RNA–Protein interactions for RNA: ENST00000534947.5

COPS7A-204, Transcript of COP9 signalosome subunit 7A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS7A, Length 2,034 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-204ENST00000534947 CNTFP26441 200 aa19.44■□□□□ 0.7
COPS7A-204ENST00000534947 TARSP26639 723 aaKnown RBP19.44■□□□□ 0.7
COPS7A-204ENST00000534947 PTPN4P29074 926 aa19.44■□□□□ 0.7
COPS7A-204ENST00000534947 FDFT1P37268 417 aa19.44■□□□□ 0.7
COPS7A-204ENST00000534947 CDK18Q07002 472 aa19.44■□□□□ 0.7
COPS7A-204ENST00000534947 XKR4Q5GH76 650 aa19.44■□□□□ 0.7
COPS7A-204ENST00000534947 DPP9Q86TI2 863 aa19.44■□□□□ 0.7
COPS7A-204ENST00000534947 CTAGE3PQ8IX95 158 aa19.44■□□□□ 0.7
COPS7A-204ENST00000534947 CCDC110Q8TBZ0 833 aa19.44■□□□□ 0.7
COPS7A-204ENST00000534947 KBTBD7Q8WVZ9 684 aa19.44■□□□□ 0.7
COPS7A-204ENST00000534947 CSPG4P5Q96PW8 444 aa19.44■□□□□ 0.7
COPS7A-204ENST00000534947 FAM111AQ96PZ2 611 aa19.44■□□□□ 0.7
COPS7A-204ENST00000534947 SRPK1Q96SB4 655 aaKnown RBP19.44■□□□□ 0.7
COPS7A-204ENST00000534947 TINF2Q9BSI4 451 aa19.44■□□□□ 0.7
COPS7A-204ENST00000534947 EIF2AQ9BY44 585 aaKnown RBP19.44■□□□□ 0.7
COPS7A-204ENST00000534947 DHX35Q9H5Z1 703 aaKnown RBP19.44■□□□□ 0.7
COPS7A-204ENST00000534947 PLAC1Q9HBJ0 212 aa19.44■□□□□ 0.7
COPS7A-204ENST00000534947 SETD4Q9NVD3 440 aa19.44■□□□□ 0.7
COPS7A-204ENST00000534947 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP19.44■□□□□ 0.7
COPS7A-204ENST00000534947 HAO1Q9UJM8 370 aa19.44■□□□□ 0.7
COPS7A-204ENST00000534947 EPB41L3Q9Y2J2 1087 aaPredicted RBP19.44■□□□□ 0.7
COPS7A-204ENST00000534947 SF3B1O75533 1304 aaKnown RBP eCLIP19.44■□□□□ 0.78e-6■■■■■ 107
COPS7A-204ENST00000534947 WDR91A4D1P6 747 aa19.44■□□□□ 0.7
COPS7A-204ENST00000534947 HGSO14964 777 aaPredicted RBP19.44■□□□□ 0.7
COPS7A-204ENST00000534947 GNL1P36915 607 aaPredicted RBP19.44■□□□□ 0.7
COPS7A-204ENST00000534947 GTF2A2P52657 109 aa19.44■□□□□ 0.7
COPS7A-204ENST00000534947 DBN1Q16643 649 aa19.44■□□□□ 0.7
COPS7A-204ENST00000534947 CTC1Q2NKJ3 1217 aa19.44■□□□□ 0.7
COPS7A-204ENST00000534947 TAF1BQ53T94 588 aaPredicted RBP19.44■□□□□ 0.7
COPS7A-204ENST00000534947 PLEKHG4Q58EX7 1191 aa19.44■□□□□ 0.7
COPS7A-204ENST00000534947 FAM91A1Q658Y4 838 aa19.44■□□□□ 0.7
COPS7A-204ENST00000534947 ANKRD23Q86SG2 305 aa19.44■□□□□ 0.7
COPS7A-204ENST00000534947 PTPRN2Q92932 1015 aa19.44■□□□□ 0.7
COPS7A-204ENST00000534947 C18orf25Q96B23 403 aaPredicted RBP19.44■□□□□ 0.7
COPS7A-204ENST00000534947 ANKRD27Q96NW4 1050 aa19.44■□□□□ 0.7
COPS7A-204ENST00000534947 TRIM6Q9C030 488 aaPredicted RBP19.44■□□□□ 0.7
COPS7A-204ENST00000534947 PLLPQ9Y342 182 aa19.44■□□□□ 0.7
COPS7A-204ENST00000534947 KPNA7A9QM74 516 aa19.43■□□□□ 0.7
COPS7A-204ENST00000534947 FAM163BP0C2L3 166 aa19.43■□□□□ 0.7
COPS7A-204ENST00000534947 CCNG1P51959 295 aa19.43■□□□□ 0.7
COPS7A-204ENST00000534947 HEATR6Q6AI08 1181 aaKnown RBP19.43■□□□□ 0.7
COPS7A-204ENST00000534947 KCNT2Q6UVM3 1135 aa19.43■□□□□ 0.7
COPS7A-204ENST00000534947 UNC5AQ6ZN44 842 aa19.43■□□□□ 0.7
COPS7A-204ENST00000534947 TIFABQ6ZNK6 161 aa19.43■□□□□ 0.7
COPS7A-204ENST00000534947 ZNF534Q76KX8 674 aa19.43■□□□□ 0.7
COPS7A-204ENST00000534947 GPR142Q7Z601 462 aa19.43■□□□□ 0.7
COPS7A-204ENST00000534947 MS4A4AQ96JQ5 239 aa19.43■□□□□ 0.7
COPS7A-204ENST00000534947 TNIP3Q96KP6 325 aa19.43■□□□□ 0.7
COPS7A-204ENST00000534947 OLFM3Q96PB7 478 aa19.43■□□□□ 0.7
COPS7A-204ENST00000534947 CXCL16Q9H2A7 254 aa19.43■□□□□ 0.7
COPS7A-204ENST00000534947 SNX25Q9H3E2 840 aa19.43■□□□□ 0.7
COPS7A-204ENST00000534947 DPEP3Q9H4B8 488 aa19.43■□□□□ 0.7
COPS7A-204ENST00000534947 EIF2B3Q9NR50 452 aaKnown RBP19.43■□□□□ 0.7
COPS7A-204ENST00000534947 KANSL3Q9P2N6 904 aa19.43■□□□□ 0.7
COPS7A-204ENST00000534947 PCDHA11Q9Y5I1 949 aa19.43■□□□□ 0.7
COPS7A-204ENST00000534947 USP3Q9Y6I4 520 aa19.43■□□□□ 0.7
COPS7A-204ENST00000534947 XPO1O14980 1071 aaKnown RBP19.42■□□□□ 0.7
COPS7A-204ENST00000534947 DGKIO75912 1065 aa19.42■□□□□ 0.7
COPS7A-204ENST00000534947 F2P00734 622 aa19.42■□□□□ 0.7
COPS7A-204ENST00000534947 ARL4AP40617 200 aa19.42■□□□□ 0.7
COPS7A-204ENST00000534947 MATKP42679 507 aa19.42■□□□□ 0.7
COPS7A-204ENST00000534947 ARFIP2P53365 341 aa19.42■□□□□ 0.7
COPS7A-204ENST00000534947 GBE1Q04446 702 aa19.42■□□□□ 0.7
COPS7A-204ENST00000534947 SLC10A2Q12908 348 aaPredicted RBP19.42■□□□□ 0.7
COPS7A-204ENST00000534947 SV2CQ496J9 727 aa19.42■□□□□ 0.7
COPS7A-204ENST00000534947 STEAP4Q687X5 459 aa19.42■□□□□ 0.7
COPS7A-204ENST00000534947 MTDHQ86UE4 582 aaKnown RBP19.42■□□□□ 0.7
COPS7A-204ENST00000534947 CFAP61Q8NHU2 1237 aa19.42■□□□□ 0.7
COPS7A-204ENST00000534947 GIMAP7Q8NHV1 300 aa19.42■□□□□ 0.7
COPS7A-204ENST00000534947 C7orf26Q96N11 449 aa19.42■□□□□ 0.7
COPS7A-204ENST00000534947 KCTD15Q96SI1 283 aaPredicted RBP19.42■□□□□ 0.7
COPS7A-204ENST00000534947 FERMT1Q9BQL6 677 aa19.42■□□□□ 0.7
COPS7A-204ENST00000534947 C15orf41Q9Y2V0 281 aa19.42■□□□□ 0.7
COPS7A-204ENST00000534947 METTL18O95568 372 aa19.42■□□□□ 0.7
COPS7A-204ENST00000534947 ANP32DO95626 131 aa19.42■□□□□ 0.7
COPS7A-204ENST00000534947 DLDP09622 509 aaKnown RBP19.42■□□□□ 0.7
COPS7A-204ENST00000534947 TFE3P19532 575 aaPredicted RBP19.42■□□□□ 0.7
COPS7A-204ENST00000534947 TAF6P49848 677 aa19.42■□□□□ 0.7
COPS7A-204ENST00000534947 WASHC2DQ5SRD0 308 aa19.42■□□□□ 0.7
COPS7A-204ENST00000534947 FAXCQ5TGI0 409 aa19.42■□□□□ 0.7
COPS7A-204ENST00000534947 ATG16L1Q676U5 607 aa19.42■□□□□ 0.7
COPS7A-204ENST00000534947 TLDC1Q6P9B6 456 aa19.42■□□□□ 0.7
COPS7A-204ENST00000534947 CCNJLQ8IV13 435 aa19.42■□□□□ 0.7
COPS7A-204ENST00000534947 C7orf31Q8N865 590 aa19.42■□□□□ 0.7
COPS7A-204ENST00000534947 APPL2Q8NEU8 664 aa19.42■□□□□ 0.7
COPS7A-204ENST00000534947 RFWD2Q8NHY2 731 aa19.42■□□□□ 0.7
COPS7A-204ENST00000534947 TFB1MQ8WVM0 346 aaKnown RBP19.42■□□□□ 0.7
COPS7A-204ENST00000534947 TTC17Q96AE7 1141 aa19.42■□□□□ 0.7
COPS7A-204ENST00000534947 TBC1D10AQ9BXI6 508 aa19.42■□□□□ 0.7
COPS7A-204ENST00000534947 FAM49AQ9H0Q0 323 aaPredicted RBP19.42■□□□□ 0.7
COPS7A-204ENST00000534947 NXF3Q9H4D5 531 aaKnown RBP19.42■□□□□ 0.7
COPS7A-204ENST00000534947 DTLQ9NZJ0 730 aa19.42■□□□□ 0.7
COPS7A-204ENST00000534947 A0A0A0MRY4 1105 aa19.41■□□□□ 0.7
COPS7A-204ENST00000534947 CXorf49A8MYA2 514 aaPredicted RBP19.41■□□□□ 0.7
COPS7A-204ENST00000534947 BTBD19C9JJ37 291 aa19.41■□□□□ 0.7
COPS7A-204ENST00000534947 E7ENQ6 273 aa19.41■□□□□ 0.7
COPS7A-204ENST00000534947 RFPL1O75677 317 aa19.41■□□□□ 0.7
COPS7A-204ENST00000534947 ATP5BP06576 529 aaKnown RBP19.41■□□□□ 0.7
COPS7A-204ENST00000534947 SMIM10L2AP0DMW4 78 aa19.41■□□□□ 0.7
COPS7A-204ENST00000534947 SMIM10L2BP0DMW5 78 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms