RNA–Protein interactions for RNA: ENST00000534131.1

CTSC-209, Transcript of cathepsin C, humanhuman

TSL 2

Gene CTSC, Length 583 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSC-209ENST00000534131 STXBP5Q5T5C0 1151 aa12.32□□□□□ -0.44
CTSC-209ENST00000534131 PLEKHA7Q6IQ23 1121 aa12.32□□□□□ -0.44
CTSC-209ENST00000534131 CC2D1AQ6P1N0 951 aaPredicted RBP12.32□□□□□ -0.44
CTSC-209ENST00000534131 MSANTD2Q6P1R3 559 aa12.32□□□□□ -0.44
CTSC-209ENST00000534131 BHLHA9Q7RTU4 235 aa12.32□□□□□ -0.44
CTSC-209ENST00000534131 ARID3BQ8IVW6 561 aaPredicted RBP12.32□□□□□ -0.44
CTSC-209ENST00000534131 YAF2Q8IY57 180 aa12.32□□□□□ -0.44
CTSC-209ENST00000534131 OLIG1Q8TAK6 271 aa12.32□□□□□ -0.44
CTSC-209ENST00000534131 CALR3Q96L12 384 aaKnown RBP12.32□□□□□ -0.44
CTSC-209ENST00000534131 ASB16Q96NS5 453 aa12.32□□□□□ -0.44
CTSC-209ENST00000534131 NECAB3Q96P71 396 aaPredicted RBP12.32□□□□□ -0.44
CTSC-209ENST00000534131 MCEEQ96PE7 176 aa12.32□□□□□ -0.44
CTSC-209ENST00000534131 MYADMQ96S97 322 aa12.32□□□□□ -0.44
CTSC-209ENST00000534131 PPP1R9BQ96SB3 815 aa12.32□□□□□ -0.44
CTSC-209ENST00000534131 CYP2S1Q96SQ9 504 aa12.32□□□□□ -0.44
CTSC-209ENST00000534131 DDX23Q9BUQ8 820 aaKnown RBP12.32□□□□□ -0.44
CTSC-209ENST00000534131 DCLK3Q9C098 648 aa12.32□□□□□ -0.44
CTSC-209ENST00000534131 FAM204AQ9H8W3 233 aa12.32□□□□□ -0.44
CTSC-209ENST00000534131 OSER1Q9NX31 292 aa12.32□□□□□ -0.44
CTSC-209ENST00000534131 OBP2AQ9NY56 170 aa12.32□□□□□ -0.44
CTSC-209ENST00000534131 EPS15L1Q9UBC2 864 aa12.32□□□□□ -0.44
CTSC-209ENST00000534131 NUDT5Q9UKK9 219 aa12.32□□□□□ -0.44
CTSC-209ENST00000534131 ARHGAP26Q9UNA1 814 aa12.32□□□□□ -0.44
CTSC-209ENST00000534131 NAALADL1Q9UQQ1 740 aa12.32□□□□□ -0.44
CTSC-209ENST00000534131 ZNF510Q9Y2H8 683 aa12.32□□□□□ -0.44
CTSC-209ENST00000534131 HBS1LQ9Y450 684 aaKnown RBP12.32□□□□□ -0.44
CTSC-209ENST00000534131 CPQQ9Y646 472 aa12.32□□□□□ -0.44
CTSC-209ENST00000534131 RNF8O76064 485 aa12.31□□□□□ -0.44
CTSC-209ENST00000534131 OLFM2O95897 454 aa12.31□□□□□ -0.44
CTSC-209ENST00000534131 TRUB2O95900 331 aaKnown RBP12.31□□□□□ -0.44
CTSC-209ENST00000534131 TBX18O95935 607 aa12.31□□□□□ -0.44
CTSC-209ENST00000534131 APOEP02649 317 aa12.31□□□□□ -0.44
CTSC-209ENST00000534131 CYP1A2P05177 515 aa12.31□□□□□ -0.44
CTSC-209ENST00000534131 SLC2A3P11169 496 aa12.31□□□□□ -0.44
CTSC-209ENST00000534131 SP100P23497 879 aaPredicted RBP12.31□□□□□ -0.44
CTSC-209ENST00000534131 NOP2P46087 812 aaKnown RBP12.31□□□□□ -0.44
CTSC-209ENST00000534131 HARS2P49590 506 aaKnown RBP12.31□□□□□ -0.44
CTSC-209ENST00000534131 SULT1E1P49888 294 aa12.31□□□□□ -0.44
CTSC-209ENST00000534131 TBX4P57082 545 aa12.31□□□□□ -0.44
CTSC-209ENST00000534131 DEUP1Q05D60 604 aa12.31□□□□□ -0.44
CTSC-209ENST00000534131 NNTQ13423 1086 aa12.31□□□□□ -0.44
CTSC-209ENST00000534131 MAMLD1Q13495 774 aa12.31□□□□□ -0.44
CTSC-209ENST00000534131 TAF5Q15542 800 aa12.31□□□□□ -0.44
CTSC-209ENST00000534131 SLC25A52Q3SY17 297 aa12.31□□□□□ -0.44
CTSC-209ENST00000534131 RAD9BQ6WBX8 426 aa12.31□□□□□ -0.44
CTSC-209ENST00000534131 MIB1Q86YT6 1006 aa12.31□□□□□ -0.44
CTSC-209ENST00000534131 TMEM139Q8IV31 216 aa12.31□□□□□ -0.44
CTSC-209ENST00000534131 ADHFE1Q8IWW8 467 aa12.31□□□□□ -0.44
CTSC-209ENST00000534131 UNC45BQ8IWX7 931 aa12.31□□□□□ -0.44
CTSC-209ENST00000534131 ZDHHC14Q8IZN3 488 aa12.31□□□□□ -0.44
CTSC-209ENST00000534131 TTC16Q8NEE8 873 aa12.31□□□□□ -0.44
CTSC-209ENST00000534131 RXFP2Q8WXD0 754 aa12.31□□□□□ -0.44
CTSC-209ENST00000534131 PLD4Q96BZ4 506 aa12.31□□□□□ -0.44
CTSC-209ENST00000534131 NUP85Q9BW27 656 aa12.31□□□□□ -0.44
CTSC-209ENST00000534131 RNF38Q9H0F5 515 aa12.31□□□□□ -0.44
CTSC-209ENST00000534131 TRPV4Q9HBA0 871 aa12.31□□□□□ -0.44
CTSC-209ENST00000534131 IGSF9Q9P2J2 1179 aa12.31□□□□□ -0.44
CTSC-209ENST00000534131 SFMBT1Q9UHJ3 866 aa12.31□□□□□ -0.44
CTSC-209ENST00000534131 TMEM59LQ9UK28 342 aa12.31□□□□□ -0.44
CTSC-209ENST00000534131 NENFQ9UMX5 172 aa12.31□□□□□ -0.44
CTSC-209ENST00000534131 SYNJ2BP-COX16A0A087WUM0 186 aa12.3□□□□□ -0.44
CTSC-209ENST00000534131 C2CD4DB7Z1M9 353 aa12.3□□□□□ -0.44
CTSC-209ENST00000534131 M0QYT0 321 aa12.3□□□□□ -0.44
CTSC-209ENST00000534131 MYO1FO00160 1098 aa12.3□□□□□ -0.44
CTSC-209ENST00000534131 LEFTY2O00292 366 aa12.3□□□□□ -0.44
CTSC-209ENST00000534131 SLC9A3R1O14745 358 aaPredicted RBP12.3□□□□□ -0.44
CTSC-209ENST00000534131 ECI2O75521 394 aa12.3□□□□□ -0.44
CTSC-209ENST00000534131 CCDC175P0C221 793 aa12.3□□□□□ -0.44
CTSC-209ENST00000534131 TCF3P15923 654 aa12.3□□□□□ -0.44
CTSC-209ENST00000534131 PSMA2P25787 234 aa12.3□□□□□ -0.44
CTSC-209ENST00000534131 RFC1P35251 1148 aaPredicted RBP12.3□□□□□ -0.44
CTSC-209ENST00000534131 PTPN9P43378 593 aa12.3□□□□□ -0.44
CTSC-209ENST00000534131 VAV2P52735 878 aa12.3□□□□□ -0.44
CTSC-209ENST00000534131 NAP1L1P55209 391 aaKnown RBP12.3□□□□□ -0.44
CTSC-209ENST00000534131 KIF5AQ12840 1032 aa12.3□□□□□ -0.44
CTSC-209ENST00000534131 NME3Q13232 169 aa12.3□□□□□ -0.44
CTSC-209ENST00000534131 MTF1Q14872 753 aa12.3□□□□□ -0.44
CTSC-209ENST00000534131 ACAP1Q15027 740 aa12.3□□□□□ -0.44
CTSC-209ENST00000534131 TRIP4Q15650 581 aaPredicted RBP12.3□□□□□ -0.44
CTSC-209ENST00000534131 IFI16Q16666 785 aaKnown RBP12.3□□□□□ -0.44
CTSC-209ENST00000534131 ARL13BQ3SXY8 428 aa12.3□□□□□ -0.44
CTSC-209ENST00000534131 FAM78AQ5JUQ0 283 aa12.3□□□□□ -0.44
CTSC-209ENST00000534131 SYPL2Q5VXT5 272 aa12.3□□□□□ -0.44
CTSC-209ENST00000534131 NUGGCQ68CJ6 796 aa12.3□□□□□ -0.44
CTSC-209ENST00000534131 DNAAF5Q86Y56 855 aa12.3□□□□□ -0.44
CTSC-209ENST00000534131 EMC1Q8N766 993 aa12.3□□□□□ -0.44
CTSC-209ENST00000534131 KIAA1958Q8N8K9 716 aa12.3□□□□□ -0.44
CTSC-209ENST00000534131 ATP6V0D2Q8N8Y2 350 aa12.3□□□□□ -0.44
CTSC-209ENST00000534131 ZNF564Q8TBZ8 553 aaPredicted RBP12.3□□□□□ -0.44
CTSC-209ENST00000534131 BPIFB1Q8TDL5 484 aa12.3□□□□□ -0.44
CTSC-209ENST00000534131 DQX1Q8TE96 717 aaKnown RBP12.3□□□□□ -0.44
CTSC-209ENST00000534131 DEPDC1BQ8WUY9 529 aa12.3□□□□□ -0.44
CTSC-209ENST00000534131 ELSPBP1Q96BH3 223 aa12.3□□□□□ -0.44
CTSC-209ENST00000534131 PIWIL1Q96J94 861 aaKnown RBP12.3□□□□□ -0.44
CTSC-209ENST00000534131 ZSWIM3Q96MP5 696 aa12.3□□□□□ -0.44
CTSC-209ENST00000534131 DDX50Q9BQ39 737 aaKnown RBP12.3□□□□□ -0.44
CTSC-209ENST00000534131 CNPY3Q9BT09 278 aa12.3□□□□□ -0.44
CTSC-209ENST00000534131 KLF16Q9BXK1 252 aaPredicted RBP12.3□□□□□ -0.44
CTSC-209ENST00000534131 TSGA10Q9BZW7 698 aa12.3□□□□□ -0.44
CTSC-209ENST00000534131 SMOC2Q9H3U7 446 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms