RNA–Protein interactions for RNA: ENST00000534765.1

SF3B2-216, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-216ENST00000534765 CYP4F11Q9HBI6 524 aa9.37□□□□□ -0.91
SF3B2-216ENST00000534765 DDX56Q9NY93 547 aaKnown RBP9.37□□□□□ -0.91
SF3B2-216ENST00000534765 CYP1A1P04798 512 aaPredicted RBP9.36□□□□□ -0.91
SF3B2-216ENST00000534765 PAEPP09466 180 aa9.36□□□□□ -0.91
SF3B2-216ENST00000534765 GJC1P36383 396 aa9.36□□□□□ -0.91
SF3B2-216ENST00000534765 TFAMQ00059 246 aaKnown RBP9.36□□□□□ -0.91
SF3B2-216ENST00000534765 ASPHQ12797 758 aa9.36□□□□□ -0.91
SF3B2-216ENST00000534765 ACSBG2Q5FVE4 666 aa9.36□□□□□ -0.91
SF3B2-216ENST00000534765 MPZL3Q6UWV2 235 aa9.36□□□□□ -0.91
SF3B2-216ENST00000534765 SLC15A3Q8IY34 581 aa9.36□□□□□ -0.91
SF3B2-216ENST00000534765 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.36□□□□□ -0.91
SF3B2-216ENST00000534765 UTP4Q969X6 686 aaKnown RBP9.36□□□□□ -0.91
SF3B2-216ENST00000534765 THAP11Q96EK4 314 aa9.36□□□□□ -0.91
SF3B2-216ENST00000534765 MRPL4Q9BYD3 311 aaKnown RBP9.36□□□□□ -0.91
SF3B2-216ENST00000534765 ATAD3AQ9NVI7 634 aa9.36□□□□□ -0.91
SF3B2-216ENST00000534765 PHTF1Q9UMS5 762 aa9.36□□□□□ -0.91
SF3B2-216ENST00000534765 TMEM221A6NGB7 291 aa9.36□□□□□ -0.91
SF3B2-216ENST00000534765 GABBR2O75899 941 aa9.36□□□□□ -0.91
SF3B2-216ENST00000534765 KRT5P13647 590 aa9.36□□□□□ -0.91
SF3B2-216ENST00000534765 PRLRP16471 622 aa9.36□□□□□ -0.91
SF3B2-216ENST00000534765 TNFRSF8P28908 595 aa9.36□□□□□ -0.91
SF3B2-216ENST00000534765 FLT3LGP49771 235 aa9.36□□□□□ -0.91
SF3B2-216ENST00000534765 RABGGTBP53611 331 aa9.36□□□□□ -0.91
SF3B2-216ENST00000534765 ATXN3P54252 364 aaPredicted RBP9.36□□□□□ -0.91
SF3B2-216ENST00000534765 PURAQ00577 322 aaKnown RBP9.36□□□□□ -0.91
SF3B2-216ENST00000534765 SOX4Q06945 474 aaPredicted RBP9.36□□□□□ -0.91
SF3B2-216ENST00000534765 CUL2Q13617 745 aa9.36□□□□□ -0.91
SF3B2-216ENST00000534765 BTG3Q14201 252 aaPredicted RBP9.36□□□□□ -0.91
SF3B2-216ENST00000534765 TXNRD3NBQ6F5E7 133 aa9.36□□□□□ -0.91
SF3B2-216ENST00000534765 ZPBP2Q6X784 338 aa9.36□□□□□ -0.91
SF3B2-216ENST00000534765 NLRP7Q8WX94 980 aa9.36□□□□□ -0.91
SF3B2-216ENST00000534765 RNF25Q96BH1 459 aaPredicted RBP9.36□□□□□ -0.91
SF3B2-216ENST00000534765 SH3GL1Q99961 368 aa9.36□□□□□ -0.91
SF3B2-216ENST00000534765 CYLDQ9NQC7 956 aa9.36□□□□□ -0.91
SF3B2-216ENST00000534765 KLK14Q9P0G3 267 aa9.36□□□□□ -0.91
SF3B2-216ENST00000534765 TMED5Q9Y3A6 229 aa9.36□□□□□ -0.91
SF3B2-216ENST00000534765 RALGAPA2Q2PPJ7 1873 aa9.36□□□□□ -0.91
SF3B2-216ENST00000534765 NCANO14594 1321 aa9.36□□□□□ -0.91
SF3B2-216ENST00000534765 B2RBV5 119 aa9.36□□□□□ -0.91
SF3B2-216ENST00000534765 PIK3R2O00459 728 aa9.36□□□□□ -0.91
SF3B2-216ENST00000534765 OGTO15294 1046 aa9.36□□□□□ -0.91
SF3B2-216ENST00000534765 CCDC22O60826 627 aa9.36□□□□□ -0.91
SF3B2-216ENST00000534765 NOL3O60936 208 aaKnown RBP9.36□□□□□ -0.91
SF3B2-216ENST00000534765 ASS1P00966 412 aaKnown RBP9.36□□□□□ -0.91
SF3B2-216ENST00000534765 RRM1P23921 792 aa9.36□□□□□ -0.91
SF3B2-216ENST00000534765 PTPN4P29074 926 aa9.36□□□□□ -0.91
SF3B2-216ENST00000534765 ZNF132P52740 706 aa9.36□□□□□ -0.91
SF3B2-216ENST00000534765 OGDHQ02218 1023 aa9.36□□□□□ -0.91
SF3B2-216ENST00000534765 CACNB2Q08289 660 aaPredicted RBP9.36□□□□□ -0.91
SF3B2-216ENST00000534765 MXD4Q14582 209 aaPredicted RBP9.36□□□□□ -0.91
SF3B2-216ENST00000534765 KLHL35Q6PF15 583 aa9.36□□□□□ -0.91
SF3B2-216ENST00000534765 NLRP9Q7RTR0 991 aa9.36□□□□□ -0.91
SF3B2-216ENST00000534765 GCNAQ96QF7 691 aa9.36□□□□□ -0.91
SF3B2-216ENST00000534765 PRPF18Q99633 342 aaKnown RBP9.36□□□□□ -0.91
SF3B2-216ENST00000534765 EBF3Q9H4W6 596 aa9.36□□□□□ -0.91
SF3B2-216ENST00000534765 SNTG2Q9NY99 539 aa9.36□□□□□ -0.91
SF3B2-216ENST00000534765 HBS1LQ9Y450 684 aaKnown RBP9.36□□□□□ -0.91
SF3B2-216ENST00000534765 MBLAC1A4D2B0 266 aaPredicted RBP9.35□□□□□ -0.91
SF3B2-216ENST00000534765 NDC80O14777 642 aa9.35□□□□□ -0.91
SF3B2-216ENST00000534765 WFS1O76024 890 aa9.35□□□□□ -0.91
SF3B2-216ENST00000534765 CYBAP13498 195 aa9.35□□□□□ -0.91
SF3B2-216ENST00000534765 MMP13P45452 471 aa9.35□□□□□ -0.91
SF3B2-216ENST00000534765 KCNJ1P48048 391 aa9.35□□□□□ -0.91
SF3B2-216ENST00000534765 TM4SF4P48230 202 aa9.35□□□□□ -0.91
SF3B2-216ENST00000534765 GDF6Q6KF10 455 aaPredicted RBP9.35□□□□□ -0.91
SF3B2-216ENST00000534765 PEX5LQ8IYB4 626 aa9.35□□□□□ -0.91
SF3B2-216ENST00000534765 TAB3Q8N5C8 712 aaPredicted RBP9.35□□□□□ -0.91
SF3B2-216ENST00000534765 HES6Q96HZ4 224 aa9.35□□□□□ -0.91
SF3B2-216ENST00000534765 ARMCX1Q9P291 453 aa9.35□□□□□ -0.91
SF3B2-216ENST00000534765 HEMK1Q9Y5R4 338 aaPredicted RBP9.35□□□□□ -0.91
SF3B2-216ENST00000534765 MYOCOSA0A1B0GUC4 107 aa9.35□□□□□ -0.91
SF3B2-216ENST00000534765 F8W810 466 aa9.35□□□□□ -0.91
SF3B2-216ENST00000534765 H0YGN5 161 aa9.35□□□□□ -0.91
SF3B2-216ENST00000534765 ITGB3P05106 788 aa9.35□□□□□ -0.91
SF3B2-216ENST00000534765 MAPK10P53779 464 aa9.35□□□□□ -0.91
SF3B2-216ENST00000534765 SNRPFP62306 86 aaKnown RBP9.35□□□□□ -0.91
SF3B2-216ENST00000534765 RPL7AP62424 266 aaKnown RBP9.35□□□□□ -0.91
SF3B2-216ENST00000534765 LPIN1Q14693 890 aa9.35□□□□□ -0.91
SF3B2-216ENST00000534765 MFSD10Q14728 455 aa9.35□□□□□ -0.91
SF3B2-216ENST00000534765 CARTPTQ16568 116 aa9.35□□□□□ -0.91
SF3B2-216ENST00000534765 DGKDQ16760 1214 aa9.35□□□□□ -0.91
SF3B2-216ENST00000534765 ATP13A4Q4VNC1 1196 aa9.35□□□□□ -0.91
SF3B2-216ENST00000534765 UBXN11Q5T124 520 aa9.35□□□□□ -0.91
SF3B2-216ENST00000534765 LPCAT4Q643R3 524 aa9.35□□□□□ -0.91
SF3B2-216ENST00000534765 IQSEC1Q6DN90 963 aa9.35□□□□□ -0.91
SF3B2-216ENST00000534765 CROCCP2Q86T23 111 aa9.35□□□□□ -0.91
SF3B2-216ENST00000534765 HEATR4Q86WZ0 1026 aa9.35□□□□□ -0.91
SF3B2-216ENST00000534765 C12orf29Q8N999 325 aa9.35□□□□□ -0.91
SF3B2-216ENST00000534765 PYDC1Q8WXC3 89 aa9.35□□□□□ -0.91
SF3B2-216ENST00000534765 SHCBP1LQ9BZQ2 653 aa9.35□□□□□ -0.91
SF3B2-216ENST00000534765 SPO11Q9Y5K1 396 aa9.35□□□□□ -0.91
SF3B2-216ENST00000534765 NFS1Q9Y697 457 aa9.35□□□□□ -0.91
SF3B2-216ENST00000534765 FRMPD3Q5JV73 1810 aa9.35□□□□□ -0.91
SF3B2-216ENST00000534765 CCDC188H7C350 402 aa9.35□□□□□ -0.91
SF3B2-216ENST00000534765 GAS8O95995 478 aa9.35□□□□□ -0.91
SF3B2-216ENST00000534765 MYL3P08590 195 aa9.35□□□□□ -0.91
SF3B2-216ENST00000534765 PDGFRBP09619 1106 aa9.35□□□□□ -0.91
SF3B2-216ENST00000534765 HSPA8P11142 646 aaKnown RBP9.35□□□□□ -0.91
SF3B2-216ENST00000534765 ICA1LQ8NDH6 482 aa9.35□□□□□ -0.91
SF3B2-216ENST00000534765 CAPSLQ8WWF8 208 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms