RNA–Protein interactions for RNA: ENST00000527720.5

USH1C-207, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,278 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-207ENST00000527720 AGGF1Q8N302 714 aaeCLIP15.91■□□□□ 0.14
USH1C-207ENST00000527720 B3GALNT2Q8NCR0 500 aa15.91■□□□□ 0.14
USH1C-207ENST00000527720 DUSP16Q9BY84 665 aa15.91■□□□□ 0.14
USH1C-207ENST00000527720 ADAM33Q9BZ11 813 aa15.91■□□□□ 0.14
USH1C-207ENST00000527720 XAB2Q9HCS7 855 aaKnown RBP15.91■□□□□ 0.14
USH1C-207ENST00000527720 SLCO1B3Q9NPD5 702 aa15.91■□□□□ 0.14
USH1C-207ENST00000527720 USP3Q9Y6I4 520 aa15.91■□□□□ 0.14
USH1C-207ENST00000527720 C17orf102A2RUQ5 167 aa15.9■□□□□ 0.14
USH1C-207ENST00000527720 LPXNO60711 386 aa15.9■□□□□ 0.14
USH1C-207ENST00000527720 AVILO75366 819 aa15.9■□□□□ 0.14
USH1C-207ENST00000527720 DHRS4L1P0CG22 281 aa15.9■□□□□ 0.14
USH1C-207ENST00000527720 ADRA1DP25100 572 aa15.9■□□□□ 0.14
USH1C-207ENST00000527720 HOXC8P31273 242 aa15.9■□□□□ 0.14
USH1C-207ENST00000527720 NEK3P51956 506 aa15.9■□□□□ 0.14
USH1C-207ENST00000527720 GBE1Q04446 702 aa15.9■□□□□ 0.14
USH1C-207ENST00000527720 SOX4Q06945 474 aaPredicted RBP15.9■□□□□ 0.14
USH1C-207ENST00000527720 SLC10A2Q12908 348 aaPredicted RBP15.9■□□□□ 0.14
USH1C-207ENST00000527720 MTM1Q13496 603 aa15.9■□□□□ 0.14
USH1C-207ENST00000527720 HEATR6Q6AI08 1181 aaKnown RBP15.9■□□□□ 0.14
USH1C-207ENST00000527720 SH2D5Q6ZV89 423 aa15.9■□□□□ 0.14
USH1C-207ENST00000527720 ASRGL1Q7L266 308 aa15.9■□□□□ 0.14
USH1C-207ENST00000527720 ZNF276Q8N554 614 aa15.9■□□□□ 0.14
USH1C-207ENST00000527720 SMG8Q8ND04 991 aaKnown RBP15.9■□□□□ 0.14
USH1C-207ENST00000527720 CCDC110Q8TBZ0 833 aa15.9■□□□□ 0.14
USH1C-207ENST00000527720 KCTD13Q8WZ19 329 aa15.9■□□□□ 0.14
USH1C-207ENST00000527720 SPOCK2Q92563 424 aa15.9■□□□□ 0.14
USH1C-207ENST00000527720 AP5M1Q9H0R1 490 aa15.9■□□□□ 0.14
USH1C-207ENST00000527720 RNF39Q9H2S5 420 aa15.9■□□□□ 0.14
USH1C-207ENST00000527720 TXLNGQ9NUQ3 528 aa15.9■□□□□ 0.14
USH1C-207ENST00000527720 FZD10Q9ULW2 581 aa15.9■□□□□ 0.14
USH1C-207ENST00000527720 KRT37O76014 449 aa15.89■□□□□ 0.13
USH1C-207ENST00000527720 SARNPP82979 210 aaKnown RBP15.89■□□□□ 0.13
USH1C-207ENST00000527720 SEMA5AQ13591 1074 aa15.89■□□□□ 0.13
USH1C-207ENST00000527720 ZNF618Q5T7W0 954 aa15.89■□□□□ 0.13
USH1C-207ENST00000527720 NCBP2-AS2Q69YL0 99 aa15.89■□□□□ 0.13
USH1C-207ENST00000527720 KCNT2Q6UVM3 1135 aa15.89■□□□□ 0.13
USH1C-207ENST00000527720 TBC1D1Q86TI0 1168 aaPredicted RBP15.89■□□□□ 0.13
USH1C-207ENST00000527720 PIGZQ86VD9 579 aa15.89■□□□□ 0.13
USH1C-207ENST00000527720 CCDC185Q8N715 623 aa15.89■□□□□ 0.13
USH1C-207ENST00000527720 KLHL29Q96CT2 875 aa15.89■□□□□ 0.13
USH1C-207ENST00000527720 CFAP36Q96G28 342 aa15.89■□□□□ 0.13
USH1C-207ENST00000527720 OLFM3Q96PB7 478 aa15.89■□□□□ 0.13
USH1C-207ENST00000527720 ARHGEF3Q9NR81 526 aa15.89■□□□□ 0.13
USH1C-207ENST00000527720 FLRT1Q9NZU1 646 aa15.89■□□□□ 0.13
USH1C-207ENST00000527720 SF3B1O75533 1304 aaKnown RBP eCLIP15.89■□□□□ 0.13
USH1C-207ENST00000527720 ZNF189O75820 626 aaPredicted RBP15.89■□□□□ 0.13
USH1C-207ENST00000527720 DGKIO75912 1065 aa15.89■□□□□ 0.13
USH1C-207ENST00000527720 UNC5CO95185 931 aa15.89■□□□□ 0.13
USH1C-207ENST00000527720 APOEP02649 317 aa15.89■□□□□ 0.13
USH1C-207ENST00000527720 MYL3P08590 195 aa15.89■□□□□ 0.13
USH1C-207ENST00000527720 NOS2P35228 1153 aa15.89■□□□□ 0.13
USH1C-207ENST00000527720 ATXN1P54253 815 aaKnown RBP15.89■□□□□ 0.13
USH1C-207ENST00000527720 CDK16Q00536 496 aa15.89■□□□□ 0.13
USH1C-207ENST00000527720 FAAP100Q0VG06 881 aa15.89■□□□□ 0.13
USH1C-207ENST00000527720 OTOAQ7RTW8 1153 aa15.89■□□□□ 0.13
USH1C-207ENST00000527720 BNIPLQ7Z465 357 aa15.89■□□□□ 0.13
USH1C-207ENST00000527720 TFB1MQ8WVM0 346 aaKnown RBP15.89■□□□□ 0.13
USH1C-207ENST00000527720 C10orf82Q8WW14 230 aa15.89■□□□□ 0.13
USH1C-207ENST00000527720 NT5C3BQ969T7 300 aa15.89■□□□□ 0.13
USH1C-207ENST00000527720 LRRC37BQ96QE4 947 aa15.89■□□□□ 0.13
USH1C-207ENST00000527720 DTLQ9NZJ0 730 aa15.89■□□□□ 0.13
USH1C-207ENST00000527720 PIAS1O75925 651 aa15.88■□□□□ 0.13
USH1C-207ENST00000527720 SNRPAP09012 282 aaKnown RBP15.88■□□□□ 0.13
USH1C-207ENST00000527720 TROVE2P10155 538 aaKnown RBP eCLIP15.88■□□□□ 0.13
USH1C-207ENST00000527720 NPR3P17342 541 aa15.88■□□□□ 0.13
USH1C-207ENST00000527720 TKTP29401 623 aaKnown RBP15.88■□□□□ 0.13
USH1C-207ENST00000527720 FDFT1P37268 417 aa15.88■□□□□ 0.13
USH1C-207ENST00000527720 ETV4P43268 484 aa15.88■□□□□ 0.13
USH1C-207ENST00000527720 SULT1E1P49888 294 aa15.88■□□□□ 0.13
USH1C-207ENST00000527720 MRPS5P82675 430 aaKnown RBP15.88■□□□□ 0.13
USH1C-207ENST00000527720 SYCP2LQ5T4T6 812 aa15.88■□□□□ 0.13
USH1C-207ENST00000527720 FAXCQ5TGI0 409 aa15.88■□□□□ 0.13
USH1C-207ENST00000527720 CYS1Q717R9 158 aa15.88■□□□□ 0.13
USH1C-207ENST00000527720 DEFB106AQ8N104 65 aa15.88■□□□□ 0.13
USH1C-207ENST00000527720 ANKLE1Q8NAG6 615 aa15.88■□□□□ 0.13
USH1C-207ENST00000527720 MTBPQ96DY7 904 aa15.88■□□□□ 0.13
USH1C-207ENST00000527720 SERAC1Q96JX3 654 aa15.88■□□□□ 0.13
USH1C-207ENST00000527720 SIGLEC10Q96LC7 697 aa15.88■□□□□ 0.13
USH1C-207ENST00000527720 MANSC1Q9H8J5 431 aa15.88■□□□□ 0.13
USH1C-207ENST00000527720 GOLGA2P5Q9HBQ8 144 aa15.88■□□□□ 0.13
USH1C-207ENST00000527720 RNF19AQ9NV58 838 aa15.88■□□□□ 0.13
USH1C-207ENST00000527720 CPA4Q9UI42 421 aa15.88■□□□□ 0.13
USH1C-207ENST00000527720 STAP1Q9ULZ2 295 aa15.88■□□□□ 0.13
USH1C-207ENST00000527720 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.88■□□□□ 0.13
USH1C-207ENST00000527720 MYO18AQ92614 2054 aaKnown RBP15.88■□□□□ 0.13
USH1C-207ENST00000527720 GOLGA8RI6L899 631 aa15.88■□□□□ 0.13
USH1C-207ENST00000527720 C2CD2LO14523 706 aa15.88■□□□□ 0.13
USH1C-207ENST00000527720 MAP3K6O95382 1288 aa15.88■□□□□ 0.13
USH1C-207ENST00000527720 METTL18O95568 372 aa15.88■□□□□ 0.13
USH1C-207ENST00000527720 ATP6V1G2O95670 118 aa15.88■□□□□ 0.13
USH1C-207ENST00000527720 IL1BP01584 269 aa15.88■□□□□ 0.13
USH1C-207ENST00000527720 MLNP12872 115 aa15.88■□□□□ 0.13
USH1C-207ENST00000527720 SLC8A1P32418 973 aa15.88■□□□□ 0.13
USH1C-207ENST00000527720 ADIGQ0VDE8 80 aa15.88■□□□□ 0.13
USH1C-207ENST00000527720 TAF2Q6P1X5 1199 aa15.88■□□□□ 0.13
USH1C-207ENST00000527720 ZNF534Q76KX8 674 aa15.88■□□□□ 0.13
USH1C-207ENST00000527720 PRPF39Q86UA1 669 aaKnown RBP15.88■□□□□ 0.13
USH1C-207ENST00000527720 OSTM1Q86WC4 334 aa15.88■□□□□ 0.13
USH1C-207ENST00000527720 GSDMBQ8TAX9 411 aa15.88■□□□□ 0.13
USH1C-207ENST00000527720 PPP1R13LQ8WUF5 828 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms