RNA–Protein interactions for RNA: ENST00000531405.5

SSSCA1-206, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSSCA1, Length 879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-206ENST00000531405 KIF11P52732 1056 aa19.39■□□□□ 0.69
SSSCA1-206ENST00000531405 SIM1P81133 766 aaPredicted RBP19.39■□□□□ 0.69
SSSCA1-206ENST00000531405 HSCBQ8IWL3 235 aa19.39■□□□□ 0.69
SSSCA1-206ENST00000531405 HDDC3Q8N4P3 179 aa19.39■□□□□ 0.69
SSSCA1-206ENST00000531405 MINDY1Q8N5J2 469 aa19.39■□□□□ 0.69
SSSCA1-206ENST00000531405 KDF1Q8NAX2 398 aaPredicted RBP19.39■□□□□ 0.69
SSSCA1-206ENST00000531405 MRGPRX1Q96LB2 322 aa19.39■□□□□ 0.69
SSSCA1-206ENST00000531405 IMPG2Q9BZV3 1241 aa19.39■□□□□ 0.69
SSSCA1-206ENST00000531405 MAPK8IP1Q9UQF2 711 aa19.39■□□□□ 0.69
SSSCA1-206ENST00000531405 TRAF3IP3Q9Y228 551 aa19.39■□□□□ 0.69
SSSCA1-206ENST00000531405 ITPR1Q14643 2758 aa19.39■□□□□ 0.69
SSSCA1-206ENST00000531405 NUMA1Q14980 2115 aa19.39■□□□□ 0.69
SSSCA1-206ENST00000531405 CILPO75339 1184 aa19.38■□□□□ 0.69
SSSCA1-206ENST00000531405 KLKB1P03952 638 aa19.38■□□□□ 0.69
SSSCA1-206ENST00000531405 TRIM21P19474 475 aaKnown RBP19.38■□□□□ 0.69
SSSCA1-206ENST00000531405 NR2F2P24468 414 aa19.38■□□□□ 0.69
SSSCA1-206ENST00000531405 PLA2G4AP47712 749 aa19.38■□□□□ 0.69
SSSCA1-206ENST00000531405 FAM193AP78312 1265 aa19.38■□□□□ 0.69
SSSCA1-206ENST00000531405 ZNF394Q53GI3 561 aa19.38■□□□□ 0.69
SSSCA1-206ENST00000531405 PPP1R26Q5T8A7 1209 aaPredicted RBP19.38■□□□□ 0.69
SSSCA1-206ENST00000531405 KLHDC10Q6PID8 442 aa19.38■□□□□ 0.69
SSSCA1-206ENST00000531405 KIAA1324Q6UXG2 1013 aaKnown RBP19.38■□□□□ 0.69
SSSCA1-206ENST00000531405 TMEM131Q92545 1883 aa19.38■□□□□ 0.69
SSSCA1-206ENST00000531405 NIF3L1Q9GZT8 377 aa19.38■□□□□ 0.69
SSSCA1-206ENST00000531405 CYP3A43Q9HB55 503 aa19.38■□□□□ 0.69
SSSCA1-206ENST00000531405 PNPLA8Q9NP80 782 aa19.38■□□□□ 0.69
SSSCA1-206ENST00000531405 KLK13Q9UKR3 277 aa19.38■□□□□ 0.69
SSSCA1-206ENST00000531405 TP53BP1Q12888 1972 aaPredicted RBP19.37■□□□□ 0.69
SSSCA1-206ENST00000531405 ARHGAP33O14559 1287 aa19.37■□□□□ 0.69
SSSCA1-206ENST00000531405 OPHN1O60890 802 aa19.37■□□□□ 0.69
SSSCA1-206ENST00000531405 HMBSP08397 361 aa19.37■□□□□ 0.69
SSSCA1-206ENST00000531405 CMA1P23946 247 aa19.37■□□□□ 0.69
SSSCA1-206ENST00000531405 CCDC186Q7Z3E2 898 aa19.37■□□□□ 0.69
SSSCA1-206ENST00000531405 RGL4Q8IZJ4 473 aa19.37■□□□□ 0.69
SSSCA1-206ENST00000531405 DUSP16Q9BY84 665 aa19.37■□□□□ 0.69
SSSCA1-206ENST00000531405 RASAL2Q9UJF2 1139 aa19.37■□□□□ 0.69
SSSCA1-206ENST00000531405 HPSEQ9Y251 543 aa19.37■□□□□ 0.69
SSSCA1-206ENST00000531405 STON1Q9Y6Q2 735 aa19.37■□□□□ 0.69
SSSCA1-206ENST00000531405 PTPRBP23467 1997 aa19.37■□□□□ 0.69
SSSCA1-206ENST00000531405 PLXNB3Q9ULL4 1909 aa19.36■□□□□ 0.69
SSSCA1-206ENST00000531405 UPK3BL1B0FP48 263 aa19.36■□□□□ 0.69
SSSCA1-206ENST00000531405 UPK3BL2E5RIL1 263 aa19.36■□□□□ 0.69
SSSCA1-206ENST00000531405 MAPK13O15264 365 aa19.36■□□□□ 0.69
SSSCA1-206ENST00000531405 NDUFS2O75306 463 aa19.36■□□□□ 0.69
SSSCA1-206ENST00000531405 MAOBP27338 520 aa19.36■□□□□ 0.69
SSSCA1-206ENST00000531405 EFEMP1Q12805 493 aa19.36■□□□□ 0.69
SSSCA1-206ENST00000531405 GEN1Q17RS7 908 aa19.36■□□□□ 0.69
SSSCA1-206ENST00000531405 INTS8Q75QN2 995 aaKnown RBP19.36■□□□□ 0.69
SSSCA1-206ENST00000531405 RABEPKQ7Z6M1 372 aa19.36■□□□□ 0.69
SSSCA1-206ENST00000531405 FAM186BQ8IYM0 893 aa19.36■□□□□ 0.69
SSSCA1-206ENST00000531405 ZNF419Q96HQ0 510 aaPredicted RBP19.36■□□□□ 0.69
SSSCA1-206ENST00000531405 USP25Q9UHP3 1055 aa19.36■□□□□ 0.69
SSSCA1-206ENST00000531405 FBXO10Q9UK96 956 aa19.36■□□□□ 0.69
SSSCA1-206ENST00000531405 USP3Q9Y6I4 520 aa19.36■□□□□ 0.69
SSSCA1-206ENST00000531405 KNL1Q8NG31 2342 aa19.36■□□□□ 0.69
SSSCA1-206ENST00000531405 LAMA5O15230 3695 aa19.36■□□□□ 0.69
SSSCA1-206ENST00000531405 A0A1W2PQD8 194 aa19.35■□□□□ 0.69
SSSCA1-206ENST00000531405 GFRA2O00451 464 aa19.35■□□□□ 0.69
SSSCA1-206ENST00000531405 PENKP01210 267 aaPredicted RBP19.35■□□□□ 0.69
SSSCA1-206ENST00000531405 MYL1P05976 194 aa19.35■□□□□ 0.69
SSSCA1-206ENST00000531405 RALAP11233 206 aa19.35■□□□□ 0.69
SSSCA1-206ENST00000531405 KRT13P13646 458 aa19.35■□□□□ 0.69
SSSCA1-206ENST00000531405 CD59P13987 128 aa19.35■□□□□ 0.69
SSSCA1-206ENST00000531405 CORO1AP31146 461 aaKnown RBP19.35■□□□□ 0.69
SSSCA1-206ENST00000531405 PSEN1P49768 467 aa19.35■□□□□ 0.69
SSSCA1-206ENST00000531405 MFAP3P55082 362 aa19.35■□□□□ 0.69
SSSCA1-206ENST00000531405 PLEKHG6Q3KR16 790 aa19.35■□□□□ 0.69
SSSCA1-206ENST00000531405 FUT11Q495W5 492 aa19.35■□□□□ 0.69
SSSCA1-206ENST00000531405 FYB2Q5VWT5 728 aa19.35■□□□□ 0.69
SSSCA1-206ENST00000531405 ZCCHC14Q8WYQ9 949 aaKnown RBP19.35■□□□□ 0.69
SSSCA1-206ENST00000531405 SEMA4DQ92854 862 aa19.35■□□□□ 0.69
SSSCA1-206ENST00000531405 CAMK1GQ96NX5 476 aa19.35■□□□□ 0.69
SSSCA1-206ENST00000531405 NEUROG3Q9Y4Z2 214 aa19.35■□□□□ 0.69
SSSCA1-206ENST00000531405 MUC22E2RYF6 1773 aaPredicted RBP19.34■□□□□ 0.69
SSSCA1-206ENST00000531405 TMEM8BA6NDV4 472 aa19.34■□□□□ 0.69
SSSCA1-206ENST00000531405 RHOBTB3O94955 611 aa19.34■□□□□ 0.69
SSSCA1-206ENST00000531405 IL12RB1P42701 662 aa19.34■□□□□ 0.69
SSSCA1-206ENST00000531405 NDUFA8P51970 172 aa19.34■□□□□ 0.69
SSSCA1-206ENST00000531405 NFIL3Q16649 462 aa19.34■□□□□ 0.69
SSSCA1-206ENST00000531405 TADA2BQ86TJ2 420 aa19.34■□□□□ 0.69
SSSCA1-206ENST00000531405 SPATA32Q96LK8 384 aa19.34■□□□□ 0.69
SSSCA1-206ENST00000531405 HEXIM2Q96MH2 286 aaKnown RBP19.34■□□□□ 0.69
SSSCA1-206ENST00000531405 MKRN2Q9H000 416 aaKnown RBP19.34■□□□□ 0.69
SSSCA1-206ENST00000531405 PRDM16Q9HAZ2 1276 aa19.34■□□□□ 0.69
SSSCA1-206ENST00000531405 TMEM8AQ9HCN3 771 aa19.34■□□□□ 0.69
SSSCA1-206ENST00000531405 DNAAF2Q9NVR5 837 aaKnown RBP19.34■□□□□ 0.69
SSSCA1-206ENST00000531405 CLIC5Q9NZA1 410 aa19.34■□□□□ 0.69
SSSCA1-206ENST00000531405 CLEC4EQ9ULY5 219 aa19.34■□□□□ 0.69
SSSCA1-206ENST00000531405 SLC27A6Q9Y2P4 619 aa19.34■□□□□ 0.69
SSSCA1-206ENST00000531405 BAHCC1Q9P281 2608 aa19.34■□□□□ 0.69
SSSCA1-206ENST00000531405 ATRXP46100 2492 aa19.33■□□□□ 0.69
SSSCA1-206ENST00000531405 SRRM3A6NNA2 597 aaPredicted RBP19.33■□□□□ 0.68
SSSCA1-206ENST00000531405 SYPP08247 313 aa19.33■□□□□ 0.68
SSSCA1-206ENST00000531405 CD6P30203 668 aa19.33■□□□□ 0.68
SSSCA1-206ENST00000531405 SYKP43405 635 aa19.33■□□□□ 0.68
SSSCA1-206ENST00000531405 DPYDQ12882 1025 aa19.33■□□□□ 0.68
SSSCA1-206ENST00000531405 STARD3Q14849 445 aa19.33■□□□□ 0.68
SSSCA1-206ENST00000531405 CACUL1Q86Y37 369 aa19.33■□□□□ 0.68
SSSCA1-206ENST00000531405 DENND1CQ8IV53 801 aa19.33■□□□□ 0.68
SSSCA1-206ENST00000531405 CHCHD4Q8N4Q1 142 aa19.33■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms