RNA–Protein interactions for RNA: ENST00000533246.5

BDNF-218, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,000 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-218ENST00000533246 ETS2P15036 469 aa12.61□□□□□ -0.39
BDNF-218ENST00000533246 ESRRGP62508 458 aa12.61□□□□□ -0.39
BDNF-218ENST00000533246 BEX3Q00994 111 aa12.61□□□□□ -0.39
BDNF-218ENST00000533246 ITGA7Q13683 1181 aa12.61□□□□□ -0.39
BDNF-218ENST00000533246 GRIK4Q16099 956 aa12.61□□□□□ -0.39
BDNF-218ENST00000533246 CHSY1Q86X52 802 aa12.61□□□□□ -0.39
BDNF-218ENST00000533246 RIBC1Q8N443 379 aaPredicted RBP12.61□□□□□ -0.39
BDNF-218ENST00000533246 OLA1Q9NTK5 396 aaKnown RBP12.61□□□□□ -0.39
BDNF-218ENST00000533246 PDHXO00330 501 aa12.61□□□□□ -0.39
BDNF-218ENST00000533246 ZNF862O60290 1169 aa12.61□□□□□ -0.39
BDNF-218ENST00000533246 CCDC130P13994 396 aa12.61□□□□□ -0.39
BDNF-218ENST00000533246 SERPINB9P50453 376 aa12.61□□□□□ -0.39
BDNF-218ENST00000533246 JAG1P78504 1218 aa12.61□□□□□ -0.39
BDNF-218ENST00000533246 PHEXP78562 749 aa12.61□□□□□ -0.39
BDNF-218ENST00000533246 C10orf120Q5SQS8 335 aa12.61□□□□□ -0.39
BDNF-218ENST00000533246 HYIQ5T013 277 aa12.61□□□□□ -0.39
BDNF-218ENST00000533246 C16orf46Q6P387 395 aa12.61□□□□□ -0.39
BDNF-218ENST00000533246 KCNT2Q6UVM3 1135 aa12.61□□□□□ -0.39
BDNF-218ENST00000533246 SLC26A11Q86WA9 606 aa12.61□□□□□ -0.39
BDNF-218ENST00000533246 POU5F2Q8N7G0 328 aa12.61□□□□□ -0.39
BDNF-218ENST00000533246 COLGALT1Q8NBJ5 622 aa12.61□□□□□ -0.39
BDNF-218ENST00000533246 PRCCQ92733 491 aaPredicted RBP12.61□□□□□ -0.39
BDNF-218ENST00000533246 PGLYRP2Q96PD5 576 aa12.61□□□□□ -0.39
BDNF-218ENST00000533246 MROH8Q9H579 483 aa12.61□□□□□ -0.39
BDNF-218ENST00000533246 DDX18Q9NVP1 670 aaKnown RBP12.61□□□□□ -0.39
BDNF-218ENST00000533246 WRAP73Q9P2S5 460 aaPredicted RBP12.61□□□□□ -0.39
BDNF-218ENST00000533246 MTO1Q9Y2Z2 717 aaKnown RBP12.61□□□□□ -0.39
BDNF-218ENST00000533246 LSM8O95777 96 aaKnown RBP12.61□□□□□ -0.39
BDNF-218ENST00000533246 CD151P48509 253 aa12.61□□□□□ -0.39
BDNF-218ENST00000533246 EIF2B2P49770 351 aaKnown RBP12.61□□□□□ -0.39
BDNF-218ENST00000533246 RRP1BQ14684 758 aaKnown RBP12.61□□□□□ -0.39
BDNF-218ENST00000533246 FKBP1CQ5VVH2 108 aa12.61□□□□□ -0.39
BDNF-218ENST00000533246 DUPD1Q68J44 220 aa12.61□□□□□ -0.39
BDNF-218ENST00000533246 PPHLN1Q8NEY8 458 aaKnown RBP12.61□□□□□ -0.39
BDNF-218ENST00000533246 RAET1EQ8TD07 263 aa12.61□□□□□ -0.39
BDNF-218ENST00000533246 BLOC1S5Q8TDH9 187 aa12.61□□□□□ -0.39
BDNF-218ENST00000533246 RPRD1AQ96P16 312 aaPredicted RBP12.61□□□□□ -0.39
BDNF-218ENST00000533246 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.61□□□□□ -0.39
BDNF-218ENST00000533246 UMODL1Q5DID0 1318 aa12.61□□□□□ -0.39
BDNF-218ENST00000533246 IGLV3-22A0A075B6J6 115 aa12.6□□□□□ -0.39
BDNF-218ENST00000533246 SDR42E2A6NKP2 422 aa12.6□□□□□ -0.39
BDNF-218ENST00000533246 E9PBE3 544 aa12.6□□□□□ -0.39
BDNF-218ENST00000533246 KLHL41O60662 606 aa12.6□□□□□ -0.39
BDNF-218ENST00000533246 NME5P56597 212 aa12.6□□□□□ -0.39
BDNF-218ENST00000533246 POU6F1Q14863 301 aa12.6□□□□□ -0.39
BDNF-218ENST00000533246 CATSPERGQ6ZRH7 1159 aa12.6□□□□□ -0.39
BDNF-218ENST00000533246 ZNF554Q86TJ5 538 aa12.6□□□□□ -0.39
BDNF-218ENST00000533246 DEFB106AQ8N104 65 aa12.6□□□□□ -0.39
BDNF-218ENST00000533246 RNF148Q8N7C7 305 aa12.6□□□□□ -0.39
BDNF-218ENST00000533246 MAGEB18Q96M61 343 aa12.6□□□□□ -0.39
BDNF-218ENST00000533246 DNAJC16Q9Y2G8 782 aa12.6□□□□□ -0.39
BDNF-218ENST00000533246 SPAG6O75602 509 aa12.6□□□□□ -0.39
BDNF-218ENST00000533246 SERPINB5P36952 375 aa12.6□□□□□ -0.39
BDNF-218ENST00000533246 RECQLP46063 649 aaPredicted RBP12.6□□□□□ -0.39
BDNF-218ENST00000533246 NCCRP1Q6ZVX7 275 aaPredicted RBP12.6□□□□□ -0.39
BDNF-218ENST00000533246 TFAP2DQ7Z6R9 452 aa12.6□□□□□ -0.39
BDNF-218ENST00000533246 SLC9A9Q8IVB4 645 aa12.6□□□□□ -0.39
BDNF-218ENST00000533246 AVENQ9NQS1 362 aaPredicted RBP12.6□□□□□ -0.39
BDNF-218ENST00000533246 IARS2Q9NSE4 1012 aaKnown RBP12.6□□□□□ -0.39
BDNF-218ENST00000533246 PDP2Q9P2J9 529 aa12.6□□□□□ -0.39
BDNF-218ENST00000533246 O00370 1275 aa12.6□□□□□ -0.39
BDNF-218ENST00000533246 BCAT1P54687 386 aa12.6□□□□□ -0.39
BDNF-218ENST00000533246 CAPRIN1Q14444 709 aaKnown RBP12.6□□□□□ -0.39
BDNF-218ENST00000533246 SGO1Q5FBB7 561 aa12.6□□□□□ -0.39
BDNF-218ENST00000533246 SZRD1Q7Z422 152 aa12.6□□□□□ -0.39
BDNF-218ENST00000533246 PLEKHH3Q7Z736 793 aa12.6□□□□□ -0.39
BDNF-218ENST00000533246 STRA8Q7Z7C7 330 aa12.6□□□□□ -0.39
BDNF-218ENST00000533246 LATS2Q9NRM7 1088 aa12.6□□□□□ -0.39
BDNF-218ENST00000533246 THEGQ9P2T0 379 aa12.6□□□□□ -0.39
BDNF-218ENST00000533246 MOSPD1Q9UJG1 213 aa12.6□□□□□ -0.39
BDNF-218ENST00000533246 GHRP10912 638 aa12.59□□□□□ -0.39
BDNF-218ENST00000533246 IMPG1Q17R60 797 aa12.59□□□□□ -0.39
BDNF-218ENST00000533246 ISLR2Q6UXK2 745 aa12.59□□□□□ -0.39
BDNF-218ENST00000533246 ZBTB8BQ8NAP8 495 aaPredicted RBP12.59□□□□□ -0.39
BDNF-218ENST00000533246 PGM2Q96G03 612 aa12.59□□□□□ -0.39
BDNF-218ENST00000533246 CDT1Q9H211 546 aa12.59□□□□□ -0.39
BDNF-218ENST00000533246 PTPRHQ9HD43 1115 aa12.59□□□□□ -0.39
BDNF-218ENST00000533246 DDX43Q9NXZ2 648 aaKnown RBP12.59□□□□□ -0.39
BDNF-218ENST00000533246 CACNA1FO60840 1977 aa12.59□□□□□ -0.39
BDNF-218ENST00000533246 AVILO75366 819 aa12.59□□□□□ -0.39
BDNF-218ENST00000533246 RASSF9O75901 435 aa12.59□□□□□ -0.39
BDNF-218ENST00000533246 RECQL4O94761 1208 aa12.59□□□□□ -0.39
BDNF-218ENST00000533246 SUPT7LO94864 414 aa12.59□□□□□ -0.39
BDNF-218ENST00000533246 RPA3P35244 121 aaPredicted RBP12.59□□□□□ -0.39
BDNF-218ENST00000533246 RALGDSQ12967 914 aa12.59□□□□□ -0.39
BDNF-218ENST00000533246 ITGA9Q13797 1035 aa12.59□□□□□ -0.39
BDNF-218ENST00000533246 BMT2Q1RMZ1 405 aa12.59□□□□□ -0.39
BDNF-218ENST00000533246 JOSD2Q8TAC2 188 aa12.59□□□□□ -0.39
BDNF-218ENST00000533246 UBE2OQ9C0C9 1292 aaKnown RBP12.59□□□□□ -0.39
BDNF-218ENST00000533246 WARS2Q9UGM6 360 aaKnown RBP12.59□□□□□ -0.39
BDNF-218ENST00000533246 C17orf102A2RUQ5 167 aa12.59□□□□□ -0.39
BDNF-218ENST00000533246 SPDYE5A6NIY4 337 aa12.59□□□□□ -0.39
BDNF-218ENST00000533246 SCAMP3O14828 347 aaKnown RBP12.59□□□□□ -0.39
BDNF-218ENST00000533246 EGFRP00533 1210 aa12.59□□□□□ -0.39
BDNF-218ENST00000533246 NOMO3P69849 1222 aa12.59□□□□□ -0.39
BDNF-218ENST00000533246 CDC42EP1Q00587 391 aa12.59□□□□□ -0.39
BDNF-218ENST00000533246 PDAP1Q13442 181 aaKnown RBP12.59□□□□□ -0.39
BDNF-218ENST00000533246 ERMARDQ5T6L9 678 aa12.59□□□□□ -0.39
BDNF-218ENST00000533246 YTHDF3Q7Z739 585 aaKnown RBP12.59□□□□□ -0.39
BDNF-218ENST00000533246 EXOC3L1Q86VI1 746 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms