RNA–Protein interactions for RNA: ENST00000534234.5

COPB1-211, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 5

Gene COPB1, Length 1,584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-211ENST00000534234 ADRB1P08588 477 aa9.34□□□□□ -0.91
COPB1-211ENST00000534234 VDRP11473 427 aa9.34□□□□□ -0.91
COPB1-211ENST00000534234 TBXAS1P24557 533 aaPredicted RBP9.34□□□□□ -0.91
COPB1-211ENST00000534234 PPP1R2P41236 205 aa9.34□□□□□ -0.91
COPB1-211ENST00000534234 FMO5P49326 533 aa9.34□□□□□ -0.91
COPB1-211ENST00000534234 BCAT1P54687 386 aa9.34□□□□□ -0.91
COPB1-211ENST00000534234 GOLGA7BQ2TAP0 167 aa9.34□□□□□ -0.91
COPB1-211ENST00000534234 MAP7D1Q3KQU3 841 aa9.34□□□□□ -0.91
COPB1-211ENST00000534234 CCDC40Q4G0X9 1142 aa9.34□□□□□ -0.91
COPB1-211ENST00000534234 EGFLAMQ63HQ2 1017 aa9.34□□□□□ -0.91
COPB1-211ENST00000534234 KLHL10Q6JEL2 608 aa9.34□□□□□ -0.91
COPB1-211ENST00000534234 CYP2U1Q7Z449 544 aa9.34□□□□□ -0.91
COPB1-211ENST00000534234 DENND1CQ8IV53 801 aa9.34□□□□□ -0.91
COPB1-211ENST00000534234 TMEFF1Q8IYR6 380 aa9.34□□□□□ -0.91
COPB1-211ENST00000534234 UBA3Q8TBC4 463 aa9.34□□□□□ -0.91
COPB1-211ENST00000534234 NDRG1Q92597 394 aaKnown RBP9.34□□□□□ -0.91
COPB1-211ENST00000534234 CEP63Q96MT8 703 aa9.34□□□□□ -0.91
COPB1-211ENST00000534234 IPO9Q96P70 1041 aaKnown RBP9.34□□□□□ -0.91
COPB1-211ENST00000534234 ULBP1Q9BZM6 244 aa9.34□□□□□ -0.91
COPB1-211ENST00000534234 MBD1Q9UIS9 605 aaPredicted RBP9.34□□□□□ -0.91
COPB1-211ENST00000534234 FBXO10Q9UK96 956 aa9.34□□□□□ -0.91
COPB1-211ENST00000534234 AGO1Q9UL18 857 aaKnown RBP9.34□□□□□ -0.91
COPB1-211ENST00000534234 STRIP2Q9ULQ0 834 aa9.34□□□□□ -0.91
COPB1-211ENST00000534234 NCOR2Q9Y618 2525 aa9.34□□□□□ -0.91
COPB1-211ENST00000534234 GREB1Q4ZG55 1949 aa9.34□□□□□ -0.91
COPB1-211ENST00000534234 ANAPC1Q9H1A4 1944 aa9.34□□□□□ -0.91
COPB1-211ENST00000534234 PTPRDP23468 1912 aa9.33□□□□□ -0.92
COPB1-211ENST00000534234 A0A1W2PQF6 199 aa9.33□□□□□ -0.92
COPB1-211ENST00000534234 C4orf47A7E2U8 309 aa9.33□□□□□ -0.92
COPB1-211ENST00000534234 PATE3B3GLJ2 98 aa9.33□□□□□ -0.92
COPB1-211ENST00000534234 PPP1R3GB7ZBB8 358 aa9.33□□□□□ -0.92
COPB1-211ENST00000534234 WASH3PC4AMC7 463 aa9.33□□□□□ -0.92
COPB1-211ENST00000534234 GABRG2P18507 467 aa9.33□□□□□ -0.92
COPB1-211ENST00000534234 CORO1AP31146 461 aaKnown RBP9.33□□□□□ -0.92
COPB1-211ENST00000534234 PTGER3P43115 390 aa9.33□□□□□ -0.92
COPB1-211ENST00000534234 IRX4P78413 519 aa9.33□□□□□ -0.92
COPB1-211ENST00000534234 BST2Q10589 180 aaKnown RBP9.33□□□□□ -0.92
COPB1-211ENST00000534234 CETN1Q12798 172 aa9.33□□□□□ -0.92
COPB1-211ENST00000534234 SPDYCQ5MJ68 293 aa9.33□□□□□ -0.92
COPB1-211ENST00000534234 FYB2Q5VWT5 728 aa9.33□□□□□ -0.92
COPB1-211ENST00000534234 TMEM270Q6UE05 265 aa9.33□□□□□ -0.92
COPB1-211ENST00000534234 ARMCX6Q7L4S7 300 aa9.33□□□□□ -0.92
COPB1-211ENST00000534234 PPM1KQ8N3J5 372 aa9.33□□□□□ -0.92
COPB1-211ENST00000534234 UBR7Q8N806 425 aa9.33□□□□□ -0.92
COPB1-211ENST00000534234 IPO4Q8TEX9 1081 aaKnown RBP9.33□□□□□ -0.92
COPB1-211ENST00000534234 ERLEC1Q96DZ1 483 aa9.33□□□□□ -0.92
COPB1-211ENST00000534234 P2RY11Q96G91 374 aa9.33□□□□□ -0.92
COPB1-211ENST00000534234 NT5C1BQ96P26 610 aa9.33□□□□□ -0.92
COPB1-211ENST00000534234 GABRG3Q99928 467 aa9.33□□□□□ -0.92
COPB1-211ENST00000534234 EDEM2Q9BV94 578 aa9.33□□□□□ -0.92
COPB1-211ENST00000534234 LSM14BQ9BX40 385 aaKnown RBP9.33□□□□□ -0.92
COPB1-211ENST00000534234 PCDHB4Q9Y5E5 795 aa9.33□□□□□ -0.92
COPB1-211ENST00000534234 ZNF638Q14966 1978 aaKnown RBP9.33□□□□□ -0.92
COPB1-211ENST00000534234 LNP1A1A4G5 178 aa9.33□□□□□ -0.92
COPB1-211ENST00000534234 O00370 1275 aa9.33□□□□□ -0.92
COPB1-211ENST00000534234 GFRA2O00451 464 aa9.33□□□□□ -0.92
COPB1-211ENST00000534234 BIN1O00499 593 aa9.33□□□□□ -0.92
COPB1-211ENST00000534234 PMM2O15305 246 aa9.33□□□□□ -0.92
COPB1-211ENST00000534234 GADD45BO75293 160 aaPredicted RBP9.33□□□□□ -0.92
COPB1-211ENST00000534234 PENKP01210 267 aaPredicted RBP9.33□□□□□ -0.92
COPB1-211ENST00000534234 CYBBP04839 570 aa9.33□□□□□ -0.92
COPB1-211ENST00000534234 PAEPP09466 180 aa9.33□□□□□ -0.92
COPB1-211ENST00000534234 BMP6P22004 513 aa9.33□□□□□ -0.92
COPB1-211ENST00000534234 ADIGQ0VDE8 80 aa9.33□□□□□ -0.92
COPB1-211ENST00000534234 MORC3Q14149 939 aa9.33□□□□□ -0.92
COPB1-211ENST00000534234 BSPRYQ5W0U4 402 aa9.33□□□□□ -0.92
COPB1-211ENST00000534234 KIAA1211LQ6NV74 962 aa9.33□□□□□ -0.92
COPB1-211ENST00000534234 TTI2Q6NXR4 508 aa9.33□□□□□ -0.92
COPB1-211ENST00000534234 LCLAT1Q6UWP7 414 aa9.33□□□□□ -0.92
COPB1-211ENST00000534234 SYT12Q8IV01 421 aa9.33□□□□□ -0.92
COPB1-211ENST00000534234 FMNL3Q8IVF7 1028 aa9.33□□□□□ -0.92
COPB1-211ENST00000534234 SIX6OS1Q8N1H7 587 aa9.33□□□□□ -0.92
COPB1-211ENST00000534234 LMO3Q8TAP4 145 aa9.33□□□□□ -0.92
COPB1-211ENST00000534234 DDI1Q8WTU0 396 aa9.33□□□□□ -0.92
COPB1-211ENST00000534234 RNF139Q8WU17 664 aa9.33□□□□□ -0.92
COPB1-211ENST00000534234 NELFBQ8WX92 580 aa9.33□□□□□ -0.92
COPB1-211ENST00000534234 KCTD13Q8WZ19 329 aa9.33□□□□□ -0.92
COPB1-211ENST00000534234 TFAP2BQ92481 460 aa9.33□□□□□ -0.92
COPB1-211ENST00000534234 EDEM1Q92611 657 aa9.33□□□□□ -0.92
COPB1-211ENST00000534234 CNTNAP3BQ96NU0 1288 aa9.33□□□□□ -0.92
COPB1-211ENST00000534234 CNTNAP3Q9BZ76 1288 aa9.33□□□□□ -0.92
COPB1-211ENST00000534234 ABCC13Q9NSE7 274 aa9.33□□□□□ -0.92
COPB1-211ENST00000534234 OLA1Q9NTK5 396 aaKnown RBP9.33□□□□□ -0.92
COPB1-211ENST00000534234 TMEM74BQ9NUR3 256 aa9.33□□□□□ -0.92
COPB1-211ENST00000534234 CACNA2D2Q9NY47 1150 aa9.33□□□□□ -0.92
COPB1-211ENST00000534234 CALCOCO1Q9P1Z2 691 aa9.33□□□□□ -0.92
COPB1-211ENST00000534234 SLC27A6Q9Y2P4 619 aa9.33□□□□□ -0.92
COPB1-211ENST00000534234 RAD54BQ9Y620 910 aa9.33□□□□□ -0.92
COPB1-211ENST00000534234 BICDL2A1A5D9 508 aa9.32□□□□□ -0.92
COPB1-211ENST00000534234 YJEFN3A6XGL0 299 aa9.32□□□□□ -0.92
COPB1-211ENST00000534234 E7ENQ6 273 aa9.32□□□□□ -0.92
COPB1-211ENST00000534234 RNF225M0QZC1 329 aaPredicted RBP9.32□□□□□ -0.92
COPB1-211ENST00000534234 P4HA2O15460 535 aa9.32□□□□□ -0.92
COPB1-211ENST00000534234 AP5Z1O43299 807 aa9.32□□□□□ -0.92
COPB1-211ENST00000534234 ZNF217O75362 1048 aa9.32□□□□□ -0.92
COPB1-211ENST00000534234 KCNK5O95279 499 aa9.32□□□□□ -0.92
COPB1-211ENST00000534234 SETSIPP0DME0 302 aa9.32□□□□□ -0.92
COPB1-211ENST00000534234 LCP1P13796 627 aa9.32□□□□□ -0.92
COPB1-211ENST00000534234 NDUFV2P19404 249 aa9.32□□□□□ -0.92
COPB1-211ENST00000534234 HARS2P49590 506 aaKnown RBP9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms