN3-205ENST00000535452 DEFB119Q8N690 84 aa13.88□□□□□ -0.19
CLSTN3-205ENST00000535452 TRIML1Q8N9V2 468 aa13.88□□□□□ -0.19
CLSTN3-205ENST00000535452 HSPA12BQ96MM6 686 aa13.88□□□□□ -0.19
CLSTN3-205ENST00000535452 TWNKQ96RR1 684 aa13.88□□□□□ -0.19
CLSTN3-205ENST00000535452 GABRG3Q99928 467 aa13.88□□□□□ -0.19
CLSTN3-205ENST00000535452 SLC2A11Q9BYW1 496 aa13.88□□□□□ -0.19
CLSTN3-205ENST00000535452 PRDM16Q9HAZ2 1276 aa13.88□□□□□ -0.19
CLSTN3-205ENST00000535452 APOBEC3GQ9HC16 384 aaKnown RBP13.88□□□□□ -0.19
CLSTN3-205ENST00000535452 CACNA2D2Q9NY47 1150 aa13.88□□□□□ -0.19
CLSTN3-205ENST00000535452 PLK2Q9NYY3 685 aa13.88□□□□□ -0.19
CLSTN3-205ENST00000535452 PILRBQ9UKJ0 227 aa13.88□□□□□ -0.19
CLSTN3-205ENST00000535452 PLA2G4CQ9UP65 541 aa13.88□□□□□ -0.19
CLSTN3-205ENST00000535452 MYH10P35580 1976 aa13.88□□□□□ -0.19
CLSTN3-205ENST00000535452 DMXL1Q9Y485 3027 aa13.88□□□□□ -0.19
CLSTN3-205ENST00000535452 NCOR2Q9Y618 2525 aa13.88□□□□□ -0.19
CLSTN3-205ENST00000535452 H0Y626 953 aa13.87□□□□□ -0.19
CLSTN3-205ENST00000535452 TM4SF5O14894 197 aa13.87□□□□□ -0.19
CLSTN3-205ENST00000535452 TRIM16O95361 564 aa13.87□□□□□ -0.19
CLSTN3-205ENST00000535452 SETSIPP0DME0 302 aa13.87□□□□□ -0.19
CLSTN3-205ENST00000535452 ITPKAP23677 461 aa13.87□□□□□ -0.19
CLSTN3-205ENST00000535452 CD6P30203 668 aa13.87□□□□□ -0.19
CLSTN3-205ENST00000535452 BST2Q10589 180 aaKnown RBP13.87□□□□□ -0.19
CLSTN3-205ENST00000535452 SFSWAPQ12872 951 aaKnown RBP13.87□□□□□ -0.19
CLSTN3-205ENST00000535452 CUL2Q13617 745 aa13.87□□□□□ -0.19
CLSTN3-205ENST00000535452 STILQ15468 1287 aa13.87□□□□□ -0.19
CLSTN3-205ENST00000535452 SERPINA13PQ6UXR4 307 aa13.87□□□□□ -0.19
CLSTN3-205ENST00000535452 SFTPA1Q8IWL2 248 aa13.87□□□□□ -0.19
CLSTN3-205ENST00000535452 DEFB124Q8NES8 71 aa13.87□□□□□ -0.19
CLSTN3-205ENST00000535452 DDX50Q9BQ39 737 aaKnown RBP13.87□□□□□ -0.19
CLSTN3-205ENST00000535452 NMUR1Q9HB89 426 aa13.87□□□□□ -0.19
CLSTN3-205ENST00000535452 TSPAN16Q9UKR8 245 aa13.87□□□□□ -0.19
CLSTN3-205ENST00000535452 USP3Q9Y6I4 520 aa13.87□□□□□ -0.19
CLSTN3-205ENST00000535452 STON1Q9Y6Q2 735 aa13.87□□□□□ -0.19
CLSTN3-205ENST00000535452 FRYLO94915 3013 aa13.87□□□□□ -0.19
CLSTN3-205ENST00000535452 SDK1Q7Z5N4 2213 aa13.86□□□□□ -0.19
CLSTN3-205ENST00000535452 THADAQ6YHU6 1953 aa13.86□□□□□ -0.19
CLSTN3-205ENST00000535452 BICDL2A1A5D9 508 aa13.86□□□□□ -0.19
CLSTN3-205ENST00000535452 XPO1O14980 1071 aaKnown RBP13.86□□□□□ -0.19
CLSTN3-205ENST00000535452 VDRP11473 427 aa13.86□□□□□ -0.19
CLSTN3-205ENST00000535452 HNRNPLP14866 589 aaKnown RBP eCLIP13.86□□□□□ -0.19
CLSTN3-205ENST00000535452 NDUFV2P19404 249 aa13.86□□□□□ -0.19
CLSTN3-205ENST00000535452 SLC11A2P49281 568 aa13.86□□□□□ -0.19
CLSTN3-205ENST00000535452 LRSAM1Q6UWE0 723 aa13.86□□□□□ -0.19
CLSTN3-205ENST00000535452 UNC45BQ8IWX7 931 aa13.86□□□□□ -0.19
CLSTN3-205ENST00000535452 CPXM2Q8N436 756 aa13.86□□□□□ -0.19
CLSTN3-205ENST00000535452 ENGASEQ8NFI3 743 aa13.86□□□□□ -0.19
CLSTN3-205ENST00000535452 WFIKKN2Q8TEU8 576 aa13.86□□□□□ -0.19
CLSTN3-205ENST00000535452 SIPA1Q96FS4 1042 aa13.86□□□□□ -0.19
CLSTN3-205ENST00000535452 NT5C1BQ96P26 610 aa13.86□□□□□ -0.19
CLSTN3-205ENST00000535452 TRIM62Q9BVG3 475 aa13.86□□□□□ -0.19
CLSTN3-205ENST00000535452 ZDHHC5Q9C0B5 715 aa13.86□□□□□ -0.19
CLSTN3-205ENST00000535452 MIR1-1HGQ9H1L0 117 aa13.86□□□□□ -0.19
CLSTN3-205ENST00000535452 ABCC13Q9NSE7 274 aa13.86□□□□□ -0.19
CLSTN3-205ENST00000535452 OSER1Q9NX31 292 aa13.86□□□□□ -0.19
CLSTN3-205ENST00000535452 SLC27A6Q9Y2P4 619 aa13.86□□□□□ -0.19
CLSTN3-205ENST00000535452 HBS1LQ9Y450 684 aaKnown RBP13.86□□□□□ -0.19
CLSTN3-205ENST00000535452 RAD54BQ9Y620 910 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms