RNA–Protein interactions for RNA: ENST00000534049.5

ITGB1-219, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-219ENST00000534049 SH3BP4Q9P0V3 963 aa4.74□□□□□ -1.65
ITGB1-219ENST00000534049 SERGEFQ9UGK8 458 aa4.74□□□□□ -1.65
ITGB1-219ENST00000534049 ADAMTS5Q9UNA0 930 aa4.74□□□□□ -1.65
ITGB1-219ENST00000534049 LRP6O75581 1613 aa4.74□□□□□ -1.65
ITGB1-219ENST00000534049 AHDC1Q5TGY3 1603 aaPredicted RBP4.74□□□□□ -1.65
ITGB1-219ENST00000534049 ZNF804BA4D1E1 1349 aa4.73□□□□□ -1.65
ITGB1-219ENST00000534049 RPGRIP1LQ68CZ1 1315 aa4.73□□□□□ -1.65
ITGB1-219ENST00000534049 NAIPQ13075 1403 aa4.73□□□□□ -1.65
ITGB1-219ENST00000534049 FAM135BQ49AJ0 1406 aa4.73□□□□□ -1.65
ITGB1-219ENST00000534049 PTPRUQ92729 1446 aa4.73□□□□□ -1.65
ITGB1-219ENST00000534049 H7C1Q1 480 aa4.73□□□□□ -1.65
ITGB1-219ENST00000534049 BTN3A1O00481 513 aa4.73□□□□□ -1.65
ITGB1-219ENST00000534049 TBC1D4O60343 1298 aa4.73□□□□□ -1.65
ITGB1-219ENST00000534049 SMC2O95347 1197 aa4.73□□□□□ -1.65
ITGB1-219ENST00000534049 PDHA1P08559 390 aa4.73□□□□□ -1.65
ITGB1-219ENST00000534049 CCDC175P0C221 793 aa4.73□□□□□ -1.65
ITGB1-219ENST00000534049 EN2P19622 333 aaPredicted RBP4.73□□□□□ -1.65
ITGB1-219ENST00000534049 CLCN2P51788 898 aa4.73□□□□□ -1.65
ITGB1-219ENST00000534049 DGKEP52429 567 aa4.73□□□□□ -1.65
ITGB1-219ENST00000534049 RHBDL3P58872 404 aa4.73□□□□□ -1.65
ITGB1-219ENST00000534049 TPM4P67936 248 aa4.73□□□□□ -1.65
ITGB1-219ENST00000534049 TUBA4AP68366 448 aa4.73□□□□□ -1.65
ITGB1-219ENST00000534049 HOXA4Q00056 320 aaPredicted RBP4.73□□□□□ -1.65
ITGB1-219ENST00000534049 KRTAP1-1Q07627 177 aa4.73□□□□□ -1.65
ITGB1-219ENST00000534049 ZRSR1Q15695 479 aaKnown RBP4.73□□□□□ -1.65
ITGB1-219ENST00000534049 EPM2AIP1Q7L775 607 aaPredicted RBP4.73□□□□□ -1.65
ITGB1-219ENST00000534049 SDCCAG8Q86SQ7 713 aaPredicted RBP4.73□□□□□ -1.65
ITGB1-219ENST00000534049 MORC1Q86VD1 984 aa4.73□□□□□ -1.65
ITGB1-219ENST00000534049 RAB11FIP4Q86YS3 637 aa4.73□□□□□ -1.65
ITGB1-219ENST00000534049 DRAXINQ8NBI3 349 aaPredicted RBP4.73□□□□□ -1.65
ITGB1-219ENST00000534049 TDRD7Q8NHU6 1098 aaKnown RBP4.73□□□□□ -1.65
ITGB1-219ENST00000534049 CCDC26Q8TAB7 109 aa4.73□□□□□ -1.65
ITGB1-219ENST00000534049 SMCR8Q8TEV9 937 aaPredicted RBP4.73□□□□□ -1.65
ITGB1-219ENST00000534049 HDAC7Q8WUI4 952 aa4.73□□□□□ -1.65
ITGB1-219ENST00000534049 DNAAF4Q8WXU2 420 aa4.73□□□□□ -1.65
ITGB1-219ENST00000534049 TEKT1Q969V4 418 aa4.73□□□□□ -1.65
ITGB1-219ENST00000534049 DAZAP1Q96EP5 407 aaKnown RBP4.73□□□□□ -1.65
ITGB1-219ENST00000534049 LRGUKQ96M69 825 aa4.73□□□□□ -1.65
ITGB1-219ENST00000534049 ACO2Q99798 780 aaKnown RBP4.73□□□□□ -1.65
ITGB1-219ENST00000534049 ARPC5LQ9BPX5 153 aa4.73□□□□□ -1.65
ITGB1-219ENST00000534049 SLC29A3Q9BZD2 475 aa4.73□□□□□ -1.65
ITGB1-219ENST00000534049 ZNF518BQ9C0D4 1074 aa4.73□□□□□ -1.65
ITGB1-219ENST00000534049 NRIP3Q9NQ35 241 aa4.73□□□□□ -1.65
ITGB1-219ENST00000534049 C1orf112Q9NSG2 853 aa4.73□□□□□ -1.65
ITGB1-219ENST00000534049 IRAK4Q9NWZ3 460 aa4.73□□□□□ -1.65
ITGB1-219ENST00000534049 CTNNA3Q9UI47 895 aa4.73□□□□□ -1.65
ITGB1-219ENST00000534049 CCNL1Q9UK58 526 aaPredicted RBP4.73□□□□□ -1.65
ITGB1-219ENST00000534049 GABRQQ9UN88 632 aa4.73□□□□□ -1.65
ITGB1-219ENST00000534049 KTN1Q86UP2 1357 aaKnown RBP4.73□□□□□ -1.65
ITGB1-219ENST00000534049 HFM1A2PYH4 1435 aa4.72□□□□□ -1.65
ITGB1-219ENST00000534049 ASXL1Q8IXJ9 1541 aa4.72□□□□□ -1.65
ITGB1-219ENST00000534049 NALCNQ8IZF0 1738 aa4.72□□□□□ -1.65
ITGB1-219ENST00000534049 CHD2O14647 1828 aaKnown RBP4.72□□□□□ -1.65
ITGB1-219ENST00000534049 CAPN8A6NHC0 703 aa4.72□□□□□ -1.65
ITGB1-219ENST00000534049 MYO1FO00160 1098 aa4.72□□□□□ -1.65
ITGB1-219ENST00000534049 ZNF213O14771 459 aa4.72□□□□□ -1.65
ITGB1-219ENST00000534049 FRS3O43559 492 aa4.72□□□□□ -1.65
ITGB1-219ENST00000534049 CTNND1O60716 968 aaKnown RBP4.72□□□□□ -1.65
ITGB1-219ENST00000534049 TOM1O60784 492 aa4.72□□□□□ -1.65
ITGB1-219ENST00000534049 ERLIN1O75477 346 aa4.72□□□□□ -1.65
ITGB1-219ENST00000534049 TUSC2O75896 110 aa4.72□□□□□ -1.65
ITGB1-219ENST00000534049 NBPF7P0C2Y1 421 aaPredicted RBP4.72□□□□□ -1.65
ITGB1-219ENST00000534049 NPR1P16066 1061 aa4.72□□□□□ -1.65
ITGB1-219ENST00000534049 PRKAG1P54619 331 aa4.72□□□□□ -1.65
ITGB1-219ENST00000534049 TFF2Q03403 129 aa4.72□□□□□ -1.65
ITGB1-219ENST00000534049 SLC13A2Q13183 592 aa4.72□□□□□ -1.65
ITGB1-219ENST00000534049 CRYMQ14894 314 aa4.72□□□□□ -1.65
ITGB1-219ENST00000534049 SLC5A9Q2M3M2 681 aa4.72□□□□□ -1.65
ITGB1-219ENST00000534049 PROSER3Q2NL68 480 aa4.72□□□□□ -1.65
ITGB1-219ENST00000534049 MINDY4Q4G0A6 757 aa4.72□□□□□ -1.65
ITGB1-219ENST00000534049 DNAJC21Q5F1R6 531 aaKnown RBP4.72□□□□□ -1.65
ITGB1-219ENST00000534049 CERCAMQ5T4B2 595 aa4.72□□□□□ -1.65
ITGB1-219ENST00000534049 TRIM72Q6ZMU5 477 aa4.72□□□□□ -1.65
ITGB1-219ENST00000534049 Q6ZWC4 215 aa4.72□□□□□ -1.65
ITGB1-219ENST00000534049 MAEAQ7L5Y9 396 aa4.72□□□□□ -1.65
ITGB1-219ENST00000534049 TRIM74Q86UV6 250 aa4.72□□□□□ -1.65
ITGB1-219ENST00000534049 TRIM73Q86UV7 250 aa4.72□□□□□ -1.65
ITGB1-219ENST00000534049 TPH2Q8IWU9 490 aa4.72□□□□□ -1.65
ITGB1-219ENST00000534049 SLC15A4Q8N697 577 aa4.72□□□□□ -1.65
ITGB1-219ENST00000534049 VGLL2Q8N8G2 317 aa4.72□□□□□ -1.65
ITGB1-219ENST00000534049 MIPOL1Q8TD10 442 aa4.72□□□□□ -1.65
ITGB1-219ENST00000534049 XAGE5Q8WWM1 108 aa4.72□□□□□ -1.65
ITGB1-219ENST00000534049 PIBF1Q8WXW3 757 aa4.72□□□□□ -1.65
ITGB1-219ENST00000534049 R3HDM4Q96D70 268 aa4.72□□□□□ -1.65
ITGB1-219ENST00000534049 REPS1Q96D71 796 aa4.72□□□□□ -1.65
ITGB1-219ENST00000534049 P2RX7Q99572 595 aaKnown RBP4.72□□□□□ -1.65
ITGB1-219ENST00000534049 CRACR2AQ9BSW2 395 aa4.72□□□□□ -1.65
ITGB1-219ENST00000534049 UTP14AQ9BVJ6 771 aaKnown RBP4.72□□□□□ -1.65
ITGB1-219ENST00000534049 DPCDQ9BVM2 203 aaPredicted RBP4.72□□□□□ -1.65
ITGB1-219ENST00000534049 C22orf23Q9BZE7 217 aa4.72□□□□□ -1.65
ITGB1-219ENST00000534049 CXorf36Q9H7Y0 433 aa4.72□□□□□ -1.65
ITGB1-219ENST00000534049 FAM204AQ9H8W3 233 aa4.72□□□□□ -1.65
ITGB1-219ENST00000534049 TRPV5Q9NQA5 729 aa4.72□□□□□ -1.65
ITGB1-219ENST00000534049 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.72□□□□□ -1.65
ITGB1-219ENST00000534049 ZNF70Q9UC06 446 aaPredicted RBP4.72□□□□□ -1.65
ITGB1-219ENST00000534049 STAP2Q9UGK3 403 aa4.72□□□□□ -1.65
ITGB1-219ENST00000534049 THRAP3Q9Y2W1 955 aaKnown RBP4.72□□□□□ -1.65
ITGB1-219ENST00000534049 SRCAPQ6ZRS2 3230 aa4.72□□□□□ -1.65
ITGB1-219ENST00000534049 DCCP43146 1447 aa4.72□□□□□ -1.65
ITGB1-219ENST00000534049 PTCH1Q13635 1447 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms