RNA–Protein interactions for RNA: ENST00000533730.5

CASP4-212, Transcript of caspase 4, humanhuman

TSL 1 (best)

Gene CASP4, Length 1,214 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-212ENST00000533730 CITO14578 2027 aa8.22□□□□□ -1.09
CASP4-212ENST00000533730 CCDC189A1A4V9 331 aa8.21□□□□□ -1.1
CASP4-212ENST00000533730 ARHGEF37A1IGU5 675 aa8.21□□□□□ -1.1
CASP4-212ENST00000533730 CASTOR2A6NHX0 329 aa8.21□□□□□ -1.1
CASP4-212ENST00000533730 H0Y8X5 98 aa8.21□□□□□ -1.1
CASP4-212ENST00000533730 SH3BP5O60239 455 aa8.21□□□□□ -1.1
CASP4-212ENST00000533730 EXOC3O60645 756 aa8.21□□□□□ -1.1
CASP4-212ENST00000533730 LRRN2O75325 713 aa8.21□□□□□ -1.1
CASP4-212ENST00000533730 TADA2AO75478 443 aa8.21□□□□□ -1.1
CASP4-212ENST00000533730 SLITRK5O94991 958 aa8.21□□□□□ -1.1
CASP4-212ENST00000533730 MBD3O95983 291 aa8.21□□□□□ -1.1
CASP4-212ENST00000533730 SOD2P04179 222 aa8.21□□□□□ -1.1
CASP4-212ENST00000533730 URODP06132 367 aa8.21□□□□□ -1.1
CASP4-212ENST00000533730 CTSAP10619 480 aa8.21□□□□□ -1.1
CASP4-212ENST00000533730 FSTP19883 344 aa8.21□□□□□ -1.1
CASP4-212ENST00000533730 RAB6AP20340 208 aa8.21□□□□□ -1.1
CASP4-212ENST00000533730 RPL13P26373 211 aaKnown RBP8.21□□□□□ -1.1
CASP4-212ENST00000533730 LRPAP1P30533 357 aa8.21□□□□□ -1.1
CASP4-212ENST00000533730 CYP2J2P51589 502 aa8.21□□□□□ -1.1
CASP4-212ENST00000533730 NEK3P51956 506 aa8.21□□□□□ -1.1
CASP4-212ENST00000533730 GPR85P60893 370 aa8.21□□□□□ -1.1
CASP4-212ENST00000533730 KLF1Q13351 362 aaPredicted RBP8.21□□□□□ -1.1
CASP4-212ENST00000533730 ZBTB6Q15916 424 aa8.21□□□□□ -1.1
CASP4-212ENST00000533730 NFIL3Q16649 462 aa8.21□□□□□ -1.1
CASP4-212ENST00000533730 UPP1Q16831 310 aa8.21□□□□□ -1.1
CASP4-212ENST00000533730 USP41Q3LFD5 358 aa8.21□□□□□ -1.1
CASP4-212ENST00000533730 MINDY4Q4G0A6 757 aa8.21□□□□□ -1.1
CASP4-212ENST00000533730 ZBTB41Q5SVQ8 909 aa8.21□□□□□ -1.1
CASP4-212ENST00000533730 SPATA1Q5VX52 437 aa8.21□□□□□ -1.1
CASP4-212ENST00000533730 RNF43Q68DV7 783 aa8.21□□□□□ -1.1
CASP4-212ENST00000533730 IL31Q6EBC2 164 aa8.21□□□□□ -1.1
CASP4-212ENST00000533730 JADE1Q6IE81 842 aa8.21□□□□□ -1.1
CASP4-212ENST00000533730 KIAA1841Q6NSI8 718 aa8.21□□□□□ -1.1
CASP4-212ENST00000533730 FUT10Q6P4F1 479 aa8.21□□□□□ -1.1
CASP4-212ENST00000533730 CRELD2Q6UXH1 353 aaPredicted RBP8.21□□□□□ -1.1
CASP4-212ENST00000533730 TMC3Q7Z5M5 1100 aa8.21□□□□□ -1.1
CASP4-212ENST00000533730 USP37Q86T82 979 aa8.21□□□□□ -1.1
CASP4-212ENST00000533730 CPA6Q8N4T0 437 aa8.21□□□□□ -1.1
CASP4-212ENST00000533730 SAAL1Q96ER3 474 aa8.21□□□□□ -1.1
CASP4-212ENST00000533730 ZMAT2Q96NC0 199 aaKnown RBP8.21□□□□□ -1.1
CASP4-212ENST00000533730 TSG101Q99816 390 aa8.21□□□□□ -1.1
CASP4-212ENST00000533730 TCF25Q9BQ70 676 aa8.21□□□□□ -1.1
CASP4-212ENST00000533730 HERC2P3Q9BVR0 1158 aa8.21□□□□□ -1.1
CASP4-212ENST00000533730 ZBP1Q9H171 429 aa8.21□□□□□ -1.1
CASP4-212ENST00000533730 IKZF4Q9H2S9 585 aa8.21□□□□□ -1.1
CASP4-212ENST00000533730 KCTD10Q9H3F6 313 aa8.21□□□□□ -1.1
CASP4-212ENST00000533730 PCIF1Q9H4Z3 704 aa8.21□□□□□ -1.1
CASP4-212ENST00000533730 MRPL17Q9NRX2 175 aaKnown RBP8.21□□□□□ -1.1
CASP4-212ENST00000533730 MARCH5Q9NX47 278 aa8.21□□□□□ -1.1
CASP4-212ENST00000533730 PRR13Q9NZ81 148 aa8.21□□□□□ -1.1
CASP4-212ENST00000533730 B4GALT6Q9UBX8 382 aa8.21□□□□□ -1.1
CASP4-212ENST00000533730 PCOLCE2Q9UKZ9 415 aa8.21□□□□□ -1.1
CASP4-212ENST00000533730 ANKRD6Q9Y2G4 727 aa8.21□□□□□ -1.1
CASP4-212ENST00000533730 IRAK3Q9Y616 596 aa8.21□□□□□ -1.1
CASP4-212ENST00000533730 GOLGA8IPA6NC78 632 aa8.2□□□□□ -1.1
CASP4-212ENST00000533730 GOLGA8JA6NMD2 632 aa8.2□□□□□ -1.1
CASP4-212ENST00000533730 PODXLO00592 558 aa8.2□□□□□ -1.1
CASP4-212ENST00000533730 PSMA7O14818 248 aa8.2□□□□□ -1.1
CASP4-212ENST00000533730 CLIC2O15247 247 aa8.2□□□□□ -1.1
CASP4-212ENST00000533730 MAPK13O15264 365 aa8.2□□□□□ -1.1
CASP4-212ENST00000533730 MEFVO15553 781 aaPredicted RBP8.2□□□□□ -1.1
CASP4-212ENST00000533730 ULK1O75385 1050 aa8.2□□□□□ -1.1
CASP4-212ENST00000533730 B3GAT3O94766 335 aa8.2□□□□□ -1.1
CASP4-212ENST00000533730 EFEMP2O95967 443 aa8.2□□□□□ -1.1
CASP4-212ENST00000533730 NR3C1P04150 777 aa8.2□□□□□ -1.1
CASP4-212ENST00000533730 CKMP06732 381 aa8.2□□□□□ -1.1
CASP4-212ENST00000533730 THBDP07204 575 aa8.2□□□□□ -1.1
CASP4-212ENST00000533730 SRGAP2BP0DMP2 458 aa8.2□□□□□ -1.1
CASP4-212ENST00000533730 PTMSP20962 102 aa8.2□□□□□ -1.1
CASP4-212ENST00000533730 DNAJB1P25685 340 aa8.2□□□□□ -1.1
CASP4-212ENST00000533730 ETV3P41162 512 aa8.2□□□□□ -1.1
CASP4-212ENST00000533730 GLUD2P49448 558 aa8.2□□□□□ -1.1
CASP4-212ENST00000533730 CLCNKBP51801 687 aa8.2□□□□□ -1.1
CASP4-212ENST00000533730 LRRC63Q05C16 580 aa8.2□□□□□ -1.1
CASP4-212ENST00000533730 CAMK1Q14012 370 aa8.2□□□□□ -1.1
CASP4-212ENST00000533730 SNRNP35Q16560 246 aaKnown RBP8.2□□□□□ -1.1
CASP4-212ENST00000533730 EDRF1Q3B7T1 1238 aa8.2□□□□□ -1.1
CASP4-212ENST00000533730 FOXR2Q6PJQ5 311 aa8.2□□□□□ -1.1
CASP4-212ENST00000533730 C11orf74Q86VG3 221 aa8.2□□□□□ -1.1
CASP4-212ENST00000533730 TMEM173Q86WV6 379 aaPredicted RBP8.2□□□□□ -1.1
CASP4-212ENST00000533730 RNF168Q8IYW5 571 aaPredicted RBP8.2□□□□□ -1.1
CASP4-212ENST00000533730 MRPL43Q8N983 215 aaKnown RBP8.2□□□□□ -1.1
CASP4-212ENST00000533730 CLRN3Q8NCR9 226 aa8.2□□□□□ -1.1
CASP4-212ENST00000533730 NOC3LQ8WTT2 800 aaKnown RBP8.2□□□□□ -1.1
CASP4-212ENST00000533730 FRS2Q8WU20 508 aa8.2□□□□□ -1.1
CASP4-212ENST00000533730 BCL7CQ8WUZ0 217 aaPredicted RBP8.2□□□□□ -1.1
CASP4-212ENST00000533730 GATA6Q92908 595 aa8.2□□□□□ -1.1
CASP4-212ENST00000533730 C18orf25Q96B23 403 aaPredicted RBP8.2□□□□□ -1.1
CASP4-212ENST00000533730 CLIP3Q96DZ5 547 aa8.2□□□□□ -1.1
CASP4-212ENST00000533730 DHTKD1Q96HY7 919 aaPredicted RBP8.2□□□□□ -1.1
CASP4-212ENST00000533730 ANKRD36BP1Q96IX9 119 aa8.2□□□□□ -1.1
CASP4-212ENST00000533730 FNBP1Q96RU3 617 aa8.2□□□□□ -1.1
CASP4-212ENST00000533730 ZFYVE21Q9BQ24 234 aa8.2□□□□□ -1.1
CASP4-212ENST00000533730 SARGQ9BW04 601 aa8.2□□□□□ -1.1
CASP4-212ENST00000533730 YIPF2Q9BWQ6 316 aa8.2□□□□□ -1.1
CASP4-212ENST00000533730 NUP62CLQ9H1M0 184 aa8.2□□□□□ -1.1
CASP4-212ENST00000533730 CLSTN2Q9H4D0 955 aa8.2□□□□□ -1.1
CASP4-212ENST00000533730 TLE6Q9H808 572 aa8.2□□□□□ -1.1
CASP4-212ENST00000533730 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.2□□□□□ -1.1
CASP4-212ENST00000533730 C1GALT1Q9NS00 363 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms