RNA–Protein interactions for RNA: ENST00000525916.1

CCDC90B-205, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 656 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-205ENST00000525916 KLF16Q9BXK1 252 aaPredicted RBP13.19□□□□□ -0.3
CCDC90B-205ENST00000525916 DMAP1Q9NPF5 467 aaPredicted RBP13.19□□□□□ -0.3
CCDC90B-205ENST00000525916 IL37Q9NZH6 218 aa13.19□□□□□ -0.3
CCDC90B-205ENST00000525916 WDR35Q9P2L0 1181 aa13.19□□□□□ -0.3
CCDC90B-205ENST00000525916 NYNRINQ9P2P1 1898 aaKnown RBP13.19□□□□□ -0.3
CCDC90B-205ENST00000525916 ATP8B3O60423 1300 aa13.18□□□□□ -0.3
CCDC90B-205ENST00000525916 FAM92AA1XBS5 289 aa13.18□□□□□ -0.3
CCDC90B-205ENST00000525916 FRMD3A2A2Y4 597 aa13.18□□□□□ -0.3
CCDC90B-205ENST00000525916 KIAA0391O15091 583 aaKnown RBP13.18□□□□□ -0.3
CCDC90B-205ENST00000525916 DLATP10515 647 aaKnown RBP13.18□□□□□ -0.3
CCDC90B-205ENST00000525916 IL12RB1P42701 662 aa13.18□□□□□ -0.3
CCDC90B-205ENST00000525916 SMAD1Q15797 465 aaKnown RBP13.18□□□□□ -0.3
CCDC90B-205ENST00000525916 PTPRNQ16849 979 aa13.18□□□□□ -0.3
CCDC90B-205ENST00000525916 SV2BQ7L1I2 683 aa13.18□□□□□ -0.3
CCDC90B-205ENST00000525916 TMPRSS6Q8IU80 811 aa13.18□□□□□ -0.3
CCDC90B-205ENST00000525916 SIPA1Q96FS4 1042 aa13.18□□□□□ -0.3
CCDC90B-205ENST00000525916 SMYD3Q9H7B4 428 aa13.18□□□□□ -0.3
CCDC90B-205ENST00000525916 KRT82Q9NSB4 513 aa13.18□□□□□ -0.3
CCDC90B-205ENST00000525916 HSPBP1Q9NZL4 362 aa13.18□□□□□ -0.3
CCDC90B-205ENST00000525916 NXF1Q9UBU9 619 aaKnown RBP13.18□□□□□ -0.3
CCDC90B-205ENST00000525916 LSM7Q9UK45 103 aaKnown RBP13.18□□□□□ -0.3
CCDC90B-205ENST00000525916 SNX11Q9Y5W9 270 aa13.18□□□□□ -0.3
CCDC90B-205ENST00000525916 TK2O00142 265 aa13.17□□□□□ -0.3
CCDC90B-205ENST00000525916 PLK4O00444 970 aa13.17□□□□□ -0.3
CCDC90B-205ENST00000525916 MDM4O15151 490 aa13.17□□□□□ -0.3
CCDC90B-205ENST00000525916 ATXN7O15265 892 aaPredicted RBP13.17□□□□□ -0.3
CCDC90B-205ENST00000525916 TNFSF14O43557 240 aa13.17□□□□□ -0.3
CCDC90B-205ENST00000525916 CUTAO60888 179 aa13.17□□□□□ -0.3
CCDC90B-205ENST00000525916 AP1G2O75843 785 aa13.17□□□□□ -0.3
CCDC90B-205ENST00000525916 FAM163BP0C2L3 166 aa13.17□□□□□ -0.3
CCDC90B-205ENST00000525916 HLA-EP13747 358 aa13.17□□□□□ -0.3
CCDC90B-205ENST00000525916 TNNI1P19237 187 aa13.17□□□□□ -0.3
CCDC90B-205ENST00000525916 OXTRP30559 389 aa13.17□□□□□ -0.3
CCDC90B-205ENST00000525916 CDH8P55286 799 aa13.17□□□□□ -0.3
CCDC90B-205ENST00000525916 CLDN6P56747 220 aa13.17□□□□□ -0.3
CCDC90B-205ENST00000525916 MYL6P60660 151 aa13.17□□□□□ -0.3
CCDC90B-205ENST00000525916 GEN1Q17RS7 908 aa13.17□□□□□ -0.3
CCDC90B-205ENST00000525916 KIF19Q2TAC6 998 aa13.17□□□□□ -0.3
CCDC90B-205ENST00000525916 RRAGBQ5VZM2 374 aa13.17□□□□□ -0.3
CCDC90B-205ENST00000525916 LAYNQ6UX15 382 aa13.17□□□□□ -0.3
CCDC90B-205ENST00000525916 FAM124AQ86V42 546 aa13.17□□□□□ -0.3
CCDC90B-205ENST00000525916 RDH13Q8NBN7 331 aa13.17□□□□□ -0.3
CCDC90B-205ENST00000525916 ZMIZ2Q8NF64 920 aa13.17□□□□□ -0.3
CCDC90B-205ENST00000525916 PRCCQ92733 491 aaPredicted RBP13.17□□□□□ -0.3
CCDC90B-205ENST00000525916 SMARCD1Q96GM5 515 aa13.17□□□□□ -0.3
CCDC90B-205ENST00000525916 CLIC6Q96NY7 704 aa13.17□□□□□ -0.3
CCDC90B-205ENST00000525916 SCAND2PQ9GZW5 306 aaPredicted RBP13.17□□□□□ -0.3
CCDC90B-205ENST00000525916 PRORYQ9H606 182 aa13.17□□□□□ -0.3
CCDC90B-205ENST00000525916 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.17□□□□□ -0.3
CCDC90B-205ENST00000525916 PANK4Q9NVE7 773 aa13.17□□□□□ -0.3
CCDC90B-205ENST00000525916 CCDC39Q9UFE4 941 aa13.17□□□□□ -0.3
CCDC90B-205ENST00000525916 CYSRT1A8MQ03 144 aa13.16□□□□□ -0.3
CCDC90B-205ENST00000525916 KCNK3O14649 394 aa13.16□□□□□ -0.3
CCDC90B-205ENST00000525916 BEST1O76090 585 aa13.16□□□□□ -0.3
CCDC90B-205ENST00000525916 IGLV3-19P01714 112 aa13.16□□□□□ -0.3
CCDC90B-205ENST00000525916 ACADMP11310 421 aa13.16□□□□□ -0.3
CCDC90B-205ENST00000525916 CCDC130P13994 396 aa13.16□□□□□ -0.3
CCDC90B-205ENST00000525916 PRKCHP24723 683 aa13.16□□□□□ -0.3
CCDC90B-205ENST00000525916 GRK6P43250 576 aa13.16□□□□□ -0.3
CCDC90B-205ENST00000525916 AFF3P51826 1226 aaKnown RBP13.16□□□□□ -0.3
CCDC90B-205ENST00000525916 COPAP53621 1224 aa13.16□□□□□ -0.3
CCDC90B-205ENST00000525916 GOLGA8FQ08AF8 430 aa13.16□□□□□ -0.3
CCDC90B-205ENST00000525916 GOLGA8DPQ0D2H9 430 aa13.16□□□□□ -0.3
CCDC90B-205ENST00000525916 ENPP2Q13822 863 aa13.16□□□□□ -0.3
CCDC90B-205ENST00000525916 SUZ12Q15022 739 aaKnown RBP13.16□□□□□ -0.3
CCDC90B-205ENST00000525916 SNRNP35Q16560 246 aaKnown RBP13.16□□□□□ -0.3
CCDC90B-205ENST00000525916 SCARA5Q6ZMJ2 495 aa13.16□□□□□ -0.3
CCDC90B-205ENST00000525916 Q6ZNB5 142 aa13.16□□□□□ -0.3
CCDC90B-205ENST00000525916 FUKQ8N0W3 1084 aa13.16□□□□□ -0.3
CCDC90B-205ENST00000525916 HPS3Q969F9 1004 aa13.16□□□□□ -0.3
CCDC90B-205ENST00000525916 ELMO3Q96BJ8 720 aa13.16□□□□□ -0.3
CCDC90B-205ENST00000525916 CCDC127Q96BQ5 260 aa13.16□□□□□ -0.3
CCDC90B-205ENST00000525916 SPATA32Q96LK8 384 aa13.16□□□□□ -0.3
CCDC90B-205ENST00000525916 CGRRF1Q99675 332 aa13.16□□□□□ -0.3
CCDC90B-205ENST00000525916 SMOQ99835 787 aa13.16□□□□□ -0.3
CCDC90B-205ENST00000525916 NUP58Q9BVL2 599 aa13.16□□□□□ -0.3
CCDC90B-205ENST00000525916 XYLT2Q9H1B5 865 aa13.16□□□□□ -0.3
CCDC90B-205ENST00000525916 TLR8Q9NR97 1041 aaKnown RBP13.16□□□□□ -0.3
CCDC90B-205ENST00000525916 COMMD8Q9NX08 183 aa13.16□□□□□ -0.3
CCDC90B-205ENST00000525916 OSER1Q9NX31 292 aa13.16□□□□□ -0.3
CCDC90B-205ENST00000525916 THAP10Q9P2Z0 257 aaPredicted RBP13.16□□□□□ -0.3
CCDC90B-205ENST00000525916 FBXO10Q9UK96 956 aa13.16□□□□□ -0.3
CCDC90B-205ENST00000525916 NUDT5Q9UKK9 219 aa13.16□□□□□ -0.3
CCDC90B-205ENST00000525916 PCDHA7Q9UN72 937 aa13.16□□□□□ -0.3
CCDC90B-205ENST00000525916 ANKRD6Q9Y2G4 727 aa13.16□□□□□ -0.3
CCDC90B-205ENST00000525916 SLC27A6Q9Y2P4 619 aa13.16□□□□□ -0.3
CCDC90B-205ENST00000525916 ATMQ13315 3056 aa13.16□□□□□ -0.3
CCDC90B-205ENST00000525916 TENM4Q6N022 2769 aa13.15□□□□□ -0.3
CCDC90B-205ENST00000525916 E9PAM4 449 aa13.15□□□□□ -0.3
CCDC90B-205ENST00000525916 CYP26A1O43174 497 aa13.15□□□□□ -0.3
CCDC90B-205ENST00000525916 TLX3O43711 291 aaPredicted RBP13.15□□□□□ -0.3
CCDC90B-205ENST00000525916 SYNCRIPO60506 623 aaKnown RBP13.15□□□□□ -0.3
CCDC90B-205ENST00000525916 ACO1P21399 889 aaKnown RBP13.15□□□□□ -0.3
CCDC90B-205ENST00000525916 HOXD13P35453 343 aa13.15□□□□□ -0.3
CCDC90B-205ENST00000525916 ATP5C1P36542 298 aaKnown RBP13.15□□□□□ -0.3
CCDC90B-205ENST00000525916 CCT8P50990 548 aa13.15□□□□□ -0.3
CCDC90B-205ENST00000525916 MFAP3P55082 362 aa13.15□□□□□ -0.3
CCDC90B-205ENST00000525916 IL9RQ01113 521 aa13.15□□□□□ -0.3
CCDC90B-205ENST00000525916 ORC1Q13415 861 aa13.15□□□□□ -0.3
CCDC90B-205ENST00000525916 TRPC3Q13507 836 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms