RNA–Protein interactions for RNA: ENST00000533096.5

COPB1-209, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-209ENST00000533096 KIAA1522Q9P206 1035 aaPredicted RBP13.72□□□□□ -0.21
COPB1-209ENST00000533096 RASAL2Q9UJF2 1139 aa13.72□□□□□ -0.21
COPB1-209ENST00000533096 SCML2Q9UQR0 700 aa13.72□□□□□ -0.21
COPB1-209ENST00000533096 BTBD3Q9Y2F9 522 aa13.72□□□□□ -0.21
COPB1-209ENST00000533096 TCHHQ07283 1943 aa13.72□□□□□ -0.21
COPB1-209ENST00000533096 LRRIQ3A6PVS8 624 aaPredicted RBP13.71□□□□□ -0.21
COPB1-209ENST00000533096 STC2O76061 302 aa13.71□□□□□ -0.21
COPB1-209ENST00000533096 VNN1O95497 513 aa13.71□□□□□ -0.21
COPB1-209ENST00000533096 CER1O95813 267 aa13.71□□□□□ -0.21
COPB1-209ENST00000533096 EPHX1P07099 455 aa13.71□□□□□ -0.21
COPB1-209ENST00000533096 AFMP43652 599 aa13.71□□□□□ -0.21
COPB1-209ENST00000533096 DLG4P78352 724 aa13.71□□□□□ -0.21
COPB1-209ENST00000533096 EFEMP1Q12805 493 aa13.71□□□□□ -0.21
COPB1-209ENST00000533096 ZNF234Q14588 700 aa13.71□□□□□ -0.21
COPB1-209ENST00000533096 BMT2Q1RMZ1 405 aa13.71□□□□□ -0.21
COPB1-209ENST00000533096 IL27RAQ6UWB1 636 aa13.71□□□□□ -0.21
COPB1-209ENST00000533096 GLRX5Q86SX6 157 aa13.71□□□□□ -0.21
COPB1-209ENST00000533096 METTL3Q86U44 580 aaKnown RBP13.71□□□□□ -0.21
COPB1-209ENST00000533096 DENND1CQ8IV53 801 aa13.71□□□□□ -0.21
COPB1-209ENST00000533096 IQUBQ8NA54 791 aa13.71□□□□□ -0.21
COPB1-209ENST00000533096 DUSP9Q99956 384 aaKnown RBP13.71□□□□□ -0.21
COPB1-209ENST00000533096 CSNK1G1Q9HCP0 422 aa13.71□□□□□ -0.21
COPB1-209ENST00000533096 CYLDQ9NQC7 956 aa13.71□□□□□ -0.21
COPB1-209ENST00000533096 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.71□□□□□ -0.21
COPB1-209ENST00000533096 ELOVL2Q9NXB9 296 aa13.71□□□□□ -0.21
COPB1-209ENST00000533096 THAP10Q9P2Z0 257 aaPredicted RBP13.71□□□□□ -0.21
COPB1-209ENST00000533096 CLEC4EQ9ULY5 219 aa13.71□□□□□ -0.21
COPB1-209ENST00000533096 SNX11Q9Y5W9 270 aa13.71□□□□□ -0.21
COPB1-209ENST00000533096 NUP205Q92621 2012 aa13.7□□□□□ -0.22
COPB1-209ENST00000533096 TSPAN3O60637 253 aa13.7□□□□□ -0.22
COPB1-209ENST00000533096 RALAP11233 206 aa13.7□□□□□ -0.22
COPB1-209ENST00000533096 HLA-EP13747 358 aa13.7□□□□□ -0.22
COPB1-209ENST00000533096 PRKCHP24723 683 aa13.7□□□□□ -0.22
COPB1-209ENST00000533096 MFAP3P55082 362 aa13.7□□□□□ -0.22
COPB1-209ENST00000533096 SNRPFP62306 86 aaKnown RBP13.7□□□□□ -0.22
COPB1-209ENST00000533096 KNOP1Q1ED39 458 aaKnown RBP13.7□□□□□ -0.22
COPB1-209ENST00000533096 KIF19Q2TAC6 998 aa13.7□□□□□ -0.22
COPB1-209ENST00000533096 FOXD4L6Q3SYB3 417 aaPredicted RBP13.7□□□□□ -0.22
COPB1-209ENST00000533096 PRAMEF14Q5SWL7 426 aa13.7□□□□□ -0.22
COPB1-209ENST00000533096 FOXD4L5Q5VV16 416 aaPredicted RBP13.7□□□□□ -0.22
COPB1-209ENST00000533096 ERICH6BQ5W0A0 696 aa13.7□□□□□ -0.22
COPB1-209ENST00000533096 FOXD4L3Q6VB84 417 aaPredicted RBP13.7□□□□□ -0.22
COPB1-209ENST00000533096 SCD5Q86SK9 330 aa13.7□□□□□ -0.22
COPB1-209ENST00000533096 PARD3BQ8TEW8 1205 aa13.7□□□□□ -0.22
COPB1-209ENST00000533096 DDI1Q8WTU0 396 aa13.7□□□□□ -0.22
COPB1-209ENST00000533096 FOXD4L4Q8WXT5 416 aaPredicted RBP13.7□□□□□ -0.22
COPB1-209ENST00000533096 C7orf25Q9BPX7 421 aa13.7□□□□□ -0.22
COPB1-209ENST00000533096 USP36Q9P275 1121 aaKnown RBP13.7□□□□□ -0.22
COPB1-209ENST00000533096 FBXO10Q9UK96 956 aa13.7□□□□□ -0.22
COPB1-209ENST00000533096 SLCO1B1Q9Y6L6 691 aa13.7□□□□□ -0.22
COPB1-209ENST00000533096 ZFYVE26Q68DK2 2539 aa13.7□□□□□ -0.22
COPB1-209ENST00000533096 ASCC3Q8N3C0 2202 aaKnown RBP13.7□□□□□ -0.22
COPB1-209ENST00000533096 HHLA1C9JL84 531 aa13.69□□□□□ -0.22
COPB1-209ENST00000533096 SPTLC2O15270 562 aa13.69□□□□□ -0.22
COPB1-209ENST00000533096 POLR2DO15514 142 aaKnown RBP13.69□□□□□ -0.22
COPB1-209ENST00000533096 FSBPO95073 299 aa13.69□□□□□ -0.22
COPB1-209ENST00000533096 CYBBP04839 570 aa13.69□□□□□ -0.22
COPB1-209ENST00000533096 CD58P19256 250 aa13.69□□□□□ -0.22
COPB1-209ENST00000533096 TRIM21P19474 475 aaKnown RBP13.69□□□□□ -0.22
COPB1-209ENST00000533096 CHKAP35790 457 aa13.69□□□□□ -0.22
COPB1-209ENST00000533096 AP3M2P53677 418 aa13.69□□□□□ -0.22
COPB1-209ENST00000533096 IL9RQ01113 521 aa13.69□□□□□ -0.22
COPB1-209ENST00000533096 E2F4Q16254 413 aa13.69□□□□□ -0.22
COPB1-209ENST00000533096 FYB2Q5VWT5 728 aa13.69□□□□□ -0.22
COPB1-209ENST00000533096 LAYNQ6UX15 382 aa13.69□□□□□ -0.22
COPB1-209ENST00000533096 SERPINA13PQ6UXR4 307 aa13.69□□□□□ -0.22
COPB1-209ENST00000533096 Q6ZNB5 142 aa13.69□□□□□ -0.22
COPB1-209ENST00000533096 CLEC20AQ6ZU45 233 aa13.69□□□□□ -0.22
COPB1-209ENST00000533096 UNC13DQ70J99 1090 aa13.69□□□□□ -0.22
COPB1-209ENST00000533096 UNC93AQ86WB7 457 aa13.69□□□□□ -0.22
COPB1-209ENST00000533096 ZNF366Q8N895 744 aa13.69□□□□□ -0.22
COPB1-209ENST00000533096 TWNKQ96RR1 684 aa13.69□□□□□ -0.22
COPB1-209ENST00000533096 HNRNPABQ99729 332 aaKnown RBP13.69□□□□□ -0.22
COPB1-209ENST00000533096 CUEDC2Q9H467 287 aa13.69□□□□□ -0.22
COPB1-209ENST00000533096 C6orf106Q9H6K1 298 aaPredicted RBP13.69□□□□□ -0.22
COPB1-209ENST00000533096 VRTNQ9H8Y1 702 aa13.69□□□□□ -0.22
COPB1-209ENST00000533096 TOR4AQ9NXH8 423 aa13.69□□□□□ -0.22
COPB1-209ENST00000533096 ANKRD6Q9Y2G4 727 aa13.69□□□□□ -0.22
COPB1-209ENST00000533096 ZNF510Q9Y2H8 683 aa13.69□□□□□ -0.22
COPB1-209ENST00000533096 SLC27A6Q9Y2P4 619 aa13.69□□□□□ -0.22
COPB1-209ENST00000533096 GON4LQ3T8J9 2241 aa13.69□□□□□ -0.22
COPB1-209ENST00000533096 OBSL1O75147 1896 aa13.69□□□□□ -0.22
COPB1-209ENST00000533096 DENND4CQ5VZ89 1909 aa13.68□□□□□ -0.22
COPB1-209ENST00000533096 ASPMQ8IZT6 3477 aa13.68□□□□□ -0.22
COPB1-209ENST00000533096 SLC12A8A0AV02 714 aa13.68□□□□□ -0.22
COPB1-209ENST00000533096 FLRT2O43155 660 aa13.68□□□□□ -0.22
COPB1-209ENST00000533096 STX6O43752 255 aa13.68□□□□□ -0.22
COPB1-209ENST00000533096 PRB1P04280 392 aa13.68□□□□□ -0.22
COPB1-209ENST00000533096 RPN1P04843 607 aaKnown RBP13.68□□□□□ -0.22
COPB1-209ENST00000533096 CORO1AP31146 461 aaKnown RBP13.68□□□□□ -0.22
COPB1-209ENST00000533096 ACSL1P33121 698 aa13.68□□□□□ -0.22
COPB1-209ENST00000533096 AFF3P51826 1226 aaKnown RBP13.68□□□□□ -0.22
COPB1-209ENST00000533096 COPAP53621 1224 aa13.68□□□□□ -0.22
COPB1-209ENST00000533096 COG7P83436 770 aa13.68□□□□□ -0.22
COPB1-209ENST00000533096 CUL4AQ13619 759 aa13.68□□□□□ -0.22
COPB1-209ENST00000533096 CUL4BQ13620 913 aa13.68□□□□□ -0.22
COPB1-209ENST00000533096 TEAD4Q15561 434 aa13.68□□□□□ -0.22
COPB1-209ENST00000533096 ZNF394Q53GI3 561 aa13.68□□□□□ -0.22
COPB1-209ENST00000533096 CEP135Q66GS9 1140 aa13.68□□□□□ -0.22
COPB1-209ENST00000533096 DHRS13Q6UX07 377 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms