RNA–Protein interactions for RNA: ENST00000531857.1

PKP3-208, Transcript of plakophilin 3, humanhuman

TSL 4

Gene PKP3, Length 687 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-208ENST00000531857 ZACNQ401N2 412 aa18.24■□□□□ 0.51
PKP3-208ENST00000531857 SYCP2LQ5T4T6 812 aa18.24■□□□□ 0.51
PKP3-208ENST00000531857 UNC93AQ86WB7 457 aa18.24■□□□□ 0.51
PKP3-208ENST00000531857 PROSER1Q86XN7 944 aa18.24■□□□□ 0.51
PKP3-208ENST00000531857 MAGEF1Q9HAY2 307 aa18.24■□□□□ 0.51
PKP3-208ENST00000531857 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.24■□□□□ 0.51
PKP3-208ENST00000531857 FBXO10Q9UK96 956 aa18.24■□□□□ 0.51
PKP3-208ENST00000531857 GFRA2O00451 464 aa18.23■□□□□ 0.51
PKP3-208ENST00000531857 STC2O76061 302 aa18.23■□□□□ 0.51
PKP3-208ENST00000531857 YEATS4O95619 227 aa18.23■□□□□ 0.51
PKP3-208ENST00000531857 ASS1P00966 412 aaKnown RBP18.23■□□□□ 0.51
PKP3-208ENST00000531857 KLKB1P03952 638 aa18.23■□□□□ 0.51
PKP3-208ENST00000531857 FTH1P19P0C7X4 201 aa18.23■□□□□ 0.51
PKP3-208ENST00000531857 P4HA1P13674 534 aa18.23■□□□□ 0.51
PKP3-208ENST00000531857 CD6P30203 668 aa18.23■□□□□ 0.51
PKP3-208ENST00000531857 SCAPQ12770 1279 aa18.23■□□□□ 0.51
PKP3-208ENST00000531857 STK4Q13043 487 aa18.23■□□□□ 0.51
PKP3-208ENST00000531857 GSE1Q14687 1217 aa18.23■□□□□ 0.51
PKP3-208ENST00000531857 FUT11Q495W5 492 aa18.23■□□□□ 0.51
PKP3-208ENST00000531857 SV2AQ7L0J3 742 aa18.23■□□□□ 0.51
PKP3-208ENST00000531857 SCD5Q86SK9 330 aa18.23■□□□□ 0.51
PKP3-208ENST00000531857 NAXDQ8IW45 347 aa18.23■□□□□ 0.51
PKP3-208ENST00000531857 KIAA0895Q8NCT3 520 aa18.23■□□□□ 0.51
PKP3-208ENST00000531857 GOLGA5Q8TBA6 731 aa18.23■□□□□ 0.51
PKP3-208ENST00000531857 ADAMTS14Q8WXS8 1223 aa18.23■□□□□ 0.51
PKP3-208ENST00000531857 FOXJ1Q92949 421 aa18.23■□□□□ 0.51
PKP3-208ENST00000531857 TOE1Q96GM8 510 aaKnown RBP18.23■□□□□ 0.51
PKP3-208ENST00000531857 ZNF396Q96N95 335 aaPredicted RBP18.23■□□□□ 0.51
PKP3-208ENST00000531857 HNRNPABQ99729 332 aaKnown RBP18.23■□□□□ 0.51
PKP3-208ENST00000531857 MKRN2Q9H000 416 aaKnown RBP18.23■□□□□ 0.51
PKP3-208ENST00000531857 PRDM16Q9HAZ2 1276 aa18.23■□□□□ 0.51
PKP3-208ENST00000531857 SUSD2Q9UGT4 822 aa18.23■□□□□ 0.51
PKP3-208ENST00000531857 DNMT3LQ9UJW3 386 aa18.23■□□□□ 0.51
PKP3-208ENST00000531857 PCDHB9Q9Y5E1 797 aa18.23■□□□□ 0.51
PKP3-208ENST00000531857 FASNP49327 2511 aaKnown RBP18.23■□□□□ 0.51
PKP3-208ENST00000531857 NUMA1Q14980 2115 aa18.22■□□□□ 0.51
PKP3-208ENST00000531857 KCNJ18B7U540 433 aa18.22■□□□□ 0.51
PKP3-208ENST00000531857 KLRC4O43908 158 aa18.22■□□□□ 0.51
PKP3-208ENST00000531857 RPN1P04843 607 aaKnown RBP18.22■□□□□ 0.51
PKP3-208ENST00000531857 GNSP15586 552 aa18.22■□□□□ 0.51
PKP3-208ENST00000531857 IL12RB1P42701 662 aa18.22■□□□□ 0.51
PKP3-208ENST00000531857 PLA2G4AP47712 749 aa18.22■□□□□ 0.51
PKP3-208ENST00000531857 GEN1Q17RS7 908 aa18.22■□□□□ 0.51
PKP3-208ENST00000531857 WDR45BQ5MNZ6 344 aa18.22■□□□□ 0.51
PKP3-208ENST00000531857 C10orf120Q5SQS8 335 aa18.22■□□□□ 0.51
PKP3-208ENST00000531857 C1orf220Q5T0J3 134 aa18.22■□□□□ 0.51
PKP3-208ENST00000531857 FOXD4L5Q5VV16 416 aaPredicted RBP18.22■□□□□ 0.51
PKP3-208ENST00000531857 KLHDC10Q6PID8 442 aa18.22■□□□□ 0.51
PKP3-208ENST00000531857 SLC9A9Q8IVB4 645 aa18.22■□□□□ 0.51
PKP3-208ENST00000531857 FOXD4L4Q8WXT5 416 aaPredicted RBP18.22■□□□□ 0.51
PKP3-208ENST00000531857 DNASE2BQ8WZ79 361 aa18.22■□□□□ 0.51
PKP3-208ENST00000531857 CYFIP2Q96F07 1278 aa18.22■□□□□ 0.51
PKP3-208ENST00000531857 GPR174Q9BXC1 333 aa18.22■□□□□ 0.51
PKP3-208ENST00000531857 KCTD10Q9H3F6 313 aa18.22■□□□□ 0.51
PKP3-208ENST00000531857 ITM2CQ9NQX7 267 aa18.22■□□□□ 0.51
PKP3-208ENST00000531857 WSB2Q9NYS7 404 aaPredicted RBP18.22■□□□□ 0.51
PKP3-208ENST00000531857 USP36Q9P275 1121 aaKnown RBP18.22■□□□□ 0.51
PKP3-208ENST00000531857 TP53BP1Q12888 1972 aaPredicted RBP18.21■□□□□ 0.51
PKP3-208ENST00000531857 PENKP01210 267 aaPredicted RBP18.21■□□□□ 0.51
PKP3-208ENST00000531857 HLA-DRAP01903 254 aa18.21■□□□□ 0.51
PKP3-208ENST00000531857 MFAP3P55082 362 aa18.21■□□□□ 0.51
PKP3-208ENST00000531857 ACAP1Q15027 740 aa18.21■□□□□ 0.51
PKP3-208ENST00000531857 FOXD4L6Q3SYB3 417 aaPredicted RBP18.21■□□□□ 0.51
PKP3-208ENST00000531857 FYB2Q5VWT5 728 aa18.21■□□□□ 0.51
PKP3-208ENST00000531857 FOXD4L3Q6VB84 417 aaPredicted RBP18.21■□□□□ 0.51
PKP3-208ENST00000531857 METTL3Q86U44 580 aaKnown RBP18.21■□□□□ 0.51
PKP3-208ENST00000531857 SLCO6A1Q86UG4 719 aa18.21■□□□□ 0.51
PKP3-208ENST00000531857 ZCCHC9Q8N567 271 aaKnown RBP18.21■□□□□ 0.51
PKP3-208ENST00000531857 TAF4BQ92750 862 aa18.21■□□□□ 0.51
PKP3-208ENST00000531857 IL21RQ9HBE5 538 aa18.21■□□□□ 0.51
PKP3-208ENST00000531857 THAP10Q9P2Z0 257 aaPredicted RBP18.21■□□□□ 0.51
PKP3-208ENST00000531857 NAGPAQ9UK23 515 aa18.21■□□□□ 0.51
PKP3-208ENST00000531857 SLC27A6Q9Y2P4 619 aa18.21■□□□□ 0.51
PKP3-208ENST00000531857 PCDHA5Q9Y5H7 936 aa18.21■□□□□ 0.51
PKP3-208ENST00000531857 LAMA5O15230 3695 aa18.2■□□□□ 0.5
PKP3-208ENST00000531857 A0A1B0GTW7 788 aa18.2■□□□□ 0.5
PKP3-208ENST00000531857 MEI4A8MW99 385 aa18.2■□□□□ 0.5
PKP3-208ENST00000531857 CBFA2T3O75081 653 aa18.2■□□□□ 0.5
PKP3-208ENST00000531857 NR3C1P04150 777 aa18.2■□□□□ 0.5
PKP3-208ENST00000531857 NCAM1P13591 858 aa18.2■□□□□ 0.5
PKP3-208ENST00000531857 PIK3CAP42336 1068 aa18.2■□□□□ 0.5
PKP3-208ENST00000531857 KIF11P52732 1056 aa18.2■□□□□ 0.5
PKP3-208ENST00000531857 INCA1Q0VD86 236 aa18.2■□□□□ 0.5
PKP3-208ENST00000531857 ENPP2Q13822 863 aa18.2■□□□□ 0.5
PKP3-208ENST00000531857 STARD3Q14849 445 aa18.2■□□□□ 0.5
PKP3-208ENST00000531857 C19orf48Q6RUI8 117 aa18.2■□□□□ 0.5
PKP3-208ENST00000531857 TMC2Q8TDI7 906 aa18.2■□□□□ 0.5
PKP3-208ENST00000531857 TMEM174Q8WUU8 243 aa18.2■□□□□ 0.5
PKP3-208ENST00000531857 MIR1-1HGQ9H1L0 117 aa18.2■□□□□ 0.5
PKP3-208ENST00000531857 APOBEC3GQ9HC16 384 aaKnown RBP18.2■□□□□ 0.5
PKP3-208ENST00000531857 SERTAD1Q9UHV2 236 aa18.2■□□□□ 0.5
PKP3-208ENST00000531857 CLEC4EQ9ULY5 219 aa18.2■□□□□ 0.5
PKP3-208ENST00000531857 PCDHA7Q9UN72 937 aa18.2■□□□□ 0.5
PKP3-208ENST00000531857 GPSM3Q9Y4H4 160 aa18.2■□□□□ 0.5
PKP3-208ENST00000531857 HMBSP08397 361 aa18.19■□□□□ 0.5
PKP3-208ENST00000531857 TPMTP51580 245 aa18.19■□□□□ 0.5
PKP3-208ENST00000531857 BNC1Q01954 994 aa18.19■□□□□ 0.5
PKP3-208ENST00000531857 DCAF12L1Q5VU92 463 aa18.19■□□□□ 0.5
PKP3-208ENST00000531857 RESP18Q5W5W9 173 aa18.19■□□□□ 0.5
PKP3-208ENST00000531857 CEP135Q66GS9 1140 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms