RNA–Protein interactions for RNA: ENST00000529540.5

NR1H3-231, Transcript of nuclear receptor subfamily 1 group H member 3, human

TSL 2

Gene NR1H3, Length 1,673 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1H3-231	ENST00000529540	GOLGA7B	Q2TAP0	167 aa		15.19	■□□□□ 0.02
NR1H3-231	ENST00000529540	UBAP2	Q5T6F2	1119 aa	Known RBP	15.19	■□□□□ 0.02
NR1H3-231	ENST00000529540	VSTM1	Q6UX27	236 aa		15.19	■□□□□ 0.02
NR1H3-231	ENST00000529540	SYDE1	Q6ZW31	735 aa	Predicted RBP	15.19	■□□□□ 0.02
NR1H3-231	ENST00000529540	TAS1R1	Q7RTX1	841 aa		15.19	■□□□□ 0.02
NR1H3-231	ENST00000529540	STK32A	Q8WU08	396 aa		15.19	■□□□□ 0.02
NR1H3-231	ENST00000529540	VCPIP1	Q96JH7	1222 aa		15.19	■□□□□ 0.02
NR1H3-231	ENST00000529540	PKMYT1	Q99640	499 aa		15.19	■□□□□ 0.02
NR1H3-231	ENST00000529540	RXFP1	Q9HBX9	757 aa		15.19	■□□□□ 0.02
NR1H3-231	ENST00000529540	PNPLA8	Q9NP80	782 aa		15.19	■□□□□ 0.02
NR1H3-231	ENST00000529540	ENTPD7	Q9NQZ7	604 aa		15.19	■□□□□ 0.02
NR1H3-231	ENST00000529540	YBX2	Q9Y2T7	364 aa	Known RBP	15.19	■□□□□ 0.02
NR1H3-231	ENST00000529540	PCDHB5	Q9Y5E4	795 aa		15.19	■□□□□ 0.02
NR1H3-231	ENST00000529540	CDY1	Q9Y6F8	540 aa		15.19	■□□□□ 0.02
NR1H3-231	ENST00000529540	MYBPHL	A2RUH7	354 aa		15.18	■□□□□ 0.02
NR1H3-231	ENST00000529540	SMIM23	A6NLE4	172 aa		15.18	■□□□□ 0.02
NR1H3-231	ENST00000529540	UBOX5	O94941	541 aa		15.18	■□□□□ 0.02
NR1H3-231	ENST00000529540	ADH1A	P07327	375 aa		15.18	■□□□□ 0.02
NR1H3-231	ENST00000529540	CHRM1	P11229	460 aa	Predicted RBP	15.18	■□□□□ 0.02
NR1H3-231	ENST00000529540	UNG	P13051	313 aa	Predicted RBP	15.18	■□□□□ 0.02
NR1H3-231	ENST00000529540	NPR3	P17342	541 aa		15.18	■□□□□ 0.02
NR1H3-231	ENST00000529540	DNAJB2	P25686	324 aa		15.18	■□□□□ 0.02
NR1H3-231	ENST00000529540	NOMO3	P69849	1222 aa		15.18	■□□□□ 0.02
NR1H3-231	ENST00000529540	LMNB2	Q03252	620 aa		15.18	■□□□□ 0.02
NR1H3-231	ENST00000529540	BNIP1	Q12981	228 aa		15.18	■□□□□ 0.02
NR1H3-231	ENST00000529540	SLC39A12	Q504Y0	691 aa		15.18	■□□□□ 0.02
NR1H3-231	ENST00000529540	RHBDF2	Q6PJF5	856 aa		15.18	■□□□□ 0.02
NR1H3-231	ENST00000529540	SPPL3	Q8TCT6	385 aa		15.18	■□□□□ 0.02
NR1H3-231	ENST00000529540	POF1B	Q8WVV4	589 aa		15.18	■□□□□ 0.02
NR1H3-231	ENST00000529540	MYLPF	Q96A32	169 aa		15.18	■□□□□ 0.02
NR1H3-231	ENST00000529540	B3GALT6	Q96L58	329 aa		15.18	■□□□□ 0.02
NR1H3-231	ENST00000529540	CEP295NL	Q96MC4	621 aa		15.18	■□□□□ 0.02
NR1H3-231	ENST00000529540	TCF25	Q9BQ70	676 aa		15.18	■□□□□ 0.02
NR1H3-231	ENST00000529540	DUSP16	Q9BY84	665 aa		15.18	■□□□□ 0.02
NR1H3-231	ENST00000529540	BATF3	Q9NR55	127 aa		15.18	■□□□□ 0.02
NR1H3-231	ENST00000529540	STRIP2	Q9ULQ0	834 aa		15.18	■□□□□ 0.02
NR1H3-231	ENST00000529540	HCRT	O43612	131 aa		15.17	■□□□□ 0.02
NR1H3-231	ENST00000529540	ECEL1	O95672	775 aa		15.17	■□□□□ 0.02
NR1H3-231	ENST00000529540	MYBL1	P10243	752 aa		15.17	■□□□□ 0.02
NR1H3-231	ENST00000529540	PYGM	P11217	842 aa		15.17	■□□□□ 0.02
NR1H3-231	ENST00000529540	CCDC130	P13994	396 aa		15.17	■□□□□ 0.02
NR1H3-231	ENST00000529540	ADORA2B	P29275	332 aa		15.17	■□□□□ 0.02
NR1H3-231	ENST00000529540	MAGEA11	P43364	429 aa		15.17	■□□□□ 0.02
NR1H3-231	ENST00000529540	ACADSB	P45954	432 aa		15.17	■□□□□ 0.02
NR1H3-231	ENST00000529540	PSEN1	P49768	467 aa		15.17	■□□□□ 0.02
NR1H3-231	ENST00000529540	CLNS1A	P54105	237 aa	Known RBP	15.17	■□□□□ 0.02
NR1H3-231	ENST00000529540	CALCOCO2	Q13137	446 aa		15.17	■□□□□ 0.02
NR1H3-231	ENST00000529540	GPM6B	Q13491	265 aa		15.17	■□□□□ 0.02
NR1H3-231	ENST00000529540	RAB33A	Q14088	237 aa		15.17	■□□□□ 0.02
NR1H3-231	ENST00000529540	LRIT3	Q3SXY7	679 aa		15.17	■□□□□ 0.02
NR1H3-231	ENST00000529540	ACAD10	Q6JQN1	1059 aa		15.17	■□□□□ 0.02
NR1H3-231	ENST00000529540	PRSS55	Q6UWB4	352 aa	Predicted RBP	15.17	■□□□□ 0.02
NR1H3-231	ENST00000529540	FAM35A	Q86V20	835 aa		15.17	■□□□□ 0.02
NR1H3-231	ENST00000529540	CCDC105	Q8IYK2	499 aa		15.17	■□□□□ 0.02
NR1H3-231	ENST00000529540	ZNF461	Q8TAF7	563 aa		15.17	■□□□□ 0.02
NR1H3-231	ENST00000529540	CKAP2	Q8WWK9	683 aa		15.17	■□□□□ 0.02
NR1H3-231	ENST00000529540	TIFA	Q96CG3	184 aa		15.17	■□□□□ 0.02
NR1H3-231	ENST00000529540	RSRC1	Q96IZ7	334 aa	Known RBP	15.17	■□□□□ 0.02
NR1H3-231	ENST00000529540	HSFY1	Q96LI6	401 aa		15.17	■□□□□ 0.02
NR1H3-231	ENST00000529540	NKX2-4	Q9H2Z4	354 aa		15.17	■□□□□ 0.02
NR1H3-231	ENST00000529540	CDC42EP4	Q9H3Q1	356 aa	Known RBP	15.17	■□□□□ 0.02
NR1H3-231	ENST00000529540	ECT2	Q9H8V3	914 aa		15.17	■□□□□ 0.02
NR1H3-231	ENST00000529540	DMAP1	Q9NPF5	467 aa	Predicted RBP	15.17	■□□□□ 0.02
NR1H3-231	ENST00000529540	AFF4	Q9UHB7	1163 aa	Known RBP	15.17	■□□□□ 0.02
NR1H3-231	ENST00000529540	C15orf41	Q9Y2V0	281 aa		15.17	■□□□□ 0.02
NR1H3-231	ENST00000529540	ARL2BP	Q9Y2Y0	163 aa		15.17	■□□□□ 0.02
NR1H3-231	ENST00000529540	VWA8	A3KMH1	1905 aa		15.17	■□□□□ 0.02
NR1H3-231	ENST00000529540	TMEM265	A0A087WTH1	108 aa		15.16	■□□□□ 0.02
NR1H3-231	ENST00000529540	ZC3H11B	A0A1B0GUI2	810 aa	Predicted RBP	15.16	■□□□□ 0.02
NR1H3-231	ENST00000529540	TMEM110-MUSTN1	A8MSY1	372 aa		15.16	■□□□□ 0.02
NR1H3-231	ENST00000529540	C2CD2L	O14523	706 aa		15.16	■□□□□ 0.02
NR1H3-231	ENST00000529540	FSCN2	O14926	492 aa		15.16	■□□□□ 0.02
NR1H3-231	ENST00000529540	XPO1	O14980	1071 aa	Known RBP	15.16	■□□□□ 0.02
NR1H3-231	ENST00000529540	CALB1	P05937	261 aa		15.16	■□□□□ 0.02
NR1H3-231	ENST00000529540	MAN1A1	P33908	653 aa		15.16	■□□□□ 0.02
NR1H3-231	ENST00000529540	OR1D2	P34982	312 aa		15.16	■□□□□ 0.02
NR1H3-231	ENST00000529540	PBX2	P40425	430 aa		15.16	■□□□□ 0.02
NR1H3-231	ENST00000529540	SKIV2L2	P42285	1042 aa	Known RBP	15.16	■□□□□ 0.02
NR1H3-231	ENST00000529540	GPD2	P43304	727 aa		15.16	■□□□□ 0.02
NR1H3-231	ENST00000529540	RWDD2B	P57060	319 aa		15.16	■□□□□ 0.02
NR1H3-231	ENST00000529540	ROR1	Q01973	937 aa		15.16	■□□□□ 0.02
NR1H3-231	ENST00000529540	CAV1	Q03135	178 aa		15.16	■□□□□ 0.02
NR1H3-231	ENST00000529540	C1QBP	Q07021	282 aa	Known RBP	15.16	■□□□□ 0.02
NR1H3-231	ENST00000529540	MESD	Q14696	234 aa		15.16	■□□□□ 0.02
NR1H3-231	ENST00000529540	PKDCC	Q504Y2	493 aa		15.16	■□□□□ 0.02
NR1H3-231	ENST00000529540	FAM133B	Q5BKY9	247 aa	Known RBP	15.16	■□□□□ 0.02
NR1H3-231	ENST00000529540	TBC1D1	Q86TI0	1168 aa	Predicted RBP	15.16	■□□□□ 0.02
NR1H3-231	ENST00000529540	PHF13	Q86YI8	300 aa	Predicted RBP	15.16	■□□□□ 0.02
NR1H3-231	ENST00000529540	B3GNT5	Q9BYG0	378 aa		15.16	■□□□□ 0.02
NR1H3-231	ENST00000529540	CSNK1G1	Q9HCP0	422 aa		15.16	■□□□□ 0.02
NR1H3-231	ENST00000529540	ALG13	Q9NP73	1137 aa	Known RBP	15.16	■□□□□ 0.02
NR1H3-231	ENST00000529540	KRT82	Q9NSB4	513 aa		15.16	■□□□□ 0.02
NR1H3-231	ENST00000529540	UVRAG	Q9P2Y5	699 aa		15.16	■□□□□ 0.02
NR1H3-231	ENST00000529540	PRKAG3	Q9UGI9	489 aa		15.16	■□□□□ 0.02
NR1H3-231	ENST00000529540	DPP7	Q9UHL4	492 aa		15.16	■□□□□ 0.02
NR1H3-231	ENST00000529540	LGALS13	Q9UHV8	139 aa		15.16	■□□□□ 0.02
NR1H3-231	ENST00000529540	GBF1	Q92538	1859 aa		15.16	■□□□□ 0.02
NR1H3-231	ENST00000529540	LILRB3	O75022	631 aa		15.16	■□□□□ 0.02
NR1H3-231	ENST00000529540	AP1G2	O75843	785 aa		15.16	■□□□□ 0.02
NR1H3-231	ENST00000529540	WFS1	O76024	890 aa		15.16	■□□□□ 0.02

Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms