RNA–Protein interactions for RNA: ENST00000528787.1

SSBP3-211, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-211ENST00000528787 TMEM59LQ9UK28 342 aa8.27□□□□□ -1.09
SSBP3-211ENST00000528787 GRXCR2A6NFK2 248 aa8.26□□□□□ -1.09
SSBP3-211ENST00000528787 TMEM191CA6NGB0 347 aa8.26□□□□□ -1.09
SSBP3-211ENST00000528787 C2CD4BA6NLJ0 364 aa8.26□□□□□ -1.09
SSBP3-211ENST00000528787 M0QYT0 321 aa8.26□□□□□ -1.09
SSBP3-211ENST00000528787 TULP2O00295 520 aa8.26□□□□□ -1.09
SSBP3-211ENST00000528787 PRPSAP2O60256 369 aa8.26□□□□□ -1.09
SSBP3-211ENST00000528787 KIF5CO60282 957 aa8.26□□□□□ -1.09
SSBP3-211ENST00000528787 TRUB2O95900 331 aaKnown RBP8.26□□□□□ -1.09
SSBP3-211ENST00000528787 LAMP2P13473 410 aa8.26□□□□□ -1.09
SSBP3-211ENST00000528787 SSTR3P32745 418 aaPredicted RBP8.26□□□□□ -1.09
SSBP3-211ENST00000528787 LTBRP36941 435 aa8.26□□□□□ -1.09
SSBP3-211ENST00000528787 SULT1E1P49888 294 aa8.26□□□□□ -1.09
SSBP3-211ENST00000528787 TBX4P57082 545 aa8.26□□□□□ -1.09
SSBP3-211ENST00000528787 USP46P62068 366 aa8.26□□□□□ -1.09
SSBP3-211ENST00000528787 PFKPQ01813 784 aa8.26□□□□□ -1.09
SSBP3-211ENST00000528787 PTP4A2Q12974 167 aa8.26□□□□□ -1.09
SSBP3-211ENST00000528787 MTMR3Q13615 1198 aa8.26□□□□□ -1.09
SSBP3-211ENST00000528787 PDGFRLQ15198 375 aa8.26□□□□□ -1.09
SSBP3-211ENST00000528787 TEAD2Q15562 447 aa8.26□□□□□ -1.09
SSBP3-211ENST00000528787 EFHC2Q5JST6 749 aa8.26□□□□□ -1.09
SSBP3-211ENST00000528787 C11orf63Q6NUN7 778 aa8.26□□□□□ -1.09
SSBP3-211ENST00000528787 LRRC31Q6UY01 552 aa8.26□□□□□ -1.09
SSBP3-211ENST00000528787 GPRIN1Q7Z2K8 1008 aa8.26□□□□□ -1.09
SSBP3-211ENST00000528787 TMEM139Q8IV31 216 aa8.26□□□□□ -1.09
SSBP3-211ENST00000528787 DEFB106AQ8N104 65 aa8.26□□□□□ -1.09
SSBP3-211ENST00000528787 UBL4BQ8N7F7 174 aa8.26□□□□□ -1.09
SSBP3-211ENST00000528787 C12orf76Q8N812 135 aaPredicted RBP8.26□□□□□ -1.09
SSBP3-211ENST00000528787 ZSCAN18Q8TBC5 510 aaPredicted RBP8.26□□□□□ -1.09
SSBP3-211ENST00000528787 SLC35G2Q8TBE7 412 aa8.26□□□□□ -1.09
SSBP3-211ENST00000528787 KIAA1524Q8TCG1 905 aa8.26□□□□□ -1.09
SSBP3-211ENST00000528787 NT5C3BQ969T7 300 aa8.26□□□□□ -1.09
SSBP3-211ENST00000528787 ELSPBP1Q96BH3 223 aa8.26□□□□□ -1.09
SSBP3-211ENST00000528787 NPY6RQ99463 290 aa8.26□□□□□ -1.09
SSBP3-211ENST00000528787 TMEM30AQ9NV96 361 aa8.26□□□□□ -1.09
SSBP3-211ENST00000528787 DDIT4Q9NX09 232 aa8.26□□□□□ -1.09
SSBP3-211ENST00000528787 TJP2Q9UDY2 1190 aa8.26□□□□□ -1.09
SSBP3-211ENST00000528787 RASAL2Q9UJF2 1139 aa8.26□□□□□ -1.09
SSBP3-211ENST00000528787 NENFQ9UMX5 172 aa8.26□□□□□ -1.09
SSBP3-211ENST00000528787 ADGRG1Q9Y653 693 aa8.26□□□□□ -1.09
SSBP3-211ENST00000528787 SLC12A8A0AV02 714 aa8.25□□□□□ -1.09
SSBP3-211ENST00000528787 MIF4GDA9UHW6 222 aaKnown RBP8.25□□□□□ -1.09
SSBP3-211ENST00000528787 H3BQ06 376 aaPredicted RBP8.25□□□□□ -1.09
SSBP3-211ENST00000528787 KIF2AO00139 706 aaPredicted RBP8.25□□□□□ -1.09
SSBP3-211ENST00000528787 PIK3R2O00459 728 aa8.25□□□□□ -1.09
SSBP3-211ENST00000528787 COCHO43405 550 aa8.25□□□□□ -1.09
SSBP3-211ENST00000528787 SPOPO43791 374 aa8.25□□□□□ -1.09
SSBP3-211ENST00000528787 PROSCO94903 275 aa8.25□□□□□ -1.09
SSBP3-211ENST00000528787 ENDOD1O94919 500 aa8.25□□□□□ -1.09
SSBP3-211ENST00000528787 NFATC1O95644 943 aa8.25□□□□□ -1.09
SSBP3-211ENST00000528787 CALCAP01258 141 aa8.25□□□□□ -1.09
SSBP3-211ENST00000528787 CFHP08603 1231 aa8.25□□□□□ -1.09
SSBP3-211ENST00000528787 PSMC3P17980 439 aa8.25□□□□□ -1.09
SSBP3-211ENST00000528787 RFC1P35251 1148 aaPredicted RBP8.25□□□□□ -1.09
SSBP3-211ENST00000528787 IFNAR2P48551 515 aa8.25□□□□□ -1.09
SSBP3-211ENST00000528787 CCZ1BP86790 482 aa8.25□□□□□ -1.09
SSBP3-211ENST00000528787 CCZ1P86791 482 aaPredicted RBP8.25□□□□□ -1.09
SSBP3-211ENST00000528787 EFEMP1Q12805 493 aa8.25□□□□□ -1.09
SSBP3-211ENST00000528787 CCDC142Q17RM4 750 aa8.25□□□□□ -1.09
SSBP3-211ENST00000528787 RABGAP1LQ5R372 815 aa8.25□□□□□ -1.09
SSBP3-211ENST00000528787 PPP1R15BQ5SWA1 713 aa8.25□□□□□ -1.09
SSBP3-211ENST00000528787 LRRC38Q5VT99 294 aa8.25□□□□□ -1.09
SSBP3-211ENST00000528787 TXNDC8Q6A555 127 aa8.25□□□□□ -1.09
SSBP3-211ENST00000528787 RAD9BQ6WBX8 426 aa8.25□□□□□ -1.09
SSBP3-211ENST00000528787 POLNQ7Z5Q5 900 aa8.25□□□□□ -1.09
SSBP3-211ENST00000528787 SCD5Q86SK9 330 aa8.25□□□□□ -1.09
SSBP3-211ENST00000528787 DAAM2Q86T65 1068 aa8.25□□□□□ -1.09
SSBP3-211ENST00000528787 VSIG1Q86XK7 387 aa8.25□□□□□ -1.09
SSBP3-211ENST00000528787 MIB1Q86YT6 1006 aa8.25□□□□□ -1.09
SSBP3-211ENST00000528787 ARID3BQ8IVW6 561 aaPredicted RBP8.25□□□□□ -1.09
SSBP3-211ENST00000528787 ADHFE1Q8IWW8 467 aa8.25□□□□□ -1.09
SSBP3-211ENST00000528787 NPAS3Q8IXF0 933 aa8.25□□□□□ -1.09
SSBP3-211ENST00000528787 HS6ST3Q8IZP7 471 aa8.25□□□□□ -1.09
SSBP3-211ENST00000528787 ARL14EPQ8N8R7 260 aaPredicted RBP8.25□□□□□ -1.09
SSBP3-211ENST00000528787 BPIFB1Q8TDL5 484 aa8.25□□□□□ -1.09
SSBP3-211ENST00000528787 DQX1Q8TE96 717 aaKnown RBP8.25□□□□□ -1.09
SSBP3-211ENST00000528787 RXFP2Q8WXD0 754 aa8.25□□□□□ -1.09
SSBP3-211ENST00000528787 EDEM1Q92611 657 aa8.25□□□□□ -1.09
SSBP3-211ENST00000528787 CENPIQ92674 756 aaPredicted RBP8.25□□□□□ -1.09
SSBP3-211ENST00000528787 IRF7Q92985 503 aa8.25□□□□□ -1.09
SSBP3-211ENST00000528787 ATP2A3Q93084 1043 aa8.25□□□□□ -1.09
SSBP3-211ENST00000528787 NTAN1Q96AB6 310 aa8.25□□□□□ -1.09
SSBP3-211ENST00000528787 ASB16Q96NS5 453 aa8.25□□□□□ -1.09
SSBP3-211ENST00000528787 HAPLN3Q96S86 360 aa8.25□□□□□ -1.09
SSBP3-211ENST00000528787 ZNF334Q9HCZ1 680 aaPredicted RBP8.25□□□□□ -1.09
SSBP3-211ENST00000528787 HAUS2Q9NVX0 235 aa8.25□□□□□ -1.09
SSBP3-211ENST00000528787 HCFC1R1Q9NWW0 138 aa8.25□□□□□ -1.09
SSBP3-211ENST00000528787 DDX56Q9NY93 547 aaKnown RBP8.25□□□□□ -1.09
SSBP3-211ENST00000528787 TAS2R14Q9NYV8 317 aa8.25□□□□□ -1.09
SSBP3-211ENST00000528787 STIM2Q9P246 746 aa8.25□□□□□ -1.09
SSBP3-211ENST00000528787 PPP2R2CQ9Y2T4 447 aa8.25□□□□□ -1.09
SSBP3-211ENST00000528787 BRWD1Q9NSI6 2320 aa8.25□□□□□ -1.09
SSBP3-211ENST00000528787 NOTCH4Q99466 2003 aa8.24□□□□□ -1.09
SSBP3-211ENST00000528787 TCRBV5S1A1TA0A578 114 aa8.24□□□□□ -1.09
SSBP3-211ENST00000528787 CCDC66A2RUB6 948 aa8.24□□□□□ -1.09
SSBP3-211ENST00000528787 MDM4O15151 490 aa8.24□□□□□ -1.09
SSBP3-211ENST00000528787 CHADO15335 359 aa8.24□□□□□ -1.09
SSBP3-211ENST00000528787 PSTPIP1O43586 416 aa8.24□□□□□ -1.09
SSBP3-211ENST00000528787 GRAP2O75791 330 aa8.24□□□□□ -1.09
SSBP3-211ENST00000528787 ADH1CP00326 375 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms