RNA–Protein interactions for RNA: ENST00000530886.5

CSDE1-214, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 3,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-214ENST00000530886 ILVBLA1L0T0 632 aa8.39□□□□□ -1.07
CSDE1-214ENST00000530886 DYTNA2CJ06 578 aa8.39□□□□□ -1.07
CSDE1-214ENST00000530886 SMCO2A6NFE2 343 aa8.39□□□□□ -1.07
CSDE1-214ENST00000530886 ZNF839A8K0R7 811 aa8.39□□□□□ -1.07
CSDE1-214ENST00000530886 NUAK1O60285 661 aa8.39□□□□□ -1.07
CSDE1-214ENST00000530886 GRIN3BO60391 1043 aa8.39□□□□□ -1.07
CSDE1-214ENST00000530886 TBCAO75347 108 aaKnown RBP8.39□□□□□ -1.07
CSDE1-214ENST00000530886 ALX3O95076 343 aa8.39□□□□□ -1.07
CSDE1-214ENST00000530886 CRYZL1O95825 349 aa8.39□□□□□ -1.07
CSDE1-214ENST00000530886 S100BP04271 92 aaPredicted RBP8.39□□□□□ -1.07
CSDE1-214ENST00000530886 CXCR2P25025 360 aa8.39□□□□□ -1.07
CSDE1-214ENST00000530886 POLR2BP30876 1174 aaKnown RBP8.39□□□□□ -1.07
CSDE1-214ENST00000530886 PSMC2P35998 433 aaKnown RBP8.39□□□□□ -1.07
CSDE1-214ENST00000530886 CDC20Q12834 499 aa8.39□□□□□ -1.07
CSDE1-214ENST00000530886 PDE1CQ14123 709 aaPredicted RBP8.39□□□□□ -1.07
CSDE1-214ENST00000530886 ZNF846Q147U1 533 aa8.39□□□□□ -1.07
CSDE1-214ENST00000530886 AARS2Q5JTZ9 985 aaKnown RBP8.39□□□□□ -1.07
CSDE1-214ENST00000530886 C12orf60Q5U649 245 aa8.39□□□□□ -1.07
CSDE1-214ENST00000530886 OSCARQ8IYS5 282 aa8.39□□□□□ -1.07
CSDE1-214ENST00000530886 ACMSDQ8TDX5 336 aa8.39□□□□□ -1.07
CSDE1-214ENST00000530886 SLC20A1Q8WUM9 679 aa8.39□□□□□ -1.07
CSDE1-214ENST00000530886 TTC9Q92623 222 aa8.39□□□□□ -1.07
CSDE1-214ENST00000530886 TTC17Q96AE7 1141 aa8.39□□□□□ -1.07
CSDE1-214ENST00000530886 ZNF486Q96H40 463 aaPredicted RBP8.39□□□□□ -1.07
CSDE1-214ENST00000530886 WNK4Q96J92 1243 aa8.39□□□□□ -1.07
CSDE1-214ENST00000530886 ACAP3Q96P50 834 aa8.39□□□□□ -1.07
CSDE1-214ENST00000530886 DCUN1D5Q9BTE7 237 aa8.39□□□□□ -1.07
CSDE1-214ENST00000530886 CXorf21Q9HAI6 301 aa8.39□□□□□ -1.07
CSDE1-214ENST00000530886 ACP6Q9NPH0 428 aa8.39□□□□□ -1.07
CSDE1-214ENST00000530886 PARVAQ9NVD7 372 aa8.39□□□□□ -1.07
CSDE1-214ENST00000530886 DMAC2Q9NW81 257 aa8.39□□□□□ -1.07
CSDE1-214ENST00000530886 DNMT3BQ9UBC3 853 aaKnown RBP8.39□□□□□ -1.07
CSDE1-214ENST00000530886 VPS51Q9UID3 782 aa8.39□□□□□ -1.07
CSDE1-214ENST00000530886 DSEQ9UL01 958 aa8.39□□□□□ -1.07
CSDE1-214ENST00000530886 ARHGAP26Q9UNA1 814 aa8.39□□□□□ -1.07
CSDE1-214ENST00000530886 CDC14AQ9UNH5 594 aa8.39□□□□□ -1.07
CSDE1-214ENST00000530886 PLLPQ9Y342 182 aa8.39□□□□□ -1.07
CSDE1-214ENST00000530886 FARP1Q9Y4F1 1045 aaPredicted RBP8.39□□□□□ -1.07
CSDE1-214ENST00000530886 QSER1Q2KHR3 1735 aa8.39□□□□□ -1.07
CSDE1-214ENST00000530886 C7orf72A4D263 438 aa8.38□□□□□ -1.07
CSDE1-214ENST00000530886 E9PMD0 336 aa8.38□□□□□ -1.07
CSDE1-214ENST00000530886 XPO1O14980 1071 aaKnown RBP8.38□□□□□ -1.07
CSDE1-214ENST00000530886 PSTPIP1O43586 416 aa8.38□□□□□ -1.07
CSDE1-214ENST00000530886 CD247P20963 164 aa8.38□□□□□ -1.07
CSDE1-214ENST00000530886 GLRA2P23416 452 aa8.38□□□□□ -1.07
CSDE1-214ENST00000530886 S100A5P33763 92 aa8.38□□□□□ -1.07
CSDE1-214ENST00000530886 KCNA1Q09470 495 aa8.38□□□□□ -1.07
CSDE1-214ENST00000530886 MGAT5BQ3V5L5 792 aa8.38□□□□□ -1.07
CSDE1-214ENST00000530886 C4orf22Q6V702 233 aa8.38□□□□□ -1.07
CSDE1-214ENST00000530886 NEK10Q6ZWH5 1172 aa8.38□□□□□ -1.07
CSDE1-214ENST00000530886 IFNLR1Q8IU57 520 aaPredicted RBP8.38□□□□□ -1.07
CSDE1-214ENST00000530886 TTC30BQ8N4P2 665 aa8.38□□□□□ -1.07
CSDE1-214ENST00000530886 GSDMBQ8TAX9 411 aa8.38□□□□□ -1.07
CSDE1-214ENST00000530886 TFB1MQ8WVM0 346 aaKnown RBP8.38□□□□□ -1.07
CSDE1-214ENST00000530886 RASSF5Q8WWW0 418 aa8.38□□□□□ -1.07
CSDE1-214ENST00000530886 GJA10Q969M2 543 aa8.38□□□□□ -1.07
CSDE1-214ENST00000530886 TP53INP1Q96A56 240 aa8.38□□□□□ -1.07
CSDE1-214ENST00000530886 DUS3LQ96G46 650 aaKnown RBP8.38□□□□□ -1.07
CSDE1-214ENST00000530886 SERAC1Q96JX3 654 aa8.38□□□□□ -1.07
CSDE1-214ENST00000530886 NACC1Q96RE7 527 aa8.38□□□□□ -1.07
CSDE1-214ENST00000530886 TMEM47Q9BQJ4 181 aa8.38□□□□□ -1.07
CSDE1-214ENST00000530886 KLHL25Q9H0H3 589 aa8.38□□□□□ -1.07
CSDE1-214ENST00000530886 CPVLQ9H3G5 476 aa8.38□□□□□ -1.07
CSDE1-214ENST00000530886 C12orf65Q9H3J6 166 aaKnown RBP8.38□□□□□ -1.07
CSDE1-214ENST00000530886 CNGB3Q9NQW8 809 aa8.38□□□□□ -1.07
CSDE1-214ENST00000530886 DAPK2Q9UIK4 370 aa8.38□□□□□ -1.07
CSDE1-214ENST00000530886 ATF5Q9Y2D1 282 aaPredicted RBP8.38□□□□□ -1.07
CSDE1-214ENST00000530886 GPR25O00155 361 aa8.38□□□□□ -1.07
CSDE1-214ENST00000530886 FOXN3O00409 490 aaPredicted RBP8.38□□□□□ -1.07
CSDE1-214ENST00000530886 PPP1R11O60927 126 aaPredicted RBP8.38□□□□□ -1.07
CSDE1-214ENST00000530886 SPAG6O75602 509 aa8.38□□□□□ -1.07
CSDE1-214ENST00000530886 CLPXO76031 633 aa8.38□□□□□ -1.07
CSDE1-214ENST00000530886 MYO1DO94832 1006 aa8.38□□□□□ -1.07
CSDE1-214ENST00000530886 SERPINB2P05120 415 aa8.38□□□□□ -1.07
CSDE1-214ENST00000530886 NCAM1P13591 858 aa8.38□□□□□ -1.07
CSDE1-214ENST00000530886 GYS1P13807 737 aa8.38□□□□□ -1.07
CSDE1-214ENST00000530886 PRKACBP22694 351 aa8.38□□□□□ -1.07
CSDE1-214ENST00000530886 NFATC3Q12968 1075 aa8.38□□□□□ -1.07
CSDE1-214ENST00000530886 SHROOM1Q2M3G4 852 aaPredicted RBP8.38□□□□□ -1.07
CSDE1-214ENST00000530886 TCHHL1Q5QJ38 904 aaPredicted RBP8.38□□□□□ -1.07
CSDE1-214ENST00000530886 CCDC81Q6ZN84 652 aa8.38□□□□□ -1.07
CSDE1-214ENST00000530886 ZNF598Q86UK7 904 aaKnown RBP8.38□□□□□ -1.07
CSDE1-214ENST00000530886 GPBP1Q86WP2 473 aa8.38□□□□□ -1.07
CSDE1-214ENST00000530886 THEMISQ8N1K5 641 aaPredicted RBP8.38□□□□□ -1.07
CSDE1-214ENST00000530886 CABLES1Q8TDN4 633 aa8.38□□□□□ -1.07
CSDE1-214ENST00000530886 SLC44A1Q8WWI5 657 aa8.38□□□□□ -1.07
CSDE1-214ENST00000530886 UHRF1Q96T88 793 aaPredicted RBP8.38□□□□□ -1.07
CSDE1-214ENST00000530886 PKP2Q99959 881 aa8.38□□□□□ -1.07
CSDE1-214ENST00000530886 GPN2Q9H9Y4 310 aaPredicted RBP8.38□□□□□ -1.07
CSDE1-214ENST00000530886 ALG13Q9NP73 1137 aaKnown RBP8.38□□□□□ -1.07
CSDE1-214ENST00000530886 THAP1Q9NVV9 213 aa8.38□□□□□ -1.07
CSDE1-214ENST00000530886 RBMX2Q9Y388 322 aaKnown RBP8.38□□□□□ -1.07
CSDE1-214ENST00000530886 TRAF6Q9Y4K3 522 aa8.38□□□□□ -1.07
CSDE1-214ENST00000530886 PTPRFP10586 1907 aa8.38□□□□□ -1.07
CSDE1-214ENST00000530886 A0A1W2PPW3 197 aa8.38□□□□□ -1.07
CSDE1-214ENST00000530886 USP17L3A6NCW0 530 aa8.38□□□□□ -1.07
CSDE1-214ENST00000530886 USP17L4A6NCW7 530 aa8.38□□□□□ -1.07
CSDE1-214ENST00000530886 GIPC1O14908 333 aa8.38□□□□□ -1.07
CSDE1-214ENST00000530886 EIF3DO15371 548 aaKnown RBP eCLIP8.38□□□□□ -1.07
CSDE1-214ENST00000530886 LIASO43766 372 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms