RNA–Protein interactions for RNA: ENST00000526425.1

USP35-201, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best) BASIC

Gene USP35, Length 3,770 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-201ENST00000526425 ZBTB16Q05516 673 aa10.22□□□□□ -0.77
USP35-201ENST00000526425 C1QBPQ07021 282 aaKnown RBP10.22□□□□□ -0.77
USP35-201ENST00000526425 PIGHQ14442 188 aaPredicted RBP10.22□□□□□ -0.77
USP35-201ENST00000526425 CENPUQ71F23 418 aa10.22□□□□□ -0.77
USP35-201ENST00000526425 MON1BQ7L1V2 547 aa10.22□□□□□ -0.77
USP35-201ENST00000526425 TREML1Q86YW5 311 aa10.22□□□□□ -0.77
USP35-201ENST00000526425 PPP1R14CQ8TAE6 165 aa10.22□□□□□ -0.77
USP35-201ENST00000526425 RXFP2Q8WXD0 754 aa10.22□□□□□ -0.77
USP35-201ENST00000526425 TMEM176AQ96HP8 235 aa10.22□□□□□ -0.77
USP35-201ENST00000526425 TWNKQ96RR1 684 aa10.22□□□□□ -0.77
USP35-201ENST00000526425 RNPEPL1Q9HAU8 725 aa10.22□□□□□ -0.77
USP35-201ENST00000526425 ASNSD1Q9NWL6 643 aa10.22□□□□□ -0.77
USP35-201ENST00000526425 NMRK1Q9NWW6 199 aa10.22□□□□□ -0.77
USP35-201ENST00000526425 PPME1Q9Y570 386 aa10.22□□□□□ -0.77
USP35-201ENST00000526425 DOCK5Q9H7D0 1870 aa10.22□□□□□ -0.77
USP35-201ENST00000526425 HCRTO43612 131 aa10.21□□□□□ -0.77
USP35-201ENST00000526425 KRT7P08729 469 aa10.21□□□□□ -0.77
USP35-201ENST00000526425 GSTA2P09210 222 aa10.21□□□□□ -0.77
USP35-201ENST00000526425 CD48P09326 243 aa10.21□□□□□ -0.77
USP35-201ENST00000526425 GHRP10912 638 aa10.21□□□□□ -0.77
USP35-201ENST00000526425 TNFRSF8P28908 595 aa10.21□□□□□ -0.77
USP35-201ENST00000526425 RABGGTBP53611 331 aa10.21□□□□□ -0.77
USP35-201ENST00000526425 BCAR1P56945 870 aa10.21□□□□□ -0.77
USP35-201ENST00000526425 MAP2K5Q13163 448 aa10.21□□□□□ -0.77
USP35-201ENST00000526425 SH3PXD2AQ5TCZ1 1133 aa10.21□□□□□ -0.77
USP35-201ENST00000526425 GLIS1Q8NBF1 620 aa10.21□□□□□ -0.77
USP35-201ENST00000526425 BEST2Q8NFU1 509 aa10.21□□□□□ -0.77
USP35-201ENST00000526425 AGAP3Q96P47 875 aa10.21□□□□□ -0.77
USP35-201ENST00000526425 EIF2AQ9BY44 585 aaKnown RBP10.21□□□□□ -0.77
USP35-201ENST00000526425 CEP41Q9BYV8 373 aa10.21□□□□□ -0.77
USP35-201ENST00000526425 MORF4L1Q9UBU8 362 aa10.21□□□□□ -0.77
USP35-201ENST00000526425 CCDC78A2IDD5 438 aa10.21□□□□□ -0.77
USP35-201ENST00000526425 KCNN4O15554 427 aa10.21□□□□□ -0.77
USP35-201ENST00000526425 RARGP13631 454 aa10.21□□□□□ -0.77
USP35-201ENST00000526425 VAV1P15498 845 aa10.21□□□□□ -0.77
USP35-201ENST00000526425 ENDOUP21128 410 aaKnown RBP10.21□□□□□ -0.77
USP35-201ENST00000526425 BDNFP23560 247 aa10.21□□□□□ -0.77
USP35-201ENST00000526425 MOGSQ13724 837 aa10.21□□□□□ -0.77
USP35-201ENST00000526425 IQSEC1Q6DN90 963 aa10.21□□□□□ -0.77
USP35-201ENST00000526425 IRGCQ6NXR0 463 aa10.21□□□□□ -0.77
USP35-201ENST00000526425 KLC3Q6P597 504 aa10.21□□□□□ -0.77
USP35-201ENST00000526425 LRRC43Q8N309 656 aa10.21□□□□□ -0.77
USP35-201ENST00000526425 BBOF1Q8ND07 529 aa10.21□□□□□ -0.77
USP35-201ENST00000526425 HASPINQ8TF76 798 aa10.21□□□□□ -0.77
USP35-201ENST00000526425 STK32AQ8WU08 396 aa10.21□□□□□ -0.77
USP35-201ENST00000526425 CFAP57Q96MR6 1250 aa10.21□□□□□ -0.77
USP35-201ENST00000526425 SYT11Q9BT88 431 aa10.21□□□□□ -0.77
USP35-201ENST00000526425 SPATA16Q9BXB7 569 aa10.21□□□□□ -0.77
USP35-201ENST00000526425 B3GNT5Q9BYG0 378 aa10.21□□□□□ -0.77
USP35-201ENST00000526425 LRRC4Q9HBW1 653 aa10.21□□□□□ -0.77
USP35-201ENST00000526425 AVENQ9NQS1 362 aaPredicted RBP10.21□□□□□ -0.77
USP35-201ENST00000526425 CNGB3Q9NQW8 809 aa10.21□□□□□ -0.77
USP35-201ENST00000526425 HACD3Q9P035 362 aa10.21□□□□□ -0.77
USP35-201ENST00000526425 KLHL14Q9P2G3 628 aa10.21□□□□□ -0.77
USP35-201ENST00000526425 STOML1Q9UBI4 398 aa10.21□□□□□ -0.77
USP35-201ENST00000526425 CPSF3Q9UKF6 684 aaKnown RBP10.21□□□□□ -0.77
USP35-201ENST00000526425 ZNF646O15015 1829 aaPredicted RBP10.21□□□□□ -0.78
USP35-201ENST00000526425 IL18RAPO95256 599 aa10.21□□□□□ -0.78
USP35-201ENST00000526425 APRTP07741 180 aa10.21□□□□□ -0.78
USP35-201ENST00000526425 MMP8P22894 467 aa10.21□□□□□ -0.78
USP35-201ENST00000526425 PTGIRP43119 386 aa10.21□□□□□ -0.78
USP35-201ENST00000526425 KPNA1P52294 538 aaPredicted RBP10.21□□□□□ -0.78
USP35-201ENST00000526425 ZNF792Q3KQV3 632 aa10.21□□□□□ -0.78
USP35-201ENST00000526425 TFDP3Q5H9I0 405 aa10.21□□□□□ -0.78
USP35-201ENST00000526425 CST9Q5W186 159 aa10.21□□□□□ -0.78
USP35-201ENST00000526425 ST13P4Q8IZP2 240 aaPredicted RBP10.21□□□□□ -0.78
USP35-201ENST00000526425 PDIK1LQ8N165 341 aa10.21□□□□□ -0.78
USP35-201ENST00000526425 PIP4K2CQ8TBX8 421 aa10.21□□□□□ -0.78
USP35-201ENST00000526425 PTPN18Q99952 460 aa10.21□□□□□ -0.78
USP35-201ENST00000526425 ZBED2Q9BTP6 218 aa10.21□□□□□ -0.78
USP35-201ENST00000526425 RAB6BQ9NRW1 208 aa10.21□□□□□ -0.78
USP35-201ENST00000526425 GRHL1Q9NZI5 618 aa10.21□□□□□ -0.78
USP35-201ENST00000526425 CNTNAP2Q9UHC6 1331 aa10.21□□□□□ -0.78
USP35-201ENST00000526425 PSTPIP1O43586 416 aa10.2□□□□□ -0.78
USP35-201ENST00000526425 HUS1O60921 280 aa10.2□□□□□ -0.78
USP35-201ENST00000526425 ACO1P21399 889 aaKnown RBP10.2□□□□□ -0.78
USP35-201ENST00000526425 YY1P25490 414 aa10.2□□□□□ -0.78
USP35-201ENST00000526425 MIPP30301 263 aa10.2□□□□□ -0.78
USP35-201ENST00000526425 RASSF2P50749 326 aa10.2□□□□□ -0.78
USP35-201ENST00000526425 C16orf72Q14CZ0 275 aa10.2□□□□□ -0.78
USP35-201ENST00000526425 HIF1AQ16665 826 aa10.2□□□□□ -0.78
USP35-201ENST00000526425 DUSP28Q4G0W2 176 aa10.2□□□□□ -0.78
USP35-201ENST00000526425 ZNF362Q5T0B9 420 aaPredicted RBP10.2□□□□□ -0.78
USP35-201ENST00000526425 OR52E8Q6IFG1 317 aa10.2□□□□□ -0.78
USP35-201ENST00000526425 ZDHHC24Q6UX98 284 aa10.2□□□□□ -0.78
USP35-201ENST00000526425 DCLK2Q8N568 766 aa10.2□□□□□ -0.78
USP35-201ENST00000526425 EXD1Q8NHP7 514 aa10.2□□□□□ -0.78
USP35-201ENST00000526425 PPTC7Q8NI37 304 aa10.2□□□□□ -0.78
USP35-201ENST00000526425 NDRG1Q92597 394 aaKnown RBP10.2□□□□□ -0.78
USP35-201ENST00000526425 PDLIM7Q9NR12 457 aa10.2□□□□□ -0.78
USP35-201ENST00000526425 TUBA8Q9NY65 449 aaPredicted RBP10.2□□□□□ -0.78
USP35-201ENST00000526425 FSCN2O14926 492 aa10.2□□□□□ -0.78
USP35-201ENST00000526425 CCDC130P13994 396 aa10.2□□□□□ -0.78
USP35-201ENST00000526425 SAT1P21673 171 aa10.2□□□□□ -0.78
USP35-201ENST00000526425 VARSP26640 1264 aaKnown RBP10.2□□□□□ -0.78
USP35-201ENST00000526425 MZF1P28698 734 aaPredicted RBP10.2□□□□□ -0.78
USP35-201ENST00000526425 ARFIP2P53365 341 aa10.2□□□□□ -0.78
USP35-201ENST00000526425 GNASQ5JWF2 1037 aa10.2□□□□□ -0.78
USP35-201ENST00000526425 MFSD14CQ5VZR4 134 aa10.2□□□□□ -0.78
USP35-201ENST00000526425 CCDC62Q6P9F0 684 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms