RNA–Protein interactions for RNA: ENST00000533533.5

COPB1-210, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-210ENST00000533533 CYP3A43Q9HB55 503 aa9.19□□□□□ -0.94
COPB1-210ENST00000533533 ARHGEF4Q9NR80 690 aa9.19□□□□□ -0.94
COPB1-210ENST00000533533 TMEM74BQ9NUR3 256 aa9.19□□□□□ -0.94
COPB1-210ENST00000533533 BCCIPQ9P287 314 aaKnown RBP eCLIP9.19□□□□□ -0.94
COPB1-210ENST00000533533 TBC1D14Q9P2M4 693 aa9.19□□□□□ -0.94
COPB1-210ENST00000533533 HMGXB4Q9UGU5 601 aa9.19□□□□□ -0.94
COPB1-210ENST00000533533 MBD1Q9UIS9 605 aaPredicted RBP9.19□□□□□ -0.94
COPB1-210ENST00000533533 NME7Q9Y5B8 376 aa9.19□□□□□ -0.94
COPB1-210ENST00000533533 ATP8B3O60423 1300 aa9.19□□□□□ -0.94
COPB1-210ENST00000533533 TCRBV21S2A2A0A5A6 115 aa9.18□□□□□ -0.94
COPB1-210ENST00000533533 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.18□□□□□ -0.94
COPB1-210ENST00000533533 KCNJ18B7U540 433 aa9.18□□□□□ -0.94
COPB1-210ENST00000533533 CLDN5O00501 218 aa9.18□□□□□ -0.94
COPB1-210ENST00000533533 MBL2P11226 248 aaPredicted RBP9.18□□□□□ -0.94
COPB1-210ENST00000533533 CCDC130P13994 396 aa9.18□□□□□ -0.94
COPB1-210ENST00000533533 ENGP17813 658 aa9.18□□□□□ -0.94
COPB1-210ENST00000533533 ITPKAP23677 461 aa9.18□□□□□ -0.94
COPB1-210ENST00000533533 ADORA2BP29275 332 aa9.18□□□□□ -0.94
COPB1-210ENST00000533533 HOXD12P35452 270 aa9.18□□□□□ -0.94
COPB1-210ENST00000533533 MAPK8P45983 427 aa9.18□□□□□ -0.94
COPB1-210ENST00000533533 CACNA2D1P54289 1103 aa9.18□□□□□ -0.94
COPB1-210ENST00000533533 KDSRQ06136 332 aa9.18□□□□□ -0.94
COPB1-210ENST00000533533 TYRO3Q06418 890 aa9.18□□□□□ -0.94
COPB1-210ENST00000533533 KCNJ12Q14500 433 aa9.18□□□□□ -0.94
COPB1-210ENST00000533533 LY6G5CQ5SRR4 150 aa9.18□□□□□ -0.94
COPB1-210ENST00000533533 LYSMD4Q5XG99 296 aa9.18□□□□□ -0.94
COPB1-210ENST00000533533 C11orf57Q6ZUT1 292 aaPredicted RBP9.18□□□□□ -0.94
COPB1-210ENST00000533533 PIP4P1Q86T03 277 aa9.18□□□□□ -0.94
COPB1-210ENST00000533533 PPM1KQ8N3J5 372 aa9.18□□□□□ -0.94
COPB1-210ENST00000533533 PHTF2Q8N3S3 785 aa9.18□□□□□ -0.94
COPB1-210ENST00000533533 OTUB2Q96DC9 234 aa9.18□□□□□ -0.94
COPB1-210ENST00000533533 PCDH15Q96QU1 1955 aa9.18□□□□□ -0.94
COPB1-210ENST00000533533 ARID3AQ99856 593 aa9.18□□□□□ -0.94
COPB1-210ENST00000533533 CRACR2AQ9BSW2 395 aa9.18□□□□□ -0.94
COPB1-210ENST00000533533 NT5C1AQ9BXI3 368 aa9.18□□□□□ -0.94
COPB1-210ENST00000533533 ZNF518BQ9C0D4 1074 aa9.18□□□□□ -0.94
COPB1-210ENST00000533533 ELOVL4Q9GZR5 314 aa9.18□□□□□ -0.94
COPB1-210ENST00000533533 ZDHHC4Q9NPG8 344 aa9.18□□□□□ -0.94
COPB1-210ENST00000533533 SAMSN1Q9NSI8 373 aaKnown RBP9.18□□□□□ -0.94
COPB1-210ENST00000533533 FAM49BQ9NUQ9 324 aa9.18□□□□□ -0.94
COPB1-210ENST00000533533 TMEM30AQ9NV96 361 aa9.18□□□□□ -0.94
COPB1-210ENST00000533533 PILRBQ9UKJ0 227 aa9.18□□□□□ -0.94
COPB1-210ENST00000533533 NFE2L3Q9Y4A8 694 aa9.18□□□□□ -0.94
COPB1-210ENST00000533533 ATXN2Q99700 1313 aaKnown RBP9.17□□□□□ -0.94
COPB1-210ENST00000533533 HELZ2Q9BYK8 2649 aaKnown RBP9.17□□□□□ -0.94
COPB1-210ENST00000533533 E2F8A0AVK6 867 aa9.17□□□□□ -0.94
COPB1-210ENST00000533533 SYCE3A1L190 88 aa9.17□□□□□ -0.94
COPB1-210ENST00000533533 TBC1D3BA6NDS4 549 aa9.17□□□□□ -0.94
COPB1-210ENST00000533533 SRRM3A6NNA2 597 aaPredicted RBP9.17□□□□□ -0.94
COPB1-210ENST00000533533 UPK3BL1B0FP48 263 aa9.17□□□□□ -0.94
COPB1-210ENST00000533533 UPK3BL2E5RIL1 263 aa9.17□□□□□ -0.94
COPB1-210ENST00000533533 P4HA2O15460 535 aa9.17□□□□□ -0.94
COPB1-210ENST00000533533 AP5Z1O43299 807 aa9.17□□□□□ -0.94
COPB1-210ENST00000533533 COCHO43405 550 aa9.17□□□□□ -0.94
COPB1-210ENST00000533533 HYAL3O43820 417 aaPredicted RBP9.17□□□□□ -0.94
COPB1-210ENST00000533533 RTN3O95197 1032 aaPredicted RBP9.17□□□□□ -0.94
COPB1-210ENST00000533533 TPM2P07951 284 aa9.17□□□□□ -0.94
COPB1-210ENST00000533533 CDK11BP21127 795 aaKnown RBP9.17□□□□□ -0.94
COPB1-210ENST00000533533 YWHAQP27348 245 aa9.17□□□□□ -0.94
COPB1-210ENST00000533533 MARSP56192 900 aaKnown RBP9.17□□□□□ -0.94
COPB1-210ENST00000533533 YWHAEP62258 255 aaKnown RBP9.17□□□□□ -0.94
COPB1-210ENST00000533533 GAD2Q05329 585 aa9.17□□□□□ -0.94
COPB1-210ENST00000533533 SEMA3BQ13214 749 aa9.17□□□□□ -0.94
COPB1-210ENST00000533533 CUL2Q13617 745 aa9.17□□□□□ -0.94
COPB1-210ENST00000533533 MAN2A1Q16706 1144 aa9.17□□□□□ -0.94
COPB1-210ENST00000533533 KLHL40Q2TBA0 621 aa9.17□□□□□ -0.94
COPB1-210ENST00000533533 PREPLQ4J6C6 727 aaPredicted RBP9.17□□□□□ -0.94
COPB1-210ENST00000533533 ANO6Q4KMQ2 910 aa9.17□□□□□ -0.94
COPB1-210ENST00000533533 CT47A1Q5JQC4 288 aaPredicted RBP9.17□□□□□ -0.94
COPB1-210ENST00000533533 PEAR1Q5VY43 1037 aaPredicted RBP9.17□□□□□ -0.94
COPB1-210ENST00000533533 KIAA1211LQ6NV74 962 aa9.17□□□□□ -0.94
COPB1-210ENST00000533533 RRAGAQ7L523 313 aa9.17□□□□□ -0.94
COPB1-210ENST00000533533 UNC93AQ86WB7 457 aa9.17□□□□□ -0.94
COPB1-210ENST00000533533 IRF2BP1Q8IU81 584 aa9.17□□□□□ -0.94
COPB1-210ENST00000533533 ETFBKMTQ8IXQ9 262 aa9.17□□□□□ -0.94
COPB1-210ENST00000533533 NUP93Q8N1F7 819 aa9.17□□□□□ -0.94
COPB1-210ENST00000533533 PGBD3Q8N328 593 aa9.17□□□□□ -0.94
COPB1-210ENST00000533533 ZNF513Q8N8E2 541 aaPredicted RBP9.17□□□□□ -0.94
COPB1-210ENST00000533533 C12orf29Q8N999 325 aa9.17□□□□□ -0.94
COPB1-210ENST00000533533 EHBP1Q8NDI1 1231 aa9.17□□□□□ -0.94
COPB1-210ENST00000533533 PDZD8Q8NEN9 1154 aa9.17□□□□□ -0.94
COPB1-210ENST00000533533 ENOX1Q8TC92 643 aaKnown RBP9.17□□□□□ -0.94
COPB1-210ENST00000533533 SLC2A14Q8TDB8 520 aa9.17□□□□□ -0.94
COPB1-210ENST00000533533 KCNV2Q8TDN2 545 aa9.17□□□□□ -0.94
COPB1-210ENST00000533533 OVCA2Q8WZ82 227 aa9.17□□□□□ -0.94
COPB1-210ENST00000533533 FBXO32Q969P5 355 aa9.17□□□□□ -0.94
COPB1-210ENST00000533533 JAKMIP2Q96AA8 810 aa9.17□□□□□ -0.94
COPB1-210ENST00000533533 ZFRQ96KR1 1074 aaKnown RBP9.17□□□□□ -0.94
COPB1-210ENST00000533533 HEXIM2Q96MH2 286 aaKnown RBP9.17□□□□□ -0.94
COPB1-210ENST00000533533 TWNKQ96RR1 684 aa9.17□□□□□ -0.94
COPB1-210ENST00000533533 TUBGCP2Q9BSJ2 902 aa9.17□□□□□ -0.94
COPB1-210ENST00000533533 B3GNT5Q9BYG0 378 aa9.17□□□□□ -0.94
COPB1-210ENST00000533533 NAT10Q9H0A0 1025 aaKnown RBP9.17□□□□□ -0.94
COPB1-210ENST00000533533 INTS2Q9H0H0 1204 aaKnown RBP9.17□□□□□ -0.94
COPB1-210ENST00000533533 CISHQ9NSE2 258 aa9.17□□□□□ -0.94
COPB1-210ENST00000533533 TAB2Q9NYJ8 693 aa9.17□□□□□ -0.94
COPB1-210ENST00000533533 COQ4Q9Y3A0 265 aa9.17□□□□□ -0.94
COPB1-210ENST00000533533 NEUROG3Q9Y4Z2 214 aa9.17□□□□□ -0.94
COPB1-210ENST00000533533 PCDHB4Q9Y5E5 795 aa9.17□□□□□ -0.94
COPB1-210ENST00000533533 NUMA1Q14980 2115 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms