RNA–Protein interactions for RNA: ENST00000534336.1

MALAT1-202, metastasis associated lung adenocarcinoma transcript 1, humanhuman

BASIC

Gene MALAT1, Length 8,708 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MALAT1-202ENST00000534336 MED11Q9P086 117 aa9.49□□□□□ -0.89
MALAT1-202ENST00000534336 PYCARDQ9ULZ3 195 aa9.49□□□□□ -0.89
MALAT1-202ENST00000534336 NR5A2O00482 541 aa9.49□□□□□ -0.89
MALAT1-202ENST00000534336 PEX3P56589 373 aa9.49□□□□□ -0.89
MALAT1-202ENST00000534336 GEMIN4P57678 1058 aaKnown RBP9.49□□□□□ -0.89
MALAT1-202ENST00000534336 CDKL1Q00532 357 aa9.49□□□□□ -0.89
MALAT1-202ENST00000534336 DPCR1Q3MIW9 517 aa9.49□□□□□ -0.89
MALAT1-202ENST00000534336 PLCZ1Q86YW0 608 aa9.49□□□□□ -0.89
MALAT1-202ENST00000534336 NEDD1Q8NHV4 660 aa9.49□□□□□ -0.89
MALAT1-202ENST00000534336 SLC7A14Q8TBB6 771 aa9.49□□□□□ -0.89
MALAT1-202ENST00000534336 SPATA18Q8TC71 538 aa9.49□□□□□ -0.89
MALAT1-202ENST00000534336 GPT2Q8TD30 523 aa9.49□□□□□ -0.89
MALAT1-202ENST00000534336 E2F7Q96AV8 911 aa9.49□□□□□ -0.89
MALAT1-202ENST00000534336 C8orf37Q96NL8 207 aa9.49□□□□□ -0.89
MALAT1-202ENST00000534336 CYP3A43Q9HB55 503 aa9.49□□□□□ -0.89
MALAT1-202ENST00000534336 SNX6Q9UNH7 406 aa9.49□□□□□ -0.89
MALAT1-202ENST00000534336 POLR3AO14802 1390 aaPredicted RBP9.49□□□□□ -0.89
MALAT1-202ENST00000534336 NUAK1O60285 661 aa9.49□□□□□ -0.89
MALAT1-202ENST00000534336 PLCL1Q15111 1095 aa9.49□□□□□ -0.89
MALAT1-202ENST00000534336 SLFN13Q68D06 897 aa9.49□□□□□ -0.89
MALAT1-202ENST00000534336 GPRASP2Q96D09 838 aa9.49□□□□□ -0.89
MALAT1-202ENST00000534336 MAGEB18Q96M61 343 aa9.49□□□□□ -0.89
MALAT1-202ENST00000534336 RBM15Q96T37 977 aaKnown RBP eCLIP9.49□□□□□ -0.89not detected■□□□□ 10.5
MALAT1-202ENST00000534336 KCNN2Q9H2S1 579 aa9.49□□□□□ -0.89
MALAT1-202ENST00000534336 NECTIN3Q9NQS3 549 aa9.49□□□□□ -0.89
MALAT1-202ENST00000534336 LRRC4BQ9NT99 713 aa9.49□□□□□ -0.89
MALAT1-202ENST00000534336 INVSQ9Y283 1065 aa9.49□□□□□ -0.89
MALAT1-202ENST00000534336 A0A088AWK7 358 aa9.49□□□□□ -0.89
MALAT1-202ENST00000534336 AKAP8O43823 692 aaKnown RBP9.49□□□□□ -0.89
MALAT1-202ENST00000534336 ZNF10P21506 573 aaPredicted RBP9.49□□□□□ -0.89
MALAT1-202ENST00000534336 SLC26A3P40879 764 aa9.49□□□□□ -0.89
MALAT1-202ENST00000534336 ATP2C1P98194 919 aaPredicted RBP9.49□□□□□ -0.89
MALAT1-202ENST00000534336 PCSK7Q16549 785 aa9.49□□□□□ -0.89
MALAT1-202ENST00000534336 PPM1LQ5SGD2 360 aa9.49□□□□□ -0.89
MALAT1-202ENST00000534336 HLA-DQA1Q5Y7H0 255 aa9.49□□□□□ -0.89
MALAT1-202ENST00000534336 KDELC2Q7Z4H8 507 aa9.49□□□□□ -0.89
MALAT1-202ENST00000534336 PCDH19Q8TAB3 1148 aa9.49□□□□□ -0.89
MALAT1-202ENST00000534336 SLC40A1Q9NP59 571 aa9.49□□□□□ -0.89
MALAT1-202ENST00000534336 TIMMDC1Q9NPL8 285 aa9.49□□□□□ -0.89
MALAT1-202ENST00000534336 SRP68Q9UHB9 627 aaKnown RBP9.49□□□□□ -0.89
MALAT1-202ENST00000534336 CHKBQ9Y259 395 aa9.49□□□□□ -0.89
MALAT1-202ENST00000534336 FLT4P35916 1363 aa9.49□□□□□ -0.89
MALAT1-202ENST00000534336 DOCK7Q96N67 2140 aa9.49□□□□□ -0.89
MALAT1-202ENST00000534336 CASC3O15234 703 aaKnown RBP9.49□□□□□ -0.89
MALAT1-202ENST00000534336 CDH4P55283 916 aa9.49□□□□□ -0.89
MALAT1-202ENST00000534336 HUNKP57058 714 aa9.49□□□□□ -0.89
MALAT1-202ENST00000534336 GCKRQ14397 625 aa9.49□□□□□ -0.89
MALAT1-202ENST00000534336 RELL1Q8IUW5 271 aa9.49□□□□□ -0.89
MALAT1-202ENST00000534336 C10orf107Q8IVU9 208 aa9.49□□□□□ -0.89
MALAT1-202ENST00000534336 FAM20CQ8IXL6 584 aa9.49□□□□□ -0.89
MALAT1-202ENST00000534336 IFNL3Q8IZI9 196 aa9.49□□□□□ -0.89
MALAT1-202ENST00000534336 RNPC3Q96LT9 517 aaKnown RBP9.49□□□□□ -0.89
MALAT1-202ENST00000534336 EMILIN2Q9BXX0 1053 aa9.49□□□□□ -0.89
MALAT1-202ENST00000534336 DDX18Q9NVP1 670 aaKnown RBP9.49□□□□□ -0.89
MALAT1-202ENST00000534336 ZNF214Q9UL59 606 aaPredicted RBP9.49□□□□□ -0.89
MALAT1-202ENST00000534336 UBQLN1Q9UMX0 589 aaKnown RBP9.49□□□□□ -0.89
MALAT1-202ENST00000534336 LRCH1Q9Y2L9 728 aa9.49□□□□□ -0.89
MALAT1-202ENST00000534336 PLIN3O60664 434 aa9.49□□□□□ -0.89
MALAT1-202ENST00000534336 VPS4BO75351 444 aa9.49□□□□□ -0.89
MALAT1-202ENST00000534336 MYL3P08590 195 aa9.49□□□□□ -0.89
MALAT1-202ENST00000534336 CPA3P15088 417 aa9.49□□□□□ -0.89
MALAT1-202ENST00000534336 CHRM3P20309 590 aa9.49□□□□□ -0.89
MALAT1-202ENST00000534336 CLK3P49761 638 aaKnown RBP9.49□□□□□ -0.89
MALAT1-202ENST00000534336 TMBIM6P55061 237 aa9.49□□□□□ -0.89
MALAT1-202ENST00000534336 PHACTR4Q8IZ21 702 aa9.49□□□□□ -0.89
MALAT1-202ENST00000534336 B3GALNT2Q8NCR0 500 aa9.49□□□□□ -0.89
MALAT1-202ENST00000534336 TFB1MQ8WVM0 346 aaKnown RBP9.49□□□□□ -0.89
MALAT1-202ENST00000534336 AGAP3Q96P47 875 aa9.49□□□□□ -0.89
MALAT1-202ENST00000534336 PRDM8Q9NQV8 689 aa9.49□□□□□ -0.89
MALAT1-202ENST00000534336 GGA3Q9NZ52 723 aa9.49□□□□□ -0.89
MALAT1-202ENST00000534336 PCSK1NQ9UHG2 260 aa9.49□□□□□ -0.89
MALAT1-202ENST00000534336 VPS51Q9UID3 782 aa9.49□□□□□ -0.89
MALAT1-202ENST00000534336 ABCC4O15439 1325 aa9.49□□□□□ -0.89
MALAT1-202ENST00000534336 TFE3P19532 575 aaPredicted RBP9.49□□□□□ -0.89
MALAT1-202ENST00000534336 COPZ1P61923 177 aa9.49□□□□□ -0.89
MALAT1-202ENST00000534336 SKIV2LQ15477 1246 aaKnown RBP9.49□□□□□ -0.89
MALAT1-202ENST00000534336 TAF5Q15542 800 aa9.49□□□□□ -0.89
MALAT1-202ENST00000534336 FAM76BQ5HYJ3 339 aa9.49□□□□□ -0.89
MALAT1-202ENST00000534336 ZNF350Q9GZX5 532 aa9.49□□□□□ -0.89
MALAT1-202ENST00000534336 ADPRHL2Q9NX46 363 aa9.49□□□□□ -0.89
MALAT1-202ENST00000534336 CES2O00748 559 aa9.48□□□□□ -0.89
MALAT1-202ENST00000534336 PGRMC2O15173 223 aa9.48□□□□□ -0.89
MALAT1-202ENST00000534336 RAP1GAPP47736 663 aa9.48□□□□□ -0.89
MALAT1-202ENST00000534336 FAM171BQ6P995 826 aa9.48□□□□□ -0.89
MALAT1-202ENST00000534336 CYP20A1Q6UW02 462 aa9.48□□□□□ -0.89
MALAT1-202ENST00000534336 KCTD1Q719H9 257 aa9.48□□□□□ -0.89
MALAT1-202ENST00000534336 KBTBD8Q8NFY9 601 aa9.48□□□□□ -0.89
MALAT1-202ENST00000534336 DNAJA4Q8WW22 397 aaPredicted RBP9.48□□□□□ -0.89
MALAT1-202ENST00000534336 RNF25Q96BH1 459 aaPredicted RBP9.48□□□□□ -0.89
MALAT1-202ENST00000534336 SUCOQ9UBS9 1254 aaKnown RBP9.48□□□□□ -0.89
MALAT1-202ENST00000534336 ERGIC3Q9Y282 383 aa9.48□□□□□ -0.89
MALAT1-202ENST00000534336 UBN2Q6ZU65 1347 aa9.48□□□□□ -0.89
MALAT1-202ENST00000534336 NOL4O94818 638 aa9.48□□□□□ -0.89
MALAT1-202ENST00000534336 CPB1P15086 417 aa9.48□□□□□ -0.89
MALAT1-202ENST00000534336 POP5Q969H6 163 aaKnown RBP9.48□□□□□ -0.89
MALAT1-202ENST00000534336 MED8Q96G25 268 aa9.48□□□□□ -0.89
MALAT1-202ENST00000534336 FAM89AQ96GI7 184 aa9.48□□□□□ -0.89
MALAT1-202ENST00000534336 REXO5Q96IC2 774 aaKnown RBP9.48□□□□□ -0.89
MALAT1-202ENST00000534336 NEDD4LQ96PU5 975 aa9.48□□□□□ -0.89
MALAT1-202ENST00000534336 BABAM1Q9NWV8 329 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms