RNA–Protein interactions for RNA: ENST00000527467.5

CTNND1-216, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-216ENST00000527467 ILKAPQ9H0C8 392 aaPredicted RBP7.44□□□□□ -1.22
CTNND1-216ENST00000527467 GPR108Q9NPR9 543 aa7.44□□□□□ -1.22
CTNND1-216ENST00000527467 COMMD8Q9NX08 183 aa7.44□□□□□ -1.22
CTNND1-216ENST00000527467 PCSK1NQ9UHG2 260 aa7.44□□□□□ -1.22
CTNND1-216ENST00000527467 L1RE1Q9UN81 338 aa7.44□□□□□ -1.22
CTNND1-216ENST00000527467 RGSL1A5PLK6 1076 aa7.44□□□□□ -1.22
CTNND1-216ENST00000527467 ASMTLO95671 621 aa7.44□□□□□ -1.22
CTNND1-216ENST00000527467 LYNP07948 512 aa7.44□□□□□ -1.22
CTNND1-216ENST00000527467 NFICP08651 508 aa7.44□□□□□ -1.22
CTNND1-216ENST00000527467 AKR1B1P15121 316 aa7.44□□□□□ -1.22
CTNND1-216ENST00000527467 CCND2P30279 289 aa7.44□□□□□ -1.22
CTNND1-216ENST00000527467 CHI3L1P36222 383 aaPredicted RBP7.44□□□□□ -1.22
CTNND1-216ENST00000527467 CBX5P45973 191 aa7.44□□□□□ -1.22
CTNND1-216ENST00000527467 SCTRP47872 440 aa7.44□□□□□ -1.22
CTNND1-216ENST00000527467 VAC14Q08AM6 782 aa7.44□□□□□ -1.22
CTNND1-216ENST00000527467 GALNT3Q14435 633 aa7.44□□□□□ -1.22
CTNND1-216ENST00000527467 SNX17Q15036 470 aa7.44□□□□□ -1.22
CTNND1-216ENST00000527467 PHKG1Q16816 387 aa7.44□□□□□ -1.22
CTNND1-216ENST00000527467 ZC2HC1CQ53FD0 456 aaPredicted RBP7.44□□□□□ -1.22
CTNND1-216ENST00000527467 TBCELQ5QJ74 424 aa7.44□□□□□ -1.22
CTNND1-216ENST00000527467 WASHC2DQ5SRD0 308 aa7.44□□□□□ -1.22
CTNND1-216ENST00000527467 SLFN13Q68D06 897 aa7.44□□□□□ -1.22
CTNND1-216ENST00000527467 ANKS6Q68DC2 871 aa7.44□□□□□ -1.22
CTNND1-216ENST00000527467 NUDT18Q6ZVK8 323 aa7.44□□□□□ -1.22
CTNND1-216ENST00000527467 RAB11FIP2Q7L804 512 aa7.44□□□□□ -1.22
CTNND1-216ENST00000527467 TTC30AQ86WT1 665 aa7.44□□□□□ -1.22
CTNND1-216ENST00000527467 EID3Q8N140 333 aa7.44□□□□□ -1.22
CTNND1-216ENST00000527467 KBTBD8Q8NFY9 601 aa7.44□□□□□ -1.22
CTNND1-216ENST00000527467 KCTD4Q8WVF5 259 aa7.44□□□□□ -1.22
CTNND1-216ENST00000527467 KBTBD7Q8WVZ9 684 aa7.44□□□□□ -1.22
CTNND1-216ENST00000527467 ZNF577Q9BSK1 485 aa7.44□□□□□ -1.22
CTNND1-216ENST00000527467 RHOBTB2Q9BYZ6 727 aa7.44□□□□□ -1.22
CTNND1-216ENST00000527467 KLHL28Q9NXS3 571 aa7.44□□□□□ -1.22
CTNND1-216ENST00000527467 DBR1Q9UK59 544 aaKnown RBP7.44□□□□□ -1.22
CTNND1-216ENST00000527467 SLC30A1Q9Y6M5 507 aa7.44□□□□□ -1.22
CTNND1-216ENST00000527467 NKRFO15226 690 aaKnown RBP eCLIP7.44□□□□□ -1.22
CTNND1-216ENST00000527467 TMCC2O75069 709 aa7.44□□□□□ -1.22
CTNND1-216ENST00000527467 AOC2O75106 756 aa7.44□□□□□ -1.22
CTNND1-216ENST00000527467 WEE2P0C1S8 567 aa7.44□□□□□ -1.22
CTNND1-216ENST00000527467 C6orf222P0C671 652 aaPredicted RBP7.44□□□□□ -1.22
CTNND1-216ENST00000527467 PABPC1P11940 636 aaKnown RBP7.44□□□□□ -1.22
CTNND1-216ENST00000527467 PECAM1P16284 738 aaPredicted RBP7.44□□□□□ -1.22
CTNND1-216ENST00000527467 NOS3P29474 1203 aa7.44□□□□□ -1.22
CTNND1-216ENST00000527467 GSTT1P30711 240 aa7.44□□□□□ -1.22
CTNND1-216ENST00000527467 ADD1P35611 737 aaKnown RBP7.44□□□□□ -1.22
CTNND1-216ENST00000527467 NFYCQ13952 458 aa7.44□□□□□ -1.22
CTNND1-216ENST00000527467 ACCSLQ4AC99 568 aa7.44□□□□□ -1.22
CTNND1-216ENST00000527467 FAM98BQ52LJ0 330 aaKnown RBP7.44□□□□□ -1.22
CTNND1-216ENST00000527467 SGO1Q5FBB7 561 aa7.44□□□□□ -1.22
CTNND1-216ENST00000527467 TTC39BQ5VTQ0 682 aaPredicted RBP7.44□□□□□ -1.22
CTNND1-216ENST00000527467 LRRC71Q8N4P6 559 aa7.44□□□□□ -1.22
CTNND1-216ENST00000527467 MEIOBQ8N635 442 aa7.44□□□□□ -1.22
CTNND1-216ENST00000527467 MTMR14Q8NCE2 650 aa7.44□□□□□ -1.22
CTNND1-216ENST00000527467 MAGEE2Q8TD90 523 aaPredicted RBP7.44□□□□□ -1.22
CTNND1-216ENST00000527467 GPKOWQ92917 476 aaPredicted RBP eCLIP7.44□□□□□ -1.22
CTNND1-216ENST00000527467 TSEN34Q9BSV6 310 aaKnown RBP7.44□□□□□ -1.22
CTNND1-216ENST00000527467 INTS10Q9NVR2 710 aaKnown RBP7.44□□□□□ -1.22
CTNND1-216ENST00000527467 MCUBQ9NWR8 336 aa7.44□□□□□ -1.22
CTNND1-216ENST00000527467 AMACRQ9UHK6 382 aa7.44□□□□□ -1.22
CTNND1-216ENST00000527467 SIK3Q9Y2K2 1263 aa7.44□□□□□ -1.22
CTNND1-216ENST00000527467 HBS1LQ9Y450 684 aaKnown RBP7.44□□□□□ -1.22
CTNND1-216ENST00000527467 COMMD3-BMI1R4GMX3 469 aa7.44□□□□□ -1.22
CTNND1-216ENST00000527467 FAM25EA8MYX2 175 aa7.43□□□□□ -1.22
CTNND1-216ENST00000527467 FZD9O00144 591 aa7.43□□□□□ -1.22
CTNND1-216ENST00000527467 NCK2O43639 380 aa7.43□□□□□ -1.22
CTNND1-216ENST00000527467 NOS1APO75052 506 aaPredicted RBP7.43□□□□□ -1.22
CTNND1-216ENST00000527467 H2AFYO75367 372 aaKnown RBP7.43□□□□□ -1.22
CTNND1-216ENST00000527467 TCEA3O75764 348 aa7.43□□□□□ -1.22
CTNND1-216ENST00000527467 SOAT2O75908 522 aa7.43□□□□□ -1.22
CTNND1-216ENST00000527467 STAT3P40763 770 aa7.43□□□□□ -1.22
CTNND1-216ENST00000527467 SEC24CP53992 1094 aa7.43□□□□□ -1.22
CTNND1-216ENST00000527467 PTSQ03393 145 aa7.43□□□□□ -1.22
CTNND1-216ENST00000527467 PYDC2Q56P42 97 aa7.43□□□□□ -1.22
CTNND1-216ENST00000527467 PACS1Q6VY07 963 aa7.43□□□□□ -1.22
CTNND1-216ENST00000527467 ZNF605Q86T29 641 aa7.43□□□□□ -1.22
CTNND1-216ENST00000527467 TBATAQ96M53 351 aa7.43□□□□□ -1.22
CTNND1-216ENST00000527467 SERPINB12Q96P63 405 aa7.43□□□□□ -1.22
CTNND1-216ENST00000527467 MSTO1Q9BUK6 570 aa7.43□□□□□ -1.22
CTNND1-216ENST00000527467 GPN1Q9HCN4 374 aaPredicted RBP7.43□□□□□ -1.22
CTNND1-216ENST00000527467 ZNF221Q9UK13 617 aa7.43□□□□□ -1.22
CTNND1-216ENST00000527467 SLC9A8Q9Y2E8 581 aa7.43□□□□□ -1.22
CTNND1-216ENST00000527467 POLR1DQ9Y2S0 133 aa7.43□□□□□ -1.22
CTNND1-216ENST00000527467 C2CD2Q9Y426 696 aa7.43□□□□□ -1.22
CTNND1-216ENST00000527467 SPACA6W5XKT8 324 aa7.43□□□□□ -1.22
CTNND1-216ENST00000527467 SLIT3O75094 1523 aa7.43□□□□□ -1.22
CTNND1-216ENST00000527467 C2orf71A6NGG8 1288 aa7.43□□□□□ -1.22
CTNND1-216ENST00000527467 PLOD3O60568 738 aa7.43□□□□□ -1.22
CTNND1-216ENST00000527467 OR6B1O95007 311 aa7.43□□□□□ -1.22
CTNND1-216ENST00000527467 GTF2E2P29084 291 aaKnown RBP7.43□□□□□ -1.22
CTNND1-216ENST00000527467 PTPN7P35236 360 aa7.43□□□□□ -1.22
CTNND1-216ENST00000527467 SLC26A3P40879 764 aa7.43□□□□□ -1.22
CTNND1-216ENST00000527467 CEBPGP53567 150 aa7.43□□□□□ -1.22
CTNND1-216ENST00000527467 HIRAP54198 1017 aaPredicted RBP7.43□□□□□ -1.22
CTNND1-216ENST00000527467 HMGCS2P54868 508 aa7.43□□□□□ -1.22
CTNND1-216ENST00000527467 CDC42EP1Q00587 391 aa7.43□□□□□ -1.22
CTNND1-216ENST00000527467 CACNB1Q02641 598 aaPredicted RBP7.43□□□□□ -1.22
CTNND1-216ENST00000527467 SLC34A1Q06495 639 aa7.43□□□□□ -1.22
CTNND1-216ENST00000527467 TOP3AQ13472 1001 aaPredicted RBP7.43□□□□□ -1.22
CTNND1-216ENST00000527467 POLD3Q15054 466 aaPredicted RBP7.43□□□□□ -1.22
CTNND1-216ENST00000527467 P3H1Q32P28 736 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms