RNA–Protein interactions for RNA: ENST00000531104.1

SRPRA-205, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2

Gene SRPRA, Length 542 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-205ENST00000531104 TRIM66O15016 1216 aa11.34□□□□□ -0.59
SRPRA-205ENST00000531104 OPA1O60313 960 aa11.34□□□□□ -0.59
SRPRA-205ENST00000531104 NUDT17P0C025 328 aa11.34□□□□□ -0.59
SRPRA-205ENST00000531104 ZSCAN5DPP0CG00 497 aa11.34□□□□□ -0.59
SRPRA-205ENST00000531104 NCAM1P13591 858 aa11.34□□□□□ -0.59
SRPRA-205ENST00000531104 ETS1P14921 441 aa11.34□□□□□ -0.59
SRPRA-205ENST00000531104 ITGB8P26012 769 aa11.34□□□□□ -0.59
SRPRA-205ENST00000531104 STIP1P31948 543 aaKnown RBP11.34□□□□□ -0.59
SRPRA-205ENST00000531104 ADRA1BP35368 520 aa11.34□□□□□ -0.59
SRPRA-205ENST00000531104 GRIK1P39086 918 aa11.34□□□□□ -0.59
SRPRA-205ENST00000531104 HCAR3P49019 387 aa11.34□□□□□ -0.59
SRPRA-205ENST00000531104 PMS2P54278 862 aa11.34□□□□□ -0.59
SRPRA-205ENST00000531104 GDF10P55107 478 aa11.34□□□□□ -0.59
SRPRA-205ENST00000531104 C1QTNF8P60827 252 aa11.34□□□□□ -0.59
SRPRA-205ENST00000531104 CBLBQ13191 982 aa11.34□□□□□ -0.59
SRPRA-205ENST00000531104 GPR17Q13304 367 aa11.34□□□□□ -0.59
SRPRA-205ENST00000531104 XRCC4Q13426 336 aa11.34□□□□□ -0.59
SRPRA-205ENST00000531104 SLMAPQ14BN4 828 aa11.34□□□□□ -0.59
SRPRA-205ENST00000531104 RTP2Q5QGT7 225 aa11.34□□□□□ -0.59
SRPRA-205ENST00000531104 RNASEH2BQ5TBB1 312 aaKnown RBP11.34□□□□□ -0.59
SRPRA-205ENST00000531104 IZUMO3Q5VZ72 239 aa11.34□□□□□ -0.59
SRPRA-205ENST00000531104 RSPO2Q6UXX9 243 aaPredicted RBP11.34□□□□□ -0.59
SRPRA-205ENST00000531104 GSTA5Q7RTV2 222 aa11.34□□□□□ -0.59
SRPRA-205ENST00000531104 TAS1R1Q7RTX1 841 aa11.34□□□□□ -0.59
SRPRA-205ENST00000531104 PRUNE1Q86TP1 453 aa11.34□□□□□ -0.59
SRPRA-205ENST00000531104 TMEM173Q86WV6 379 aaPredicted RBP11.34□□□□□ -0.59
SRPRA-205ENST00000531104 UNC45BQ8IWX7 931 aa11.34□□□□□ -0.59
SRPRA-205ENST00000531104 SCAMP5Q8TAC9 235 aa11.34□□□□□ -0.59
SRPRA-205ENST00000531104 SLC7A14Q8TBB6 771 aa11.34□□□□□ -0.59
SRPRA-205ENST00000531104 C2orf15Q8WU43 125 aaKnown RBP11.34□□□□□ -0.59
SRPRA-205ENST00000531104 P3H4Q92791 437 aa11.34□□□□□ -0.59
SRPRA-205ENST00000531104 TOP1MTQ969P6 601 aa11.34□□□□□ -0.59
SRPRA-205ENST00000531104 TRIM43Q96BQ3 446 aaPredicted RBP11.34□□□□□ -0.59
SRPRA-205ENST00000531104 PAWRQ96IZ0 340 aaKnown RBP11.34□□□□□ -0.59
SRPRA-205ENST00000531104 PABPC3Q9H361 631 aaKnown RBP11.34□□□□□ -0.59
SRPRA-205ENST00000531104 ANLNQ9NQW6 1124 aa11.34□□□□□ -0.59
SRPRA-205ENST00000531104 TMEM51Q9NW97 253 aa11.34□□□□□ -0.59
SRPRA-205ENST00000531104 COMMD8Q9NX08 183 aa11.34□□□□□ -0.59
SRPRA-205ENST00000531104 ANAPC5Q9UJX4 755 aa11.34□□□□□ -0.59
SRPRA-205ENST00000531104 SCML2Q9UQR0 700 aa11.34□□□□□ -0.59
SRPRA-205ENST00000531104 PLAAQ9Y263 795 aa11.34□□□□□ -0.59
SRPRA-205ENST00000531104 MTMR11A4FU01 709 aa11.33□□□□□ -0.6
SRPRA-205ENST00000531104 CFAP69A5D8W1 941 aa11.33□□□□□ -0.6
SRPRA-205ENST00000531104 GOLGA8KD6RF30 607 aa11.33□□□□□ -0.6
SRPRA-205ENST00000531104 SGK1O00141 431 aa11.33□□□□□ -0.6
SRPRA-205ENST00000531104 CAPN9O14815 690 aa11.33□□□□□ -0.6
SRPRA-205ENST00000531104 MCF2LO15068 1137 aa11.33□□□□□ -0.6
SRPRA-205ENST00000531104 RBP3P10745 1247 aa11.33□□□□□ -0.6
SRPRA-205ENST00000531104 RPL22P35268 128 aaKnown RBP11.33□□□□□ -0.6
SRPRA-205ENST00000531104 CHKAP35790 457 aa11.33□□□□□ -0.6
SRPRA-205ENST00000531104 NR2C2P49116 596 aa11.33□□□□□ -0.6
SRPRA-205ENST00000531104 ZNF135P52742 658 aaPredicted RBP11.33□□□□□ -0.6
SRPRA-205ENST00000531104 YWHAGP61981 247 aaKnown RBP eCLIP11.33□□□□□ -0.6
SRPRA-205ENST00000531104 ROR1Q01973 937 aa11.33□□□□□ -0.6
SRPRA-205ENST00000531104 SLC10A2Q12908 348 aaPredicted RBP11.33□□□□□ -0.6
SRPRA-205ENST00000531104 DPYSQ14117 519 aa11.33□□□□□ -0.6
SRPRA-205ENST00000531104 MORF4L2Q15014 288 aa11.33□□□□□ -0.6
SRPRA-205ENST00000531104 P3H1Q32P28 736 aa11.33□□□□□ -0.6
SRPRA-205ENST00000531104 ARTNQ5T4W7 220 aa11.33□□□□□ -0.6
SRPRA-205ENST00000531104 NCBP2-AS2Q69YL0 99 aa11.33□□□□□ -0.6
SRPRA-205ENST00000531104 ANKS3Q6ZW76 656 aa11.33□□□□□ -0.6
SRPRA-205ENST00000531104 TRMT10CQ7L0Y3 403 aaKnown RBP11.33□□□□□ -0.6
SRPRA-205ENST00000531104 TAC4Q86UU9 113 aa11.33□□□□□ -0.6
SRPRA-205ENST00000531104 NUP93Q8N1F7 819 aa11.33□□□□□ -0.6
SRPRA-205ENST00000531104 PYROXD2Q8N2H3 581 aa11.33□□□□□ -0.6
SRPRA-205ENST00000531104 ZCCHC9Q8N567 271 aaKnown RBP11.33□□□□□ -0.6
SRPRA-205ENST00000531104 SPPL2BQ8TCT7 592 aa11.33□□□□□ -0.6
SRPRA-205ENST00000531104 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.33□□□□□ -0.6
SRPRA-205ENST00000531104 DQX1Q8TE96 717 aaKnown RBP11.33□□□□□ -0.6
SRPRA-205ENST00000531104 RNF139Q8WU17 664 aa11.33□□□□□ -0.6
SRPRA-205ENST00000531104 RIN2Q8WYP3 895 aaPredicted RBP11.33□□□□□ -0.6
SRPRA-205ENST00000531104 PKNOX2Q96KN3 472 aa11.33□□□□□ -0.6
SRPRA-205ENST00000531104 SPATA17Q96L03 361 aa11.33□□□□□ -0.6
SRPRA-205ENST00000531104 TTPALQ9BTX7 342 aa11.33□□□□□ -0.6
SRPRA-205ENST00000531104 VN1R3Q9BXE9 311 aa11.33□□□□□ -0.6
SRPRA-205ENST00000531104 ABCC13Q9NSE7 274 aa11.33□□□□□ -0.6
SRPRA-205ENST00000531104 ABI2Q9NYB9 513 aaPredicted RBP11.33□□□□□ -0.6
SRPRA-205ENST00000531104 MTRRQ9UBK8 725 aa11.33□□□□□ -0.6
SRPRA-205ENST00000531104 TPX2Q9ULW0 747 aaKnown RBP11.33□□□□□ -0.6
SRPRA-205ENST00000531104 ATP8A1Q9Y2Q0 1164 aa11.33□□□□□ -0.6
SRPRA-205ENST00000531104 FARP1Q9Y4F1 1045 aaPredicted RBP11.33□□□□□ -0.6
SRPRA-205ENST00000531104 BACE2Q9Y5Z0 518 aa11.33□□□□□ -0.6
SRPRA-205ENST00000531104 NT5C1B-RDH14C9J2C7 533 aa11.32□□□□□ -0.6
SRPRA-205ENST00000531104 H3BRJ5 948 aa11.32□□□□□ -0.6
SRPRA-205ENST00000531104 DCLK1O15075 740 aa11.32□□□□□ -0.6
SRPRA-205ENST00000531104 EFCAB14O75071 495 aa11.32□□□□□ -0.6
SRPRA-205ENST00000531104 AMHP03971 560 aa11.32□□□□□ -0.6
SRPRA-205ENST00000531104 HAPLN1P10915 354 aaPredicted RBP11.32□□□□□ -0.6
SRPRA-205ENST00000531104 GOT1P17174 413 aa11.32□□□□□ -0.6
SRPRA-205ENST00000531104 ARL4AP40617 200 aa11.32□□□□□ -0.6
SRPRA-205ENST00000531104 VPS41P49754 854 aa11.32□□□□□ -0.6
SRPRA-205ENST00000531104 PGFP49763 221 aa11.32□□□□□ -0.6
SRPRA-205ENST00000531104 ZNF844Q08AG5 666 aa11.32□□□□□ -0.6
SRPRA-205ENST00000531104 GPS1Q13098 491 aa11.32□□□□□ -0.6
SRPRA-205ENST00000531104 NME3Q13232 169 aa11.32□□□□□ -0.6
SRPRA-205ENST00000531104 PAFAH1B3Q15102 231 aaKnown RBP11.32□□□□□ -0.6
SRPRA-205ENST00000531104 HSP90B2PQ58FF3 399 aa11.32□□□□□ -0.6
SRPRA-205ENST00000531104 PPP6R3Q5H9R7 873 aaPredicted RBP11.32□□□□□ -0.6
SRPRA-205ENST00000531104 EFHC2Q5JST6 749 aa11.32□□□□□ -0.6
SRPRA-205ENST00000531104 SLC8B1Q6J4K2 584 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms